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PDB: 22172 件

6TGC
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CryoEM structure of the ternary DOCK2-ELMO1-RAC1 complex.
分子名称: Dedicator of cytokinesis protein 2, Engulfment and cell motility protein 1, Ras-related C3 botulinum toxin substrate 1
著者Chang, L, Yang, J, Chang, J.H, Zhang, Z, Boland, A, McLaughlin, S.H, Abu-Thuraia, A, Killoran, R.C, Smith, M.J, Cote, J.F, Barford, D.
登録日2019-11-15
公開日2020-07-29
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure of the DOCK2-ELMO1 complex provides insights into regulation of the auto-inhibited state.
Nat Commun, 11, 2020
4Y9X
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Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+, uridine-diphosphate-glucose (UDP-Glc) and phosphoglyceric acid (PGA) - GpgS Mn2+ UDP-Glc PGA-3
分子名称: 1,2-ETHANEDIOL, 3-PHOSPHOGLYCERIC ACID, CHLORIDE ION, ...
著者Albesa-Jove, D, Rodrigo-Unzueta, A, Cifuente, J.O, Urresti, S, Comino, N, Sancho-Vaello, E, Guerin, M.E.
登録日2015-02-17
公開日2015-07-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.637 Å)
主引用文献A Native Ternary Complex Trapped in a Crystal Reveals the Catalytic Mechanism of a Retaining Glycosyltransferase.
Angew.Chem.Int.Ed.Engl., 54, 2015
3BDX
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BU of 3bdx by Molmil
Crystal structure of the unstable and highly fibrillogenic Pro7Ser mutant of the Recombinant variable domain 6AJL2
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, Amyloid lambda 6 light chain variable region PIP (fragment), ...
著者Hernandez-Santoyo, A, Fuentes-Silva, D, Del Pozo Yauner, L, Becerril, B, Rodriguez-Romero, A.
登録日2007-11-15
公開日2008-10-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A single mutation at the sheet switch region results in conformational changes favoring lambda6 light-chain fibrillogenesis.
J.Mol.Biol., 396, 2010
4YR1
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BU of 4yr1 by Molmil
Crystal Structure of E. Coli Alkaline Phosphatase D101A/D153A in complex with inorganic phosphate
分子名称: Alkaline phosphatase, GLYCEROL, PHOSPHATE ION, ...
著者Peck, A, Herschlag, D.
登録日2015-03-13
公開日2015-04-29
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Extensive site-directed mutagenesis reveals interconnected functional units in the Alkaline Phosphatase active site.
Elife, 4, 2015
3BE8
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BU of 3be8 by Molmil
Crystal structure of the synaptic protein neuroligin 4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, CITRATE ANION, ...
著者Fabrichny, I.P, Leone, P, Sulzenbacher, G, Comoletti, D, Miller, M.T, Taylor, P, Bourne, Y, Marchot, P.
登録日2007-11-16
公開日2008-01-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Analysis of the Synaptic Protein Neuroligin and Its beta-Neurexin Complex: Determinants for Folding and Cell Adhesion
Neuron, 56, 2007
4YT9
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Crystal structure of Porphyromonas gingivalis peptidylarginine deiminase (PPAD) substrate-unbound.
分子名称: GLYCEROL, Peptidylarginine deiminase, SODIUM ION
著者Goulas, T, Mizgalska, D, Garcia-Ferrer, I, Kantyka, T, Guevara, T, Szmigielski, B, Sroka, A, Millan, C, Uson, I, Veillard, F, Potempa, B, Mydel, P, Sola, M, Potempa, J, Gomis-Ruth, F.X.
登録日2015-03-17
公開日2015-07-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and mechanism of a bacterial host-protein citrullinating virulence factor, Porphyromonas gingivalis peptidylarginine deiminase.
Sci Rep, 5, 2015
3NF7
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Structural basis for a new mechanism of inhibition of HIV integrase identified by fragment screening and structure based design
分子名称: 1,2-ETHANEDIOL, 5-[(5-chloro-2-oxo-2,3-dihydro-1H-indol-1-yl)methyl]-1,3-benzodioxole-4-carboxylic acid, ACETIC ACID, ...
著者Peat, T.S, Newman, J, Deadman, J.J, Rhodes, D.
