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PDB: 155 results

1HL4
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The Structure of Apo Type Human Cu, Zn Superoxide Dismutase
Descriptor: SUPEROXIDE DISMUTASE, ZINC ION
Authors:Strange, R.W, Antonyuk, S, Hough, M.A, Doucette, P, Rodriguez, J, Hart, P.J, Hayward, L.J, Valentine, J.S, Hasnain, S.S.
Deposit date:2003-03-13
Release date:2003-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:The Structure of Holo and Metal-Deficient Wild-Type Human Cu, Zn Superoxide Dismutase and its Relevance to Familial Amyotrophic Lateral Sclerosis
J.Mol.Biol., 328, 2003
1HL5
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The Structure of Holo Type Human Cu, Zn Superoxide Dismutase
Descriptor: CALCIUM ION, COPPER (II) ION, SUPEROXIDE DISMUTASE, ...
Authors:Strange, R.W, Antonyuk, S, Hough, M.A, Doucette, P, Rodriguez, J, Hart, P.J, Hayward, L.J, Valentine, J.S, Hasnain, S.S.
Deposit date:2003-03-13
Release date:2003-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Structure of Holo and Metal-Deficient Wild-Type Human Cu, Zn Superoxide Dismutase and its Relevance to Familial Amyotrophic Lateral Sclerosis
J.Mol.Biol., 328, 2003
1OEZ
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Zn His46Arg mutant of Human Cu, Zn Superoxide Dismutase
Descriptor: SULFATE ION, SUPEROXIDE DISMUTASE [CU-ZN], ZINC ION
Authors:Strange, R.W, Antonyuk, S, Hough, M.A, Doucette, P, Rodriguez, J, Elam, J.S, Hart, P.J, Hayward, L.J, Valentine, J.S, Hasnain, S.S.
Deposit date:2003-04-02
Release date:2003-05-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Amyloid-Like Filaments and Water-Filled Nanotubes Formed by Sod1 Mutant Proteins Linked to Familial Als
Nat.Struct.Biol., 10, 2003
5NGX
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The 1.06 A resolution structure of the L16G mutant of ferric cytochrome c prime from Alcaligenes xylosoxidans, complexed with nitrite
Descriptor: Cytochrome c', GLYCEROL, HEME C, ...
Authors:Strange, R, Hough, M, Kekelli, D, Horrell, S, Moreno Chicano, T.
Deposit date:2017-03-20
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Distinguishing Nitro vs Nitrito Coordination in Cytochrome c' Using Vibrational Spectroscopy and Density Functional Theory.
Inorg.Chem., 56, 2017
5NC0
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The 0.91 A resolution structure of the L16G mutant of cytochrome c prime from Alcaligenes xylosoxidans, complexed with nitric oxide
Descriptor: 1,2-ETHANEDIOL, Cytochrome c', HEME C, ...
Authors:Strange, R, Hough, M, Antonyuk, S, Rustage, N.
Deposit date:2017-03-02
Release date:2018-01-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:Distinguishing Nitro vs Nitrito Coordination in Cytochrome c' Using Vibrational Spectroscopy and Density Functional Theory.
Inorg Chem, 56, 2017
3KBB
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Crystal structure of putative beta-phosphoglucomutase from Thermotoga maritima
Descriptor: GLYCEROL, Phosphorylated carbohydrates phosphatase TM_1254, SULFATE ION
Authors:Strange, R.W, Antonyuk, S.V, Ellis, M.J, Bessho, Y, Kuramitsu, S, Yokoyama, S, Hasnain, S.S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-10-20
Release date:2009-11-17
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structure of a putative beta-phosphoglucomutase (TM1254) from Thermotoga maritima.
Acta Crystallogr.,Sect.F, 65, 2009
2C9U
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1.24 Angstroms resolution structure of as-isolated Cu-Zn Human Superoxide dismutase
Descriptor: ACETATE ION, COPPER (II) ION, SULFATE ION, ...
Authors:Strange, R.W, Antonyuk, S.V, Hough, M.A, Doucette, P.A, Valentine S, J.S, Hasnain, S.
Deposit date:2005-12-14
Release date:2005-12-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Variable Metallation of Human Superoxide Dismutase: Atomic Resolution Crystal Structures of Cu-Zn, Zn-Zn and as-Isolated Wild-Type Enzymes.
J.Mol.Biol., 356, 2006
2C9V
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Atomic resolution structure of Cu-Zn Human Superoxide dismutase
Descriptor: COPPER (II) ION, SODIUM ION, SULFATE ION, ...
Authors:Strange, R.W, Antonyuk, S.V, Hough, M.A, Doucette, P.A, Valentine, J.S, Hasnain, S.S.
Deposit date:2005-12-14
Release date:2005-12-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Variable Metallation of Human Superoxide Dismutase: Atomic Resolution Crystal Structures of Cu-Zn, Zn-Zn and as-Isolated Wild-Type Enzymes.
