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PDB: 22322 results

2YGH
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BU of 2ygh by Molmil
SAM-I riboswitch with a G2nA mutation in the Kink turn in complex with S-adenosylmethionine
Descriptor: POTASSIUM ION, S-ADENOSYLMETHIONINE, SAM-I RIBOSWITCH, ...
Authors:Schroeder, K, Daldrop, P, Lilley, D.
Deposit date:2011-04-17
Release date:2011-09-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:RNA Tertiary Interactions in a Riboswitch Stabilize the Structure of a Kink Turn.
Structure, 19, 2011
5E7N
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BU of 5e7n by Molmil
Crystal Structure of RPA70N in complex with VU0085636
Descriptor: 2-({3-[(4-bromophenyl)sulfamoyl]-4-methylbenzoyl}amino)benzoic acid, Replication protein A 70 kDa DNA-binding subunit
Authors:Gilston, B.A, Patrone, J.D, Pelz, N.F, Bates, B.S, Souza-Fagundes, E.M, Vangamudi, B, Camper, D, Kuznetsov, A, Browning, C.F, Feldkamp, M.D, Olejniczak, E.T, Rossanese, O.W, Waterson, A.G, Fesik, S.W, Chazin, W.J.
Deposit date:2015-10-12
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Identification and Optimization of Anthranilic Acid Based Inhibitors of Replication Protein A.
Chemmedchem, 11, 2016
5DNR
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BU of 5dnr by Molmil
Aurora A Kinase in complex with ATP in space group P41212
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Aurora kinase A, MAGNESIUM ION, ...
Authors:Janecek, M, Rossmann, M, Sharma, P, Emery, A, McKenzie, G, Huggins, D, Stockwell, S, Stokes, J.A, Almeida, E.G, Hardwick, B, Narvaez, A.J, Hyvonen, M, Spring, D.R, Venkitaraman, A.
Deposit date:2015-09-10
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Allosteric modulation of AURKA kinase activity by a small-molecule inhibitor of its protein-protein interaction with TPX2.
Sci Rep, 6, 2016
5EBU
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BU of 5ebu by Molmil
Aerococcus viridans L-lactate oxidase Y215F mutant
Descriptor: FLAVIN MONONUCLEOTIDE, L-lactate oxidase, PYRUVIC ACID
Authors:Rainer, D, Nidetzky, B, Wilson, D.K.
Deposit date:2015-10-19
Release date:2016-06-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Conformational flexibility related to enzyme activity: evidence for a dynamic active-site gatekeeper function of Tyr(215) in Aerococcus viridans lactate oxidase.
Sci Rep, 6, 2016
3B0R
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BU of 3b0r by Molmil
Human PPAR gamma ligand binding dmain complexed with GW9662 in a covalent bonded form
Descriptor: 2-chloro-5-nitro-N-phenylbenzamide, Peroxisome proliferator-activated receptor gamma
Authors:Tomioka, D, Hashimoto, H, Sato, M, Shimizu, T.
Deposit date:2011-06-13
Release date:2011-08-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Human PPAR gamma ligand binding dmain complexed with GW9662 in a covalent bonded form
To be published
5G2W
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BU of 5g2w by Molmil
S. enterica HisA mutant D10G, G102A
Descriptor: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, SULFATE ION
Authors:Guo, X, Soderholm, A, Newton, M, Nasvall, J, Andersson, D, Patrick, W, Selmer, M.
Deposit date:2016-04-14
Release date:2017-04-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Structural and functional innovations in the real-time evolution of new ( beta alpha )8 barrel enzymes.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3B7J
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BU of 3b7j by Molmil
Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase(FabZ) from Helicobacter pylori complexed with juglone
Descriptor: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase, 5-hydroxynaphthalene-1,4-dione, BENZAMIDINE, ...
Authors:Zhang, L, Kong, Y.H, Wu, D, Shen, X, Jiang, H.L.
Deposit date:2007-10-31
Release date:2008-09-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Natural product juglone targets three key enzymes from Helicobacter pylori: inhibition assay with crystal structure characterization
ACTA PHARMACOL.SIN., 29, 2008
3B9K
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BU of 3b9k by Molmil
Crystal structure of CD8alpha-beta in complex with YTS 156.7 FAB
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light Chain, ...
Authors:Shore, D, Wilson, I.A.
