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PDB: 22172 件

3C0B
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Crystal structure of the conserved archaeal protein Q6M145. Northeast Structural Genomics Consortium target MrR63
分子名称: CALCIUM ION, Conserved archaeal protein Q6M145
著者Kuzin, A.P, Su, M, Seetharaman, J, Wang, D, Fang, Y, Cunningham, K, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2008-01-19
公開日2008-02-26
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray structure of the conserved archaeal protein Q6M145.
To be Published
3C8T
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Crystal structure of fumarate lyase from Mesorhizobium sp. BNC1
分子名称: Fumarate lyase
著者Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-02-13
公開日2008-03-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of fumarate lyase from Mesorhizobium sp. BNC1.
To be Published
8J7N
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The cryo-EM structure of Fe3+ induced alpha-syn fibril.
分子名称: Transmembrane protein 106B
著者Zhao, Q.Y, Tao, Y.Q, Yan, F, Liu, C, Li, D.
登録日2023-04-27
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The cryo-EM structure of PBB3 bound TMEM106B fibril.
To Be Published
3C98
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Revised structure of the munc18a-syntaxin1 complex
分子名称: Syntaxin-1A, Syntaxin-binding protein 1
著者Hattendorf, D.A, Misura, K.M, Burkhardt, P, Scheller, R.H, Fasshauer, D, Weis, W.I.
登録日2008-02-15
公開日2008-03-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Munc18a controls SNARE assembly through its interaction with the syntaxin N-peptide
Embo J., 27, 2008
3FTH
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NFLVHSS segment from Islet Amyloid Polypeptide (IAPP or Amylin)
分子名称: NFLVHSS heptapeptide from Islet Amyloid Polypeptide, SULFATE ION
著者Wiltzius, J.J.W, Sawaya, M.R, Eisenberg, D.
登録日2009-01-13
公開日2009-06-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Molecular mechanisms for protein-encoded inheritance
Nat.Struct.Mol.Biol., 16, 2009
8JBE
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CryoEM Structure of metazoan Mon1-Ccz1-RMC1 complex
分子名称: Caffeine, calcium, zinc sensitivity 1, ...
著者Jia, G.W, Yong, X, Su, Z.M, Jia, D.
登録日2023-05-08
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献CryoEM Structure of metazoan Mon1-Ccz1-RMC1 complex
To Be Published
2VRN
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The structure of the stress response protein DR1199 from Deinococcus radiodurans: a member of the DJ-1 superfamily
分子名称: MAGNESIUM ION, PROTEASE I
著者Fioravanti, E, Dura, M.A, Lascoux, D, Micossi, E, McSweeney, S.
登録日2008-04-09
公開日2008-10-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure of the stress response protein DR1199 from Deinococcus radiodurans: a member of the DJ-1 superfamily.
Biochemistry, 47, 2008
3C8H
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Crystal structure of the enterobactin esterase FES from Shigella flexneri in the presence of 2,3-Di-hydroxy-N-benzoyl-serine
分子名称: Enterochelin esterase
著者Kim, Y, Maltseva, N, Abergel, R, Holzle, D, Raymond, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-02-12
公開日2008-02-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Siderophore Mediated Iron Acquisition: Structure and Specificity of Enterobactin Esterase from Shigella flexneri.
To be Published
4RW3
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Structural insights into substrate binding of brown spider venom class II phospholipases D
分子名称: D-MYO-INOSITOL-1-PHOSPHATE, DECANOIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Coronado, M.A, Ullah, A, da Silva, L.S, Chaves-Moreira, D, Vuitika, L, Chaim, O.M, Veiga, S.S, Chahine, J, Murakami, M.T, Arni, R.K.
登録日2014-12-01
公開日2015-06-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Insights into Substrate Binding of Brown Spider Venom Class II Phospholipases D.
Curr Protein Pept Sci, 16, 2015
3CAE
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Structure of NNQQNY as an insert in T7 endonuclease I
分子名称: Endonuclease I
著者Guo, Z, Eisenberg, D.
登録日2008-02-19
公開日2008-07-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of a fibril-forming sequence, NNQQNY, in the context of a globular fold.
Protein Sci., 17, 2008
8J7P
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The cryo-EM structure of PiB bound TMEM106B fibril.
