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PDB: 22297 results

2QTL
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Crystal Structure of the FAD-containing FNR-like Module of Human Methionine Synthase Reductase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Methionine synthase reductase
Authors:Wolthers, K.R, Lou, X, Toogood, H.S, Leys, D, Scrutton, N.S.
Deposit date:2007-08-02
Release date:2007-11-13
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of Coenzyme Binding to Human Methionine Synthase Reductase Revealed through the Crystal Structure of the FNR-like Module and Isothermal Titration Calorimetry
Biochemistry, 46, 2007
7M31
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Dihydropyrimidine Dehydrogenase (DPD) C671S Mutant Soaked with Thymine and NADPH Anaerobically
Descriptor: Dihydropyrimidine dehydrogenase [NADP(+)], FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Butrin, A, Beaupre, B, Forouzesh, D, Liu, D, Moran, G.
Deposit date:2021-03-18
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Perturbing the Movement of Hydrogens to Delineate and Assign Events in the Reductive Activation and Turnover of Porcine Dihydropyrimidine Dehydrogenase.
Biochemistry, 60, 2021
2QTZ
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Crystal Structure of the NADP+-bound FAD-containing FNR-like Module of Human Methionine Synthase Reductase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Methionine synthase reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wolthers, K.R, Lou, X, Toogood, H.S, Leys, D, Scrutton, N.S.
Deposit date:2007-08-02
Release date:2007-11-13
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of Coenzyme Binding to Human Methionine Synthase Reductase Revealed through the Crystal Structure of the FNR-like Module and Isothermal Titration Calorimetry
Biochemistry, 46, 2007
1DBY
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BU of 1dby by Molmil
NMR STRUCTURES OF CHLOROPLAST THIOREDOXIN M CH2 FROM THE GREEN ALGA CHLAMYDOMONAS REINHARDTII
Descriptor: CHLOROPLAST THIOREDOXIN M CH2
Authors:Lancelin, J.-M, Guilhaudis, L, Krimm, I, Blackledge, M.J, Marion, D.
Deposit date:1999-11-03
Release date:1999-11-08
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structures of thioredoxin m from the green alga Chlamydomonas reinhardtii.
Proteins, 41, 2000
7M32
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BU of 7m32 by Molmil
Dihydropyrimidine Dehydrogenase (DPD) C671A Mutant Soaked with Uracil and NADPH Anaerobically
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, ALANINE, Dihydropyrimidine dehydrogenase [NADP(+)], ...
Authors:Butrin, A, Beaupre, B, Forouzesh, D, Liu, D, Moran, G.
Deposit date:2021-03-18
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Perturbing the Movement of Hydrogens to Delineate and Assign Events in the Reductive Activation and Turnover of Porcine Dihydropyrimidine Dehydrogenase.
Biochemistry, 60, 2021
2QWT
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Crystal structure of the TetR transcription regulatory protein from Mycobacterium vanbaalenii
Descriptor: Transcriptional regulator, TetR family
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Adams, J, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-08-10
Release date:2007-08-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the TetR transcription regulatory protein from Mycobacterium vanbaalenii.
To be Published
2QWY
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SAM-II riboswitch bound to S-adenosylmethionine
Descriptor: CESIUM ION, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Gilbert, S.D, Rambo, R.P, Van Tyne, D, Batey, R.T.
Deposit date:2007-08-10
Release date:2008-01-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the SAM-II riboswitch bound to S-adenosylmethionine.
Nat.Struct.Mol.Biol., 15, 2008
2QY1
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pectate lyase A31G/R236F from Xanthomonas campestris
Descriptor: PHOSPHATE ION, Pectate lyase II
Authors:Garron, M.L, Shaya, D.
Deposit date:2007-08-13
Release date:2008-02-26
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Improvement of the thermostability and activity of a pectate lyase by single amino acid substitutions, using a strategy based on melting-temperature-guided sequence alignment.
Appl.Environ.Microbiol., 74, 2008
1DN4
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SOLVATION OF THE LEFT-HANDED HEXAMER D(5BRC-G-5BRC-G-5BRC-G) IN CRYSTALS GROWN AT TWO TEMPERATURES
Descriptor: DNA (5'-D(*(CBR)P*GP*(CBR)P*GP*(CBR)P*G)-3')
Authors:Chevrier, B, Dock, A.C, Hartmann, B, Leng, M, Moras, D, Thuong, M.T, Westhof, E.
