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PDB: 22202 件

5LTE
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Crystal structure of the alpha subunit of heme dependent oxidative N-demethylase (HODM)
分子名称: 2-ETHOXYETHANOL, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
著者Ortmayer, M, Leys, D.
登録日2016-09-06
公開日2016-11-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献An oxidative N-demethylase reveals PAS transition from ubiquitous sensor to enzyme.
Nature, 539, 2016
3WDB
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BU of 3wdb by Molmil
N-terminal domain of Mycobacterium tuberculosis ClpC1
分子名称: FORMIC ACID, Probable ATP-dependent Clp protease ATP-binding subunit
著者Vasudevan, D, Noble, C.G.
登録日2013-06-14
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Structural basis of mycobacterial inhibition by cyclomarin A
J.Biol.Chem., 288, 2013
5LW6
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BU of 5lw6 by Molmil
Crystal structure of a Se-Met substituted Dictyostelium discoideum ADP-ribose binding macrodomain (residues 342-563) of DDB_G0293866
分子名称: DDB_G0293866
著者Leys, D, Barkauskaite, E, Pinero, B.B, Ahel, I.
登録日2016-09-15
公開日2016-09-28
最終更新日2016-10-26
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The role of ADP-ribosylation in regulating DNA interstrand crosslink repair.
J.Cell.Sci., 129, 2016
5LCY
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BU of 5lcy by Molmil
Formaldehyde-Responsive Regulator FrmR E64H variant from Salmonella enterica serovar Typhimurium
分子名称: Frmr
著者Pohl, E, Robinson, N, Osman, D, Piergentili, C, Uson, I.
登録日2016-06-22
公開日2016-08-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The Effectors and Sensory Sites of Formaldehyde-responsive Regulator FrmR and Metal-sensing Variant.
J.Biol.Chem., 291, 2016
3WG1
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BU of 3wg1 by Molmil
Crystal structure of Agrocybe cylindracea galectin with lactose
分子名称: Galactoside-binding lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R.
登録日2013-07-25
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity.
Febs Lett., 587, 2013
5LGG
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BU of 5lgg by Molmil
The N-terminal WD40 domain of Apc1 (Anaphase promoting complex subunit 1)
分子名称: Anaphase-promoting complex subunit 1,Anaphase-promoting complex subunit 1,Anaphase-promoting complex subunit 1,Anaphase-promoting complex subunit 1
著者Li, Q, Aibara, S, Barford, D.
登録日2016-07-07
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献WD40 domain of Apc1 is critical for the coactivator-induced allosteric transition that stimulates APC/C catalytic activity.
Proc.Natl.Acad.Sci.USA, 113, 2016
7VMH
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BU of 7vmh by Molmil
Crystal structure of Arabidopsis thaliana HDT4
分子名称: Histone deacetylase HDT4
著者Bobde, R.C, Kumar, A, Vasudevan, D.
登録日2021-10-08
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Plant-specific HDT family histone deacetylases are nucleoplasmins.
Plant Cell, 34, 2022
3NWZ
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BU of 3nwz by Molmil
Crystal Structure of BH2602 protein from Bacillus halodurans with CoA, Northeast Structural Genomics Consortium Target BhR199
分子名称: BH2602 protein, COENZYME A, SULFATE ION
著者Kuzin, A, Su, M, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Lee, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2010-07-12
公開日2010-09-08
最終更新日2012-02-22
実験手法X-RAY DIFFRACTION (2.566 Å)
主引用文献Northeast Structural Genomics Consortium Target BhR199
To be published
7V7B
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BU of 7v7b by Molmil
CryoEM structure of DDB1-VprBP complex in ARM-up conformation
分子名称: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1
著者Wang, D, Xu, J, Liu, Q, Xiang, Y.
登録日2021-08-21
公開日2022-08-31
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural insights into the HIV-1 Vpr mediated ubiquitination through the Cullin-RING E3 ubiquitin ligase
To Be Published
1BJT
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BU of 1bjt by Molmil
TOPOISOMERASE II RESIDUES 409-1201
分子名称: TOPOISOMERASE II
著者Fass, D, Bogden, C.E, Berger, J.M.