J.Mol.Biol., 356, 2006
2C9S
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1.24 Angstroms resolution structure of Zn-Zn Human Superoxide dismutase
Descriptor: ACETATE ION, SULFATE ION, SUPEROXIDE DISMUTASE [CU-ZN], ...
Authors:Strange, R.W, Antonyuk, S.V, Hough, M.A, Doucette, P.A, Valentine S, J.S, Hasnain, S.
Deposit date:2005-12-14
Release date:2005-12-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Variable Metallation of Human Superoxide Dismutase: Atomic Resolution Crystal Structures of Cu-Zn, Zn-Zn and as-Isolated Wild-Type Enzymes.
J.Mol.Biol., 356, 2006
4B3E
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Structure of copper-zinc superoxide dismutase complexed with bicarbonate.
Descriptor: CARBONATE ION, COPPER (II) ION, SULFATE ION, ...
Authors:Strange, R.W, Hough, M.A, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2012-07-23
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Evidence for a Copper-Bound Carbonate Intermediate in the Peroxidase and Dismutase Activities of Superoxide Dismutase.
Plos One, 7, 2012
2V0A
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Atomic resolution crystal structure of Human Superoxide Dismutase
Descriptor: ACETATE ION, COPPER (II) ION, SULFATE ION, ...
Authors:Strange, R.W, Antonyuk, S, Yong, C.W, Smith, W, Hasnain, S.S.
Deposit date:2007-05-11
Release date:2007-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Molecular Dynamics Using Atomic-Resolution Structure Reveal Structural Fluctuations that May Lead to Polymerization of Human Cu-Zn Superoxide Dismutase.
Proc.Natl.Acad.Sci.USA, 104, 2007
3CQQ
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Human SOD1 G85R Variant, Structure II
Descriptor: ACETYL GROUP, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Cao, X, Antonyuk, S, Whitson, L.J, Taylor, A.B, Holloway, S.P, Strange, R.W, Doucette, P.A, Valentine, J.S, Tiwari, A, Hayward, L.J, Padua, S, Cohlberg, J.A, Hasnain, S.S, Hart, P.J.
Deposit date:2008-04-03
Release date:2008-04-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of the G85R Variant of SOD1 in Familial Amyotrophic Lateral Sclerosis.
J.Biol.Chem., 283, 2008
3CQP
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Human SOD1 G85R Variant, Structure I
Descriptor: COPPER (II) ION, MALONATE ION, Superoxide dismutase [Cu-Zn], ...
Authors:Cao, X, Antonyuk, S, Seetharaman, S.V, Whitson, L.J, Taylor, A.B, Holloway, S.P, Strange, R.W, Doucette, P.A, Valentine, J.S, Tiwari, A, Hayward, L.J, Padua, S, Cohlberg, J.A, Hasnain, S.S, Hart, P.J.
Deposit date:2008-04-03
Release date:2008-04-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of the G85R Variant of SOD1 in Familial Amyotrophic Lateral Sclerosis.
J.Biol.Chem., 283, 2008
4Y9M
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PA3825-EAL Metal-Free-Apo Structure
Descriptor: PA3825-EAL, PHOSPHATE ION
Authors:Bellini, D, Horrell, S, Wagner, A, Strange, R, Walsh, M.A.
Deposit date:2015-02-17
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Dimerisation induced formation of the active site and the identification of three metal sites in EAL-phosphodiesterases.
Sci Rep, 7, 2017
4Y9P
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PA3825-EAL Ca-CdG Structure
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, PA3825-EAL
Authors:Bellini, D, Horrell, S, Wagner, A, Strange, R, Walsh, M.A.
Deposit date:2015-02-17
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:MucR and PA3825 EAL-phosphodiesterase domains from Pseudomonas aeruginosa suggest roles for three metals in the active site
To Be Published
2JLP
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BU of 2jlp by Molmil
Crystal structure of human extracellular copper-zinc superoxide dismutase.
Descriptor: COPPER (II) ION, EXTRACELLULAR SUPEROXIDE DISMUTASE (CU-ZN), THIOCYANATE ION, ...
Authors:Antonyuk, S.V, Strange, R.W, Marklund, S.L, Hasnain, S.S.
Deposit date:2008-09-14
Release date:2009-03-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of Human Extracellular Copper-Zinc Superoxide Dismutase at 1.7 A Resolution: Insights Into Heparin and Collagen Binding.
J.Mol.Biol., 388, 2009
2JHO
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BU of 2jho by Molmil
Cyanomet Sperm Whale Myoglobin at 1.4A resolution
Descriptor: CYANIDE ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Arcovito, A, Benfatto, M, Cianci, M, Hasnain, S.S, Nienhaus, K, Nienhaus, G.U, Savino, C, Strange, R.W, Vallone, B, Della Longa, S.
