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PDB: 22600 results

1Z1G
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Crystal structure of a lambda integrase tetramer bound to a Holliday junction
Descriptor: 25-MER, 29-MER, 5'-D(*AP*CP*AP*GP*GP*TP*CP*AP*CP*TP*AP*TP*CP*AP*GP*TP*CP*AP*AP*AP*AP*TP*AP*CP*C)-3', ...
Authors:Biswas, T, Aihara, H, Radman-Livaja, M, Filman, D, Landy, A, Ellenberger, T.
Deposit date:2005-03-03
Release date:2005-06-28
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (4.4 Å)
Cite:A structural basis for allosteric control of DNA recombination by lambda integrase.
Nature, 435, 2005
2KIZ
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Solution structure of Arkadia RING-H2 finger domain
Descriptor: E3 ubiquitin-protein ligase Arkadia, ZINC ION
Authors:Kandias, N.G, Chasapis, C.T, Bentrop, D, Episkopou, V, Spyroulias, G.A.
Deposit date:2009-05-13
Release date:2010-05-19
Last modified:2013-03-20
Method:SOLUTION NMR
Cite:NMR-based insights into the conformational and interaction properties of Arkadia RING-H2 E3 Ub ligase.
Proteins, 80, 2012
1Z1L
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The Crystal Structure of the Phosphodiesterase 2A Catalytic Domain
Descriptor: MAGNESIUM ION, PHOSPHATE ION, ZINC ION, ...
Authors:Ding, Y.H, Kohls, D, Low, C.
Deposit date:2005-03-04
Release date:2005-06-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Determinants for Inhibitor Specificity and Selectivity in PDE2A Using the Wheat Germ in Vitro Translation System.
Biochemistry, 44, 2005
1Z9B
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Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2
Descriptor: Translation initiation factor IF-2
Authors:Wienk, H, Tomaselli, S, Bernard, C, Spurio, R, Picone, D, Gualerzi, C.O, Boelens, R.
Deposit date:2005-04-01
Release date:2005-08-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2
Protein Sci., 14, 2005
1ZAE
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Solution structure of the functional domain of phi29 replication organizer p16.7c
Descriptor: Early protein GP16.7
Authors:Asensio, J.L, Albert, A, Munoz-Espin, D, Gonzalez, C, Hermoso, J, Villar, L, Jimenez-Barbero, J, Salas, M, Meijer, W.J.J.
Deposit date:2005-04-06
Release date:2005-04-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the functional domain of phi29 replication organizer: insights into oligomerization and dna binding
J.Biol.Chem., 280, 2005
1ZF9
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GGG Duplex A-DNA
Descriptor: 5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3', SODIUM ION
Authors:Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
Deposit date:2005-04-20
Release date:2005-05-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2AJJ
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BU of 2ajj by Molmil
NMR structure of the in-plane membrane anchor domain [1-28] of the monotopic Non Structural Protein 5A (NS5A) of Bovine Viral Diarrhea Virus (BVDV)
Descriptor: Nonstructural protein 5A
Authors:Sapay, N, Montserret, R, Chipot, C, Brass, V, Moradpour, D, Deleage, G, Penin, F.
Deposit date:2005-08-02
Release date:2005-08-23
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:NMR structure and molecular dynamics of the in-plane membrane anchor of nonstructural protein 5A from bovine viral diarrhea virus.
Biochemistry, 45, 2006
2BD1
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A possible role of the second calcium ion in interfacial binding: Atomic and medium resolution crystal structures of the quadruple mutant of phospholipase A2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Phospholipase A2
Authors:Sekar, K, Velmurugan, D, Tsai, M.D.
Deposit date:2005-10-19
Release date:2006-07-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A(2).
Acta Crystallogr.,Sect.D, 62, 2006
2BDJ
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Src kinase in complex with inhibitor AP23464
Descriptor: 3-[2-(2-CYCLOPENTYL-6-{[4-(DIMETHYLPHOSPHORYL)PHENYL]AMINO}-9H-PURIN-9-YL)ETHYL]PHENOL, Proto-oncogene tyrosine-protein kinase Src
Authors:Dalgarno, D, Stehle, T, Schelling, P, Narula, S, Sawyer, T.
Deposit date:2005-10-20
Release date:2006-10-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of Src tyrosine kinase inhibition with a new class of potent and selective trisubstituted purine-based compounds.