Deposit date:2007-11-05
Release date:2008-11-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Crystal Structure of CD8 in Complex with YTS156.7.7 Fab and Interaction with Other CD8 Antibodies Define the Binding Mode of CD8 alphabeta to MHC Class I
J.Mol.Biol., 384, 2008
3BYV
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BU of 3byv by Molmil
Crystal structure of Toxoplasma gondii specific rhoptry antigen kinase domain
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Rhoptry kinase
Authors:Wernimont, A.K, Lunin, V.V, Yang, C, Lew, J, Kozieradzki, I, Lin, Y.H, Sun, X, Khuu, C, Zhao, Y, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bochkarev, A, Hui, R, Sibley, D, Qiu, W, Structural Genomics Consortium (SGC)
Deposit date:2008-01-16
Release date:2008-01-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Novel structural and regulatory features of rhoptry secretory kinases in Toxoplasma gondii.
Embo J., 28, 2009
6TZN
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BU of 6tzn by Molmil
Structure of S. pombe telomerase accessory protein Pof8 C-terminal domain
Descriptor: NITRATE ION, Protein pof8
Authors:Basu, R.S, Cascio, D, Eichhorn, C.D, Feigon, J.
Deposit date:2019-08-12
Release date:2020-08-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of S. pombe telomerase protein Pof8 C-terminal domain is an xRRM conserved among LARP7 proteins.
Rna Biol., 18, 2021
8S9D
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BU of 8s9d by Molmil
C143S variant of Citrate Synthase (CitA) in Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, citrate synthase
Authors:Pathirage, R, Ronning, D.
Deposit date:2023-03-27
Release date:2023-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Mycobacterium tuberculosis CitA activity is modulated by cysteine oxidation and pyruvate binding.
Rsc Med Chem, 14, 2023
8S97
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BU of 8s97 by Molmil
C143W variant of Citrate Synthase (CitA) in Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, citrate synthase
Authors:Pathirage, R, Ronning, D.
Deposit date:2023-03-27
Release date:2023-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mycobacterium tuberculosis CitA activity is modulated by cysteine oxidation and pyruvate binding.
Rsc Med Chem, 14, 2023
6UBF
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BU of 6ubf by Molmil
Role of Beta-hairpin motifs in the DNA duplex opening by the Rad4/XPC nucleotide excision repair complex
Descriptor: DNA (5'-D(*AP*TP*TP*GP*TP*AP*GP*CP*GP*GP*GP*AP*TP*GP*TP*CP*GP*AP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*(G47)P*AP*CP*AP*TP*CP*CP*C*GP*CP*TP*AP*CP*AP*A)-3'), DNA repair protein RAD4, ...
Authors:Paul, D, Min, J.H.
Deposit date:2019-09-11
Release date:2020-10-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.597 Å)
Cite:Kinetic gating mechanism of DNA damage recognition by Rad4/XPC.
Nat Commun, 6, 2015
7SLH
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BU of 7slh by Molmil
Engineered sperm whale myoglobin-based carbene transferase MbBTIC-C3
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Jenkins, J.L, Vargas, D, Ren, X, Fasan, R.
Deposit date:2021-10-24
Release date:2023-05-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Biocatalytic strategy for the construction of sp 3 -rich polycyclic compounds from directed evolution and computational modelling.
Nat.Chem., 16, 2024
7SLI
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BU of 7sli by Molmil
Engineered sperm whale myoglobin-based carbene transferase MbBTIC-C2
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Jenkins, J.L, Vargas, D, Ren, X, Fasan, R.
Deposit date:2021-10-24
Release date:2023-05-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biocatalytic strategy for the construction of sp 3 -rich polycyclic compounds from directed evolution and computational modelling.
Nat.Chem., 16, 2024
8SPB
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BU of 8spb by Molmil
Caspase-4/Pro-IL-18 complex
Descriptor: Caspase-4 subunit p10, Caspase-4 subunit p20, Interleukin-18
Authors:Pascal, D, Dong, Y, Wu, H, Jon, K.
Deposit date:2023-05-02
Release date:2023-11-22
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into cytokine cleavage by inflammatory caspase-4.
Nature, 624, 2023
6VAP
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BU of 6vap by Molmil
Structure of the type II thioesterase BorB from the borrelidin biosynthetic cluster
Descriptor: Thioesterase
Authors:Pereira, J.H, Curran, S.C, Baluyot, M.-J, Lake, J, Putz, H, Rosenburg, D, Keasling, J, Adams, P.D.