Deposit date:2007-02-23
Release date:2007-04-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:X-ray structure analysis of a metalloprotein with enhanced active-site resolution using in situ x-ray absorption near edge structure spectroscopy.
Proc. Natl. Acad. Sci. U.S.A., 104, 2007
8B61
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Crystal structure of BfrC protein from Bacteroides fragilis NCTC 9343
Descriptor: Conserved hypothetical lipoprotein, GLYCEROL, pentane-1,3,5-tricarboxylic acid
Authors:Antonyuk, S.V, Barnett, K, Strange, R.W, Olczak, T.
Deposit date:2022-09-25
Release date:2023-05-31
Last modified:2023-06-07
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Bacteroides fragilis expresses three proteins similar to Porphyromonas gingivalis HmuY: Hemophore-like proteins differentially evolved to participate in heme acquisition in oral and gut microbiomes.
Faseb J., 37, 2023
8B6A
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BU of 8b6a by Molmil
Crystal structure of BfrB protein from Bacteroides fragilis NCTC 9343
Descriptor: Conserved hypothetical lipoprotein, GLYCEROL, SULFATE ION
Authors:Antonyuk, S.V, Strange, R.W, Olczak, T.
Deposit date:2022-09-26
Release date:2023-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Bacteroides fragilis expresses three proteins similar to Porphyromonas gingivalis HmuY: Hemophore-like proteins differentially evolved to participate in heme acquisition in oral and gut microbiomes.
Faseb J., 37, 2023
4Y8E
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PA3825-EAL Ca-Apo Structure
Descriptor: CALCIUM ION, PA3825 EAL
Authors:Horrell, S, Bellini, D, Strange, R, Wagner, A, Walsh, M.
Deposit date:2015-02-16
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structure of PA3825 from P. aeruginosa bound to cyclic di-GMP and pGpG: new insights for a potential three-metal catalytic mechanism of EAL domains
To Be Published
4Y9O
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PA3825-EAL Metal-Free-Apo Structure - Manganese Co-crystallisation
Descriptor: PA3825-EAL, PHOSPHATE ION
Authors:Bellini, D, Horrell, S, Wagner, A, Strange, R, Walsh, M.A.
Deposit date:2015-02-17
Release date:2016-09-14
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:MucR and PA3825 EAL-phosphodiesterase domains from Pseudomonas aeruginosa suggest roles for three metals in the active site
To Be Published
4Y9N
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BU of 4y9n by Molmil
PA3825-EAL Metal-Free-Apo Structure - Magnesium Co-crystallisation
Descriptor: PA3825-EAL, PHOSPHATE ION
Authors:Bellini, D, Horrell, S, Wagner, A, Strange, R, Walsh, M.A.
Deposit date:2015-02-17
Release date:2016-03-09
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structure of PA3825 from P. aeruginosa bound to cyclic di-GMP and pGpG: new insights for a potential three-metal catalytic mechanism of EAL domains
To Be Published
5AGF
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BU of 5agf by Molmil
Nitrosyl complex of the D121Q variant of cytochrome c prime from Alcaligenes xylosoxidans
Descriptor: CYTOCHROME C PRIME, HEME C, NITRIC OXIDE, ...
Authors:Gahfoor, D.D, Kekilli, D, Abdullah, G.H, Dworkowski, F.S.N, Hassan, H.G, Wilson, M.T, Hough, M.A, Strange, R.W.
Deposit date:2015-01-30
Release date:2015-09-09
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Hydrogen Bonding of the Dissociated Histidine Ligand is not Required for Formation of a Proximal No Adduct in Cytochrome C'.
J.Biol.Inorg.Chem., 20, 2015
6R2H
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BU of 6r2h by Molmil
Crystal structure of Apo PinO from Porphyromonas gingivitis
Descriptor: GLYCEROL, HmuY protein
Authors:Antonyuk, S.V, Bielecki, M, Strange, R.W, Capper, M, Olczak, T, Olczak, M.
Deposit date:2019-03-17
Release date:2020-01-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Prevotella intermedia produces two proteins homologous to Porphyromonas gingivalis HmuY but with different heme coordination mode.
Biochem.J., 477, 2020
1GS7
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BU of 1gs7 by Molmil
Crystal structure of H254F mutant of Alcaligenes xylosoxidans Nitrite Reductase
Descriptor: COPPER (II) ION, DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE, ZINC ION
Authors:Ellis, M.J, Prudencio, M, Dodd, F.E, Strange, R.W, Sawers, G, Eady, R.R, Hasnain, S.S.
Deposit date:2002-01-02
Release date:2002-02-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biochemical and Crystallographic Studies of the met144Ala, Asp92Asn and His254Phe Mutants of the Nitrite Reductase from Alcaligenes Xylosoxidans Provide Insight Into the Enzyme Mechanism.
J.Mol.Biol., 316, 2002

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