Chem.Biol.Drug Des., 67, 2006
2BTI
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Structure-function studies of the RmsA CsrA post-transcriptional global regulator protein family reveals a class of RNA-binding structure
Descriptor: ACETATE ION, CARBON STORAGE REGULATOR HOMOLOG, SULFATE ION
Authors:Heeb, S, Kuehne, S.A, Bycroft, M, Crivii, S, Allen, M.D, Haas, D, Camara, M, Williams, P.
Deposit date:2005-05-31
Release date:2006-01-04
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional Analysis of the Post-Transcriptional Regulator Rsma Reveals a Novel RNA-Binding Site.
J.Mol.Biol., 355, 2006
2BJI
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High Resolution Structure of myo-Inositol Monophosphatase, The Target of Lithium Therapy
Descriptor: INOSITOL-1(OR 4)-MONOPHOSPHATASE, MAGNESIUM ION
Authors:Gill, R, Mohammed, F, Badyal, R, Coates, L, Erskine, P, Thompson, D, Cooper, J, Gore, M, Wood, S.
Deposit date:2005-02-03
Release date:2005-02-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:High-resolution structure of myo-inositol monophosphatase, the putative target of lithium therapy.
Acta Crystallogr. D Biol. Crystallogr., 61, 2005
2BJN
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X-ray Structure of human TPC6
Descriptor: GLYCEROL, SULFATE ION, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B
Authors:Kummel, D, Mueller, J.J, Roske, Y, Misselwitz, R, Bussow, K, Heinemann, U.
Deposit date:2005-02-04
Release date:2005-07-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of the Trapp Subunit Tpc6 Suggests a Model for a Trapp Subcomplex.
Embo Rep., 6, 2005
2BKW
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BU of 2bkw by Molmil
Yeast alanine:glyoxylate aminotransferase YFL030w
Descriptor: ALANINE-GLYOXYLATE AMINOTRANSFERASE 1, GLYOXYLIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Meyer, P, Liger, D, Leulliot, N, Quevillon-Cheruel, S, Zhou, C.Z, Borel, F, Ferrer, J.L, Poupon, A, Janin, J, van Tilbeurgh, H.
Deposit date:2005-02-21
Release date:2005-11-02
Last modified:2015-11-18
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Crystal Structure and Confirmation of the Alanine:Glyoxylate Aminotransferase Activity of the Yfl030W Yeast Protein
Biochimie, 87, 2005
2A1T
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Structure of the human MCAD:ETF E165betaA complex
Descriptor: ADENOSINE MONOPHOSPHATE, Acyl-CoA dehydrogenase, medium-chain specific, ...
Authors:Toogood, H.S, Van Thiel, A, Scrutton, N.S, Leys, D.
Deposit date:2005-06-21
Release date:2005-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Stabilization of Non-productive Conformations Underpins Rapid Electron Transfer to Electron-transferring Flavoprotein
J.Biol.Chem., 280, 2005
2A2X
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Orally Active Thrombin Inhibitors in Complex with Thrombin Inh12
Descriptor: N-(CARBOXYMETHYL)-3-CYCLOHEXYL-D-ALANYL-N-({6-[AMINO(IMINO)METHYL]PYRIDIN-3-YL}METHYL)-N~2~-METHYL-L-ALANINAMIDE, Thrombin heavy chain, Thrombin light chain, ...
Authors:Lange, U.E.W, Baucke, D, Hornberger, W, Mack, H, Seitz, W, Hoeffken, H.W.
Deposit date:2005-06-23
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Orally active thrombin inhibitors. Part 2: optimization of the P2-moiety
BIOORG.MED.CHEM.LETT., 16, 2006
2A41
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Ternary complex of the WH2 Domain of WIP with Actin-DNAse I
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Chereau, D, Kerff, F, Dominguez, R.
Deposit date:2005-06-27
Release date:2005-11-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Actin-bound structures of Wiskott-Aldrich syndrome protein (WASP)-homology domain 2 and the implications for filament assembly
Proc.Natl.Acad.Sci.Usa, 102, 2005
2A5H
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BU of 2a5h by Molmil
2.1 Angstrom X-ray crystal structure of lysine-2,3-aminomutase from Clostridium subterminale SB4, with Michaelis analog (L-alpha-lysine external aldimine form of pyridoxal-5'-phosphate).
Descriptor: IRON/SULFUR CLUSTER, L-lysine 2,3-aminomutase, LYSINE, ...
Authors:Lepore, B.W, Ruzicka, F.J, Frey, P.A, Ringe, D.