Deposit date:2019-12-17
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure and Function of BorB, the Type II Thioesterase from the Borrelidin Biosynthetic Gene Cluster.
Biochemistry, 59, 2020
6UW1
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BU of 6uw1 by Molmil
The crystal structure of FbiA from Mycobacterium Smegmatis, Fo bound form
Descriptor: 1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol, CALCIUM ION, Phosphoenolpyruvate transferase
Authors:Grinter, R, Gillett, D, Cordero, P.R.F, Greening, C.
Deposit date:2019-11-04
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.205 Å)
Cite:Cellular and Structural Basis of Synthesis of the Unique Intermediate Dehydro-F420-0 in Mycobacteria.
mSystems, 5, 2020
8SLV
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BU of 8slv by Molmil
Structure of a salivary alpha-glucosidase from the mosquito vector Aedes aegypti.
Descriptor: 1,3-PROPANDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gittis, A.G, Williams, A.E, Garboczi, D, Calvo, E.
Deposit date:2023-04-24
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural and functional comparisons of salivary alpha-glucosidases from the mosquito vectors Aedes aegypti, Anopheles gambiae, and Culex quinquefasciatus.
Insect Biochem.Mol.Biol., 167, 2024
6URQ
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BU of 6urq by Molmil
Complex structure of human poly-ADP-ribosyltransferase TNKS1 ARC2-ARC3 and P antigen family member 4 (PAGE4)
Descriptor: GLYCEROL, P antigen family member 4, Poly [ADP-ribose] polymerase tankyrase-1, ...
Authors:Zheng, Y, Koirala, S, Miller, D, Potts, P.R.
Deposit date:2019-10-24
Release date:2020-07-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Tissue-Specific Regulation of the Wnt/ beta-Catenin Pathway by PAGE4 Inhibition of Tankyrase.
Cell Rep, 32, 2020
8SE7
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BU of 8se7 by Molmil
HTRA-1 PDSA bound to CKP 1A8
Descriptor: Cysteine knot peptide, Serine protease HTRA1
Authors:Ultsch, M.H, Kirchhofer, D, Wei, Y.
Deposit date:2023-04-08
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:HTRA-1 PDSA bound to CKP 1A8
To Be Published
8SDM
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BU of 8sdm by Molmil
HTRA-1 PDSA bound to CKP 3B3
Descriptor: Cysteine-containing peptide 3B3, Serine protease HTRA1
Authors:Ultsch, M.H, Kirchhofer, D, Wei, Y.
Deposit date:2023-04-07
Release date:2024-07-03
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:HTRA-1 PDSA bound to CKP 3B3
To Be Published
8SDP
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BU of 8sdp by Molmil
HTRA-1 PDSA bound to CKP 3A7
Descriptor: Cysteine knot peptide 3A7, SULFATE ION, Serine protease HTRA1
Authors:Ultsch, M.H, Kirchhofer, D, Wei, Y.
Deposit date:2023-04-07
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:HTRA-1 PDSA bound to CKP 3A7
To Be Published
6UW7
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BU of 6uw7 by Molmil
The crystal structure of FbiA from Mycobacterium smegmatis, Dehydro-F420-0 bound form
Descriptor: 2-[oxidanyl-[(2~{R},3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-[2,4,8-tris(oxidanylidene)-1,9-dihydropyrimido[4,5-b]quinolin-10-yl]pentoxy]phosphoryl]oxyprop-2-enoic acid, CALCIUM ION, GLYCEROL, ...
Authors:Grinter, R, Gillett, D, Cordero, P.R.F, Izore, T, Greening, C.
Deposit date:2019-11-04
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.342 Å)
Cite:Cellular and Structural Basis of Synthesis of the Unique Intermediate Dehydro-F420-0 in Mycobacteria.
mSystems, 5, 2020
1YQZ
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BU of 1yqz by Molmil
Structure of Coenzyme A-Disulfide Reductase from Staphylococcus aureus refined at 1.54 Angstrom resolution
Descriptor: CHLORIDE ION, COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Mallett, T.C, Wallen, J.R, Sakai, H, Luba, J, Parsonage, D, Karplus, P.A, Tsukihara, T, Claiborne, A.
Deposit date:2005-02-02
Release date:2006-05-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure of coenzyme A-disulfide reductase from Staphylococcus aureus at 1.54 A resolution.
Biochemistry, 45, 2006

224004

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