分子名称: Transmembrane protein 106B
著者Zhao, Q.Y, Tao, Y.Q, Yan, F, Liu, C, Li, D.
登録日2023-04-27
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The cryo-EM structure of PiB bound TMEM106B fibril.
To Be Published
8JSX
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VMAT2 complex with noradrenaline in lumen-facing state
分子名称: Noradrenaline, Synaptic vesicular amine transporter
著者Jiang, D.H, Wu, D.
登録日2023-06-20
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献VMAT2 complex with noradrenaline in lumen-facing state
To Be Published
2VWX
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ephB4 kinase domain inhibitor complex
分子名称: 3-({4-[(5-chloro-1,3-benzodioxol-4-yl)amino]pyrimidin-2-yl}amino)benzenesulfonamide, EPHRIN TYPE-B RECEPTOR 4, MAGNESIUM ION
著者Read, J, Brassington, C.A, Green, I, McCall, E.J, Valentine, A.L, Barratt, D, Leach, A.G, Kettle, J.G.
登録日2008-06-27
公開日2008-10-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Inhibitors of the Tyrosine Kinase Ephb4. Part 2: Structure-Based Discovery and Optimisation of 3,5-Bis Substituted Anilinopyrimidines.
Bioorg.Med.Chem.Lett., 18, 2008
8JT5
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VMAT2 complex with histamine
分子名称: HISTAMINE, Synaptic vesicular amine transporter
著者Jiang, D.H, Wu, D.
登録日2023-06-21
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献VMAT2 complex with histamine
To Be Published
8J8G
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Monkeypox virus DNA replication holoenzyme F8, A22 and E4 in complex with a DNA duplex and cidofovir diphosphate
分子名称: CALCIUM ION, DNA (5'-D(P*AP*GP*CP*TP*GP*CP*TP*AP*TP*GP*AP*GP*AP*TP*TP*AP*AP*GP*TP*TP*AP*T)-3'), DNA (5'-D(P*GP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*CP*TP*TP*AP*AP*TP*CP*TP*CP*AP*CP*AP*TP*AP*GP*CP*AP*GP*CP*T)-3'), ...
著者Xu, Y, Wu, Y, Wu, X, Zhang, Y, Yang, Y, Li, D, Yang, B, Gao, K, Zhang, Z, Dong, C.
登録日2023-05-01
公開日2024-05-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Structural basis of human mpox viral DNA replication inhibition by brincidofovir and cidofovir.
Int.J.Biol.Macromol., 270, 2024
2VWZ
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ephB4 kinase domain inhibitor complex
分子名称: EPHRIN TYPE-B RECEPTOR 4, MAGNESIUM ION, N-[3-[[4-[(5-CHLORO-1,3-BENZODIOXOL-4-YL)AMINO]PYRIMIDIN-2-YL]AMINO]PHENYL]METHANESULFONAMIDE
著者Read, J, Brassington, C.A, Green, I, McCall, E.J, Valentine, A.L, Barratt, D, Leach, A.G, Kettle, J.G.
登録日2008-06-30
公開日2008-10-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Inhibitors of the Tyrosine Kinase Ephb4. Part 2: Structure-Based Discovery and Optimisation of 3,5-Bis Substituted Anilinopyrimidines.
Bioorg.Med.Chem.Lett., 18, 2008
2VX1
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BU of 2vx1 by Molmil
ephB4 kinase domain inhibitor complex
分子名称: 3-({4-[(5-CHLORO-1,3-BENZODIOXOL-4-YL)AMINO]PYRIMIDIN-2-YL}AMINO)BENZAMIDE, EPHRIN TYPE-B RECEPTOR 4, MAGNESIUM ION
著者Read, J, Brassington, C.A, Green, I, McCall, E.J, Valentine, A.L, Barratt, D, Leach, A.G, Kettle, J.G.
登録日2008-06-30
公開日2008-10-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Inhibitors of the Tyrosine Kinase Ephb4. Part 2: Structure-Based Discovery and Optimisation of 3,5-Bis Substituted Anilinopyrimidines.