Deposit date:2005-06-30
Release date:2005-10-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The X-ray crystal structure of lysine-2,3-aminomutase from Clostridium subterminale.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2A92
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Crystal structure of lactate dehydrogenase from Plasmodium vivax: complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, L-lactate dehydrogenase
Authors:Chaikuad, A, Fairweather, V, Conners, R, Joseph-Horne, T, Turgut-Balik, D, Brady, R.L.
Deposit date:2005-07-11
Release date:2006-01-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of Lactate Dehydrogenase from Plasmodium vivax: Complexes with NADH and APADH.
Biochemistry, 44, 2005
2AAI
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Crystallographic refinement of ricin to 2.5 Angstroms
Descriptor: RICIN (A CHAIN), RICIN (B CHAIN), alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rutenber, E, Katzin, B.J, Montfort, W, Villafranca, J.E, Ernst, S.R, Collins, E.J, Mlsna, D, Monzingo, A.F, Ready, M.P, Robertus, J.D.
Deposit date:1993-09-07
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic refinement of ricin to 2.5 A.
Proteins, 10, 1991
2ABB
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Structure of PETN reductase Y186F in complex with cyanide
Descriptor: FLAVIN MONONUCLEOTIDE, ISOPROPYL ALCOHOL, THIOCYANATE ION, ...
Authors:Khan, H, Barna, T, Bruce, N.C, Munro, A.W, Leys, D, Scrutton, N.S.
Deposit date:2005-07-15
Release date:2005-10-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1 Å)
Cite:Proton transfer in the oxidative half-reaction of pentaerythritol tetranitrate reductase
Febs J., 272, 2005
2AE8
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Crystal Structure of Imidazoleglycerol-phosphate Dehydratase from Staphylococcus aureus subsp. aureus N315
Descriptor: Imidazoleglycerol-phosphate dehydratase, MAGNESIUM ION
Authors:Kim, Y, Quartey, P, Holzle, D, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-07-21
Release date:2005-09-06
Last modified:2015-05-20
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal Structure of Imidazoleglycerol-phosphate Dehydratase from Staphylococcus aureus subsp. aureus N315
To be Published
2ABR
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Structure of D280A arginine deiminase with L-arginine forming a S-alkylthiouronium reaction intermediate
Descriptor: Arginine deiminase
Authors:Galkin, A, Lu, X, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2005-07-15
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structures Representing the Michaelis Complex and the Thiouronium Reaction Intermediate of Pseudomonas aeruginosa Arginine Deiminase.
J.Biol.Chem., 280, 2005
2ACQ
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BU of 2acq by Molmil
AN ANION BINDING SITE IN HUMAN ALDOSE REDUCTASE: MECHANISTIC IMPLICATIONS FOR THE BINDING OF CITRATE, CACODYLATE, AND GLUCOSE-6-PHOSPHATE
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, ALDOSE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Harrison, D.H, Bohren, K.M, Gabbay, K.H, Petsko, G.A, Ringe, D.
Deposit date:1994-04-15
Release date:1994-07-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:An anion binding site in human aldose reductase: mechanistic implications for the binding of citrate, cacodylate, and glucose 6-phosphate.
Biochemistry, 33, 1994
2A1X
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Human phytanoyl-coa 2-hydroxylase in complex with iron and 2-oxoglutarate
Descriptor: 2-OXOGLUTARIC ACID, FE (II) ION, Phytanoyl-CoA dioxygenase
Authors:Kavanagh, K.L, McDonough, M.A, Searles, T, Butler, D, Bunkoczi, G, von Delft, F, Edwards, A, Arrowsmith, C, Sundstrom, M, Schofield, C.J, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2005-06-21
Release date:2005-08-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of Human Phytanoyl-CoA 2-Hydroxylase Identifies Molecular Mechanisms of Refsum Disease
J.Biol.Chem., 280, 2005
2BNK
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The structure of phage phi29 replication organizer protein p16.7
Descriptor: EARLY PROTEIN GP16.7
Authors:Albert, A, Asensio, J.L, Munoz-Espin, D, Gonzalez, C, Hermoso, J.A, Villar, L, Jimenez-Barbero, J, Salas, M, Meijer, W.J.J.
Deposit date:2005-03-28
Release date:2005-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the Functional Domain of {Varphi}29 Replication Organizer: Insights Into Oligomerization and DNA Binding.
J.Biol.Chem., 280, 2005

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