Deposit date:1986-12-01
Release date:1987-04-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Solvation of the left-handed hexamer d(5BrC-G-5BrC-G-5 BrC-G) in crystals grown at two temperatures.
J.Mol.Biol., 188, 1986
1DDG
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CRYSTAL STRUCTURE OF SIR-FP60
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, SULFITE REDUCTASE (NADPH) FLAVOPROTEIN ALPHA-COMPONENT
Authors:Gruez, A, Pignol, D, Zeghouf, M, Coves, J, Fontecave, M, Ferrer, J.L, Fontecilla-Camps, J.C.
Deposit date:1999-11-10
Release date:2000-11-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Four crystal structures of the 60 kDa flavoprotein monomer of the sulfite reductase indicate a disordered flavodoxin-like module.
J.Mol.Biol., 299, 2000
2QTI
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BU of 2qti by Molmil
Crystal structure of the UPF0352 protein SO_2176 from Shewanella oneidensis. NESG target SoR77.
Descriptor: UPF0352 protein SO_2176
Authors:Vorobiev, S.M, Su, M, Seetharaman, J, Kuzin, A.P, Wang, D, Cunningham, K, Owens, L, Maglaqui, M, Fang, Y, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-08-02
Release date:2007-08-21
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the UPF0352 protein SO_2176 from Shewanella oneidensis.
To be Published
2OLU
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BU of 2olu by Molmil
Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Apoenzyme
Descriptor: 1,2-ETHANEDIOL, Penicillin-binding protein 2
Authors:Lovering, A.L, De Castro, L.H, Lim, D, Strynadka, N.C.
Deposit date:2007-01-19
Release date:2007-03-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insight into the transglycosylation step of bacterial cell-wall biosynthesis.
Science, 315, 2007
1DGM
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BU of 1dgm by Molmil
CRYSTAL STRUCTURE OF ADENOSINE KINASE FROM TOXOPLASMA GONDII
Descriptor: ACETIC ACID, ADENOSINE, ADENOSINE KINASE, ...
Authors:Cook, W.J, DeLucas, L.J, Chattopadhyay, D.
Deposit date:1999-11-24
Release date:2000-11-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of adenosine kinase from Toxoplasma gondii at 1.8 A resolution.
Protein Sci., 9, 2000
2OLV
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BU of 2olv by Molmil
Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex
Descriptor: MOENOMYCIN, Penicillin-binding protein 2
Authors:Lovering, A.L, De Castro, L, Lim, D, Strynadka, N.C.J.
Deposit date:2007-01-19
Release date:2007-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insight into the transglycosylation step of bacterial cell-wall biosynthesis.
Science, 315, 2007
2OO4
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BU of 2oo4 by Molmil
Structure of LNR-HD (Negative Regulatory Region) from human Notch 2
Descriptor: CALCIUM ION, GLYCEROL, Neurogenic locus notch homolog protein 2, ...
Authors:Gordon, W.R, Vardar-Ulu, D, Histen, G, Sanchez-Irizarry, C, Aster, J.C, Blacklow, S.C.
Deposit date:2007-01-25
Release date:2007-04-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural basis for autoinhibition of Notch
Nat.Struct.Mol.Biol., 14, 2007
1A3Z
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BU of 1a3z by Molmil
REDUCED RUSTICYANIN AT 1.9 ANGSTROMS
Descriptor: COPPER (I) ION, RUSTICYANIN
Authors:Zhao, D, Shoham, M.
Deposit date:1998-01-27
Release date:1998-07-29
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rusticyanin: Extremes in acid stability and redox potential explained by the crystal structure.
Biophys.J., 74, 1998
1A56
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BU of 1a56 by Molmil
PRIMARY SEQUENCE AND SOLUTION CONFORMATION OF FERRICYTOCHROME C-552 FROM NITROSOMONAS EUROPAEA, NMR, MEAN STRUCTURE REFINED WITH EXPLICIT HYDROGEN BOND CONSTRAINTS
Descriptor: FERRICYTOCHROME C-552, HEME C
Authors:Timkovich, R, Bergmann, D, Arciero, D.M, Hooper, A.B.