Bioorg.Med.Chem.Lett., 18, 2008
8J8F
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Monkeypox virus DNA replication holoenzyme F8, A22 and E4 in complex with a DNA duplex and dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(P*AP*GP*CP*TP*GP*CP*TP*AP*TP*GP*AP*GP*AP*TP*TP*AP*AP*GP*TP*TP*AP*T)-3'), ...
著者Xu, Y, Wu, Y, Wu, X, Zhang, Y, Yang, Y, Li, D, Yang, B, Gao, K, Zhang, Z, Dong, C.
登録日2023-05-01
公開日2024-05-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Structural basis of human mpox viral DNA replication inhibition by brincidofovir and cidofovir.
Int.J.Biol.Macromol., 270, 2024
2VWS
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Crystal structure of YfaU, a metal ion dependent class II aldolase from Escherichia coli K12
分子名称: GLYCEROL, PHOSPHATE ION, YFAU, ...
著者Rea, D, Rakus, J.F, Gerlt, J.A, Fulop, V, Bugg, T.D.H, Roper, D.I.
登録日2008-06-26
公開日2008-09-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Crystal Structure and Functional Assignment of Yfau, a Metal Ion Dependent Class II Aldolase from Escherichia Coli K12.
Biochemistry, 47, 2008
2ZM2
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Structure of 6-aminohexanoate-dimer hydrolase, A61V/A124V/R187S/F264C/G291R/G338A/D370Y mutant (Hyb-S4M94)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-aminohexanoate-dimer hydrolase, GLYCEROL, ...
著者Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Nego, S.
登録日2008-04-10
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Two alternative modes for optimizing nylon-6 byproduct hydrolytic activity from a carboxylesterase with a beta-lactamase fold: X-ray crystallographic analysis of directly evolved 6-aminohexanoate-dimer hydrolase.
Protein Sci., 18, 2009
2ZVO
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NEMO CoZi domain in complex with diubiquitin in C2 space group
分子名称: NF-kappa-B essential modulator, UBC protein
著者Rahighi, S, Ikeda, F, Kawasaki, M, Akutsu, M, Suzuki, N, Kato, R, Kensche, T, Uejima, T, Bloor, S, Komander, D, Randow, F, Wakatsuki, S, Dikic, I.
登録日2008-11-12
公開日2009-03-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation
Cell(Cambridge,Mass.), 136, 2009
4TQF
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Crystal Structure of the C-terminal domain of IFRS bound with 2-(5-bromothienyl)-L-Ala and ATP
分子名称: 1,2-ETHANEDIOL, 3-(5-bromothiophen-2-yl)-L-alanine, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Nakamura, A, O'Donoghue, P, Soll, D.
登録日2014-06-11
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.7143 Å)
主引用文献Polyspecific pyrrolysyl-tRNA synthetases from directed evolution.
Proc.Natl.Acad.Sci.USA, 111, 2014
8JQU
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Crystal structure of GppNHp bound GTPase domain of Rab5a from Leishmania donovani
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Pandey, D, Zohib, M, Pal, R.K, Biswal, B.K, Arora, A.
登録日2023-06-14
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Crystal structure of GppNHp bound GTPase domain of Rab5a from Leishmania donovani
To Be Published
2ZM0
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Structure of 6-aminohexanoate-dimer hydrolase, G181D/H266N/D370Y mutant
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-aminohexanoate-dimer hydrolase, GLYCEROL, ...
著者Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Nego, S.
登録日2008-04-10
公開日2009-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Molecular design of a nylon-6 byproduct-degrading enzyme from a carboxylesterase with a beta-lactamase fold.
Febs J., 276, 2009
3BKJ
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Crystal structure of Fab wo2 bound to the n terminal domain of amyloid beta peptide (1-16)
分子名称: Amyloid Beta Peptide, WO2 IgG2a Fab fragment Heavy Chain, WO2 IgG2a Fab fragment Light Chain Kappa
著者Miles, L.A, Wun, K.S, Crespi, G.A, Fodero-Tavoletti, M, Galatis, D, Bageley, C.J, Beyreuther, K, Masters, C.L, Cappai, R, McKinstry, W.J, Barnham, K.J, Parker, M.W.
登録日2007-12-06
公開日2008-04-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Amyloid-beta-anti-amyloid-beta complex structure reveals an extended conformation in the immunodominant B-cell epitope.
J.Mol.Biol., 377, 2008

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