登録日2010-06-09
公開日2011-04-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for a new mechanism of inhibition of HIV-1 integrase identified by fragment screening and structure-based design
ANTIVIR.CHEM.CHEMOTHER., 21, 2011
3FTL
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NVGSNTY segment from Islet Amyloid Polypeptide (IAPP or Amylin), dehydrated crystal form
分子名称: NVGSNTY heptapeptide segment from Islet Amyloid Polypeptide
著者Wiltzius, J.J.W, Sawaya, M.R, Eisenberg, D.
登録日2009-01-13
公開日2009-06-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular mechanisms for protein-encoded inheritance
Nat.Struct.Mol.Biol., 16, 2009
3BHI
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BU of 3bhi by Molmil
Crystal structure of human Carbonyl Reductase 1 in complex with NADP
分子名称: CHLORIDE ION, Carbonyl reductase [NADPH] 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Rauh, D, Bateman, R.L, Shokat, K.M.
登録日2007-11-28
公開日2008-10-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Human carbonyl reductase 1 is an s-nitrosoglutathione reductase
J.Biol.Chem., 283, 2008
6Q06
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MERS-CoV S structure in complex with 2,3-sialyl-N-acetyl-lactosamine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FOLIC ACID, ...
著者Park, Y.J, Walls, A.C, Wang, Z, Sauer, M, Li, W, Tortorici, M.A, Bosch, B.J, DiMaio, F.D, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2019-08-01
公開日2019-12-11
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structures of MERS-CoV spike glycoprotein in complex with sialoside attachment receptors.
Nat.Struct.Mol.Biol., 26, 2019
3BJS
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BU of 3bjs by Molmil
Crystal structure of a member of enolase superfamily from Polaromonas sp. JS666
分子名称: MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme
著者Patskovsky, Y, Bonanno, J.B, Ozyurt, S, Dickey, M, Sauder, J.M, Reyes, C, Groshong, C, Gheyi, T, Smith, D, Wasserman, S.R, Gerlt, J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-12-04
公開日2007-12-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of a Member of Enolase Superfamily from Polaromonas sp. JS666.
To be Published
6Q34
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BU of 6q34 by Molmil
Dye type peroxidase Aa from Streptomyces lividans: 196 kGy structure
分子名称: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L.
登録日2018-12-03
公開日2019-07-31
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.
Iucrj, 6, 2019
3B0Q
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BU of 3b0q by Molmil
Human PPAR gamma ligand binding domain in complex with MCC555
分子名称: (5S)-5-({6-[(2-fluorobenzyl)oxy]naphthalen-2-yl}methyl)-1,3-thiazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma
著者Tomioka, D, Hashimoto, H, Sato, M, Shimizu, T.
登録日2011-06-13
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of human PPAR gamma in complex with MCC555
To be Published
3FXQ
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BU of 3fxq by Molmil
Crystal structure of the LysR-type transcriptional regulator TsaR
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, FORMIC ACID, ...
著者Monferrer, D, Tralau, T, Kertesz, M.A, Kikhney, A, Svergun, D, Uson, I.
登録日2009-01-21
公開日2010-01-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural studies on the full-length LysR-type regulator TsaR from Comamonas testosteroni T-2 reveal a novel open conformation of the tetrameric LTTR fold
Mol.Microbiol., 75, 2010
6Q31
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Dye type peroxidase Aa from Streptomyces lividans: 156.8 kGy structure
分子名称: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L.
登録日2018-12-03
公開日2019-07-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.
Iucrj, 6, 2019
8IY7
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BU of 8iy7 by Molmil
Cryo-EM structure of DIP-2I8I fibril polymorph1
分子名称: GLY-PHI-GLY-ASN-GLY-ASN-GLY-PHI-GLY
著者Li, D.N, Ma, Y.Y, Li, D, Dai, B, Liu, C.
登録日2023-04-04
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (3.71 Å)
主引用文献Cryo-EM structure of DIP-2I8I fibril polymorph1
To Be Published
3FXR
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Crystal structure of TsaR in complex with sulfate
分子名称: ASCORBIC ACID, GLYCEROL, LysR type regulator of tsaMBCD, ...
著者Monferrer, D, Tralau, T, Kertesz, M.A, Kikhney, A, Svergun, D, Uson, I.