Deposit date:1998-02-20
Release date:1998-10-21
Last modified:2020-12-16
Method:SOLUTION NMR
Cite:Primary sequence and solution conformation of ferrocytochrome c-552 from Nitrosomonas europaea.
Biophys.J., 75, 1998
1A69
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BU of 1a69 by Molmil
PURINE NUCLEOSIDE PHOSPHORYLASE IN COMPLEX WITH FORMYCIN B AND SULPHATE (PHOSPHATE)
Descriptor: FORMYCIN B, PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION
Authors:Koellner, G, Luic, M, Shugar, D, Saenger, W, Bzowska, A.
Deposit date:1998-03-08
Release date:1998-10-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the ternary complex of E. coli purine nucleoside phosphorylase with formycin B, a structural analogue of the substrate inosine, and phosphate (Sulphate) at 2.1 A resolution.
J.Mol.Biol., 280, 1998
151D
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BU of 151d by Molmil
DIVERSITY OF WATER RING SIZE AT DNA INTERFACES: HYDRATION AND DYNAMICS OF DNA-ANTHRACYCLINE COMPLEXES
Descriptor: DNA (5'-D(*CP*GP*AP*TP*CP*G)-3'), DOXORUBICIN
Authors:Lipscomb, L.A, Peek, M.E, Zhou, F.X, Bertrand, J.A, VanDerveer, D, Williams, L.D.
Deposit date:1993-12-13
Release date:1994-05-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Water ring structure at DNA interfaces: hydration and dynamics of DNA-anthracycline complexes.
Biochemistry, 33, 1994
2OL0
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BU of 2ol0 by Molmil
High Resolution Crystal Structures of Vaccinia Virus dUTPase
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DEOXYURIDINE-5'-DIPHOSPHATE, ...
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2007-01-18
Release date:2007-05-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of vaccinia virus dUTPase and its nucleotide complexes.
Acta Crystallogr.,Sect.D, 63, 2007
1A3M
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BU of 1a3m by Molmil
PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES
Descriptor: 16S RRNA (5'-R(*GP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*UP*UP*C)-3'), 16S RRNA (5'-R(*GP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*C)-3')
Authors:Fourmy, D, Yoshizawa, S, Puglisi, J.D.
Deposit date:1998-01-22
Release date:1998-04-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Paromomycin binding induces a local conformational change in the A-site of 16 S rRNA.
J.Mol.Biol., 277, 1998
2ON9
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Structure of an amyloid forming peptide VQIVYK from the repeat region of Tau
Descriptor: VQIVYK peptide corresponding to residues 306-311 in the tau protein
Authors:Sambashivan, S, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-23
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2ONX
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NNQQ peptide corresponding to residues 8-11 of yeast prion sup35 (alternate crystal form)
Descriptor: peptide corresponding to residues 8-11 of yeast prion sup35
Authors:Sawaya, M.R, Sambashivan, S, Nelson, R, Ivanova, M, Sievers, S.A, Apostol, M.I, Thompson, M.J, Balbirnie, M, Wiltzius, J.J, McFarlane, H, Madsen, A.O, Riekel, C, Eisenberg, D.
Deposit date:2007-01-24
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2ETI
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BU of 2eti by Molmil
USE OF RESTRAINED MOLECULAR DYNAMICS IN WATER TO DETERMINE THREE-DIMENSIONAL PROTEIN STRUCTURE: PREDICTION OF THE THREE-DIMENSIONAL STRUCTURE OF ECBALLIUM ELATERIUM TRYPSIN INHIBITOR II
Descriptor: TRYPSIN INHIBITOR II
Authors:Heitz, A, Chiche, L, Le-Nguyen, D, Castro, B.
Deposit date:1991-07-15
Release date:1991-10-15
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Use of restrained molecular dynamics in water to determine three-dimensional protein structure: prediction of the three-dimensional structure of Ecballium elaterium trypsin inhibitor II.
Proteins, 6, 1989
2OPX
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BU of 2opx by Molmil
Crystal Structure of Lactaldehyde Dehydrogenase from Escherichia coli
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, Aldehyde dehydrogenase A
Authors:Francuski, D, Rossocha, M, Saenger, W.
Deposit date:2007-01-30
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal Structure of Lactaldehyde Dehydrogenase from Escherichia coli
To be Published

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