登録日1998-06-29
公開日1999-05-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Quaternary changes in topoisomerase II may direct orthogonal movement of two DNA strands.
Nat.Struct.Biol., 6, 1999
5LI8
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BU of 5li8 by Molmil
Crystal structure of Mycobacterium tuberculosis CYP126A1 in complex with ketoconazole
分子名称: 1-acetyl-4-(4-{[(2R,4S)-2-(2,4-dichlorophenyl)-2-(1H-imidazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy}phenyl)piperazine, PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450 126
著者Levy, C, Munro, A.W, Leys, D.
登録日2016-07-14
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural Characterization and Ligand/Inhibitor Identification Provide Functional Insights into the Mycobacterium tuberculosis Cytochrome P450 CYP126A1.
J. Biol. Chem., 292, 2017
4L40
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Structure of the P450 OleT with a C20 fatty acid substrate bound
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Terminal olefin-forming fatty acid decarboxylase, icosanoic acid
著者Leys, D.
登録日2013-06-07
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and Biochemical Properties of the Alkene Producing Cytochrome P450 OleTJE (CYP152L1) from the Jeotgalicoccus sp. 8456 Bacterium.
J.Biol.Chem., 289, 2014
7VMI
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BU of 7vmi by Molmil
Crystal structure of Arabidopsis thaliana HDT3
分子名称: Histone deacetylase HDT3
著者Bobde, R.C, Kumar, A, Vasudevan, D.
登録日2021-10-08
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Plant-specific HDT family histone deacetylases are nucleoplasmins.
Plant Cell, 34, 2022
5LV1
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BU of 5lv1 by Molmil
2.12 A resolution structure of PtxB from Prochlorococcus marinus (MIT 9301) in complex with phosphite
分子名称: PtxB, oxidanylphosphinate
著者Bisson, C, Adams, N.B.P, Polyviou, D, Bibby, T.S, Hunter, C.N, Hitchcock, A.
登録日2016-09-12
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献The molecular basis of phosphite and hypophosphite recognition by ABC-transporters.
Nat Commun, 8, 2017
7VRR
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BU of 7vrr by Molmil
Crystal structure of Arabidopsis thaliana HDT1
分子名称: Histone deacetylase HDT1
著者Kumar, A, Bobde, R.C, Vasudevan, D.
登録日2021-10-23
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Plant-specific HDT family histone deacetylases are nucleoplasmins.
Plant Cell, 34, 2022
5M3V
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BU of 5m3v by Molmil
BEAT Fc
分子名称: Ig gamma-1 chain C region, Ig gamma-1 chain C region,Ig gamma-3 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Skegro, D, Stutz, C, Bourquin, F, Blein, S.
登録日2016-10-17
公開日2017-05-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Immunoglobulin domain interface exchange as a platform technology for the generation of Fc heterodimers and bispecific antibodies.
J. Biol. Chem., 292, 2017
5LYS
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BU of 5lys by Molmil
The crystal structure of 7SK 5'-hairpin - Gold derivative
分子名称: 7SK RNA, GOLD ION, MAGNESIUM ION, ...
著者Martinez-Zapien, D, Legrand, P, McEwen, A.G, Pasquali, S, Dock-Bregeon, A.-C.
登録日2016-09-28
公開日2017-01-25
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献The crystal structure of the 5 functional domain of the transcription riboregulator 7SK.
Nucleic Acids Res., 45, 2017
6AYE
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BU of 6aye by Molmil
Human apo-TRPML3 channel at pH 7.4
分子名称: Mucolipin-3
著者Zhou, X, Li, M, Su, D, Jia, Q, Li, H, Li, X, Yang, J.
登録日2017-09-08
公開日2017-11-08
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.06 Å)
主引用文献Cryo-EM structures of the human endolysosomal TRPML3 channel in three distinct states.
