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PDB: 22297 results

8DOI
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BU of 8doi by Molmil
Dehaloperoxidase B in complex with 2,2'-Biphenol
Descriptor: 2-(2-hydroxyphenyl)phenol, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:de Serrano, V.S, Yun, D, Ghiladi, R.
Deposit date:2022-07-13
Release date:2022-11-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Oxidation of bisphenol A (BPA) and related compounds by the multifunctional catalytic globin dehaloperoxidase.
J.Inorg.Biochem., 238, 2023
8AJA
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BU of 8aja by Molmil
Structure of the Ancestral Scaffold Antigen-5 of Coronavirus Spike protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin
Authors:Hueting, D, Schriever, K, Wallden, K, Andrell, J, Syren, P.O.
Deposit date:2022-07-27
Release date:2023-08-16
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:Design, structure and plasma binding of ancestral beta-CoV scaffold antigens.
Nat Commun, 14, 2023
5MEV
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BU of 5mev by Molmil
MCL1 FAB COMPLEX IN COMPLEX WITH COMPOUND 21
Descriptor: (5~{R},13~{S},17~{S})-5-[(3,4-dichlorophenyl)methyl]-8-methyl-13-[(4-methylsulfonylphenyl)methyl]-1,4,8,12,16-pentazatricyclo[15.8.1.0^{20,25}]hexacosa-20,22,24-triene-3,7,15,26-tetrone, Fab Heavy Chain, Fab Light Chain, ...
Authors:Hargreaves, D.
Deposit date:2016-11-16
Release date:2017-01-18
Last modified:2017-03-08
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structure Based Design of