登録日2009-01-21
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural studies on the full-length LysR-type regulator TsaR from Comamonas testosteroni T-2 reveal a novel open conformation of the tetrameric LTTR fold
Mol.Microbiol., 75, 2010
4Y9N
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BU of 4y9n by Molmil
PA3825-EAL Metal-Free-Apo Structure - Magnesium Co-crystallisation
分子名称: PA3825-EAL, PHOSPHATE ION
著者Bellini, D, Horrell, S, Wagner, A, Strange, R, Walsh, M.A.
登録日2015-02-17
公開日2016-03-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structure of PA3825 from P. aeruginosa bound to cyclic di-GMP and pGpG: new insights for a potential three-metal catalytic mechanism of EAL domains
To Be Published
4YEP
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BU of 4yep by Molmil
L4b Domain of Human Laminin alpha-2
分子名称: 1,2-ETHANEDIOL, Laminin subunit alpha-2
著者Toot, M, Gat, Y, Fass, D.
登録日2015-02-24
公開日2015-05-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Laminin L4 domain structure resembles adhesion modules in ephrin receptor and other transmembrane glycoproteins.
Febs J., 282, 2015
8IZZ
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BU of 8izz by Molmil
Cryo-EM structure of DIP-2I8I polymorph 2
分子名称: GLY-PHI-GLY-ASN-GLY-ASN-GLY-PHI-GLY
著者Li, D.N, Ma, Y.Y, Li, D, Dai, B, Liu, C.
登録日2023-04-09
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Cryo-EM structure of DIP-2I8I fibril polymorph 2
To Be Published
3B3V
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BU of 3b3v by Molmil
Crystal structure of the S228A mutant of the aminopeptidase from Vibrio proteolyticus
分子名称: Bacterial leucyl aminopeptidase, SODIUM ION, THIOCYANATE ION, ...
著者Ataie, N.J, Hoang, Q.Q, Zahniser, M.P.D, Milne, A, Petsko, G.A, Ringe, D.
登録日2007-10-22
公開日2007-11-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Zinc coordination geometry and ligand binding affinity: the structural and kinetic analysis of the second-shell serine 228 residue and the methionine 180 residue of the aminopeptidase from Vibrio proteolyticus.
Biochemistry, 47, 2008
3B4M
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BU of 3b4m by Molmil
Crystal Structure of Human PABPN1 RRM
分子名称: Polyadenylate-binding protein 2
著者Ge, H, Zhou, D, Teng, M, Niu, L.
登録日2007-10-24
公開日2008-01-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Crystal structure and possible dimerization of the single RRM of human PABPN1
Proteins, 71, 2008
3B5M
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Crystal structure of conserved uncharacterized protein from Rhodopirellula baltica
分子名称: SULFATE ION, Uncharacterized protein
著者Patskovsky, Y, Bonanno, J.B, Sridhar, V, Rutter, M, Powell, A, Maletic, M, Rodgers, R, Wasserman, S, Smith, D, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-10-26
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Crystal Structure of Conserved Uncharacterized Protein from Rhodopirellula baltica.
To be Published
4YH3
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BU of 4yh3 by Molmil
Crystal structure of human BRD4(1) in complex with 4-[(2E)-3-(4-methoxyphenyl)-2-phenylprop-2-enoyl]-3,4-dihydroquinoxalin-2(1H)-one (compound 19a)
分子名称: 4-[(2E)-3-(4-methoxyphenyl)-2-phenylprop-2-enoyl]-3,4-dihydroquinoxalin-2(1H)-one, Bromodomain-containing protein 4
著者White, A, Lakshminarasimhan, D, Suto, R.K.
登録日2015-02-26
公開日2016-01-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of a new chemical series of BRD4(1) inhibitors using protein-ligand docking and structure-guided design.
Bioorg.Med.Chem.Lett., 25, 2015
4YEW
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BU of 4yew by Molmil
HUab-19bp
分子名称: DNA-binding protein HU-alpha, DNA-binding protein HU-beta, synthetic DNA strand
著者Hammel, M, Reyes, F.E, Parpana, R, Tainer, J.A, Adhya, S, Amlanjyoti, D.
登録日2015-02-24
公開日2016-06-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.683 Å)
主引用文献HU multimerization shift controls nucleoid compaction.
Sci Adv, 2, 2016

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件を2024-07-10に公開中

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