Nat. Struct. Mol. Biol., 24, 2017
6AZ1
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BU of 6az1 by Molmil
Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
分子名称: E-site tRNA, LACK1, MAGNESIUM ION, ...
著者Shalev-Benami, M, Zhang, Y, Rozenberg, H, Matzov, D, Zimmerman, E, Bashan, A, Jaffe, C.L, Yonath, A, Skiniotis, G.
登録日2017-09-09
公開日2017-12-06
最終更新日2019-07-03
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Atomic resolution snapshot of Leishmania ribosome inhibition by the aminoglycoside paromomycin.
Nat Commun, 8, 2017
3O8Z
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BU of 3o8z by Molmil
Crystal structure of Spn1 (Iws1) core domain
分子名称: SULFATE ION, Transcription factor IWS1
著者McDonald, S.M, Close, D, Hill, C.P.
登録日2010-08-03
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure and biological importance of the spn1-spt6 interaction, and its regulatory role in nucleosome binding.
Mol.Cell, 40, 2010
5LVO
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BU of 5lvo by Molmil
Human PDK1 Kinase Domain in Complex with Allosteric Compound PSE10 Bound to the PIF-Pocket
分子名称: 2-oxidanylidenepropyl ~{N}-(2-chloranyl-6-fluoranyl-phenyl)carbonyl-~{N}'-(4-chlorophenyl)carbamimidothioate, 3-phosphoinositide-dependent protein kinase 1, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Schulze, J.O, Saladino, G, Busschots, K, Neimanis, S, Suess, E, Odadzic, D, Zeuzem, S, Hindie, V, Herbrand, A.K, Lisa, M.N, Alzari, P.M, Gervasio, F.L, Biondi, R.M.
登録日2016-09-14
公開日2016-10-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Bidirectional Allosteric Communication between the ATP-Binding Site and the Regulatory PIF Pocket in PDK1 Protein Kinase.
Cell Chem Biol, 23, 2016
3WAJ
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BU of 3waj by Molmil
Crystal structure of the Archaeoglobus fulgidus oligosaccharyltransferase (O29867_ARCFU) complex with Zn and sulfate
分子名称: SULFATE ION, Transmembrane oligosaccharyl transferase, ZINC ION
著者Matsumoto, S, Shimada, A, Kohda, D.
登録日2013-05-03
公開日2013-10-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Crystal structures of an archaeal oligosaccharyltransferase provide insights into the catalytic cycle of N-linked protein glycosylation
Proc.Natl.Acad.Sci.USA, 110, 2013
7VMF
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BU of 7vmf by Molmil
Crystal structure of Arabidopsis thaliana HDT2
分子名称: Histone deacetylase HDT2, SODIUM ION
著者Kumar, A, Bobde, R.C, Vasudevan, D.
登録日2021-10-08
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Plant-specific HDT family histone deacetylases are nucleoplasmins.
Plant Cell, 34, 2022
3OBH
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BU of 3obh by Molmil
X-ray crystal structure of protein SP_0782 (7-79) from Streptococcus pneumoniae. Northeast Structural Genomics Consortium Target SpR104
分子名称: ACETIC ACID, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Kuzin, A, Abashidze, M, Lew, S, Seetharaman, J, Patel, P, Xiao, R, Ciccosanti, C, Lee, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2010-08-06
公開日2010-09-15
最終更新日2012-02-22
実験手法X-RAY DIFFRACTION (1.891 Å)
主引用文献X-ray crystal structure of protein SP_0782 (7-79) from Streptococcus pneumoniae. Northeast Structural Genomics Consortium Target SpR104
To be Published
5M0I
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BU of 5m0i by Molmil
Crystal structure of the nuclear complex with She2p and the ASH1 mRNA E3-localization element
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ASH1-E3 element, ...
著者Edelmann, F.T, Janowski, R, Niessing, D.
登録日2016-10-05
公開日2017-01-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Molecular architecture and dynamics of ASH1 mRNA recognition by its mRNA-transport complex.
Nat. Struct. Mol. Biol., 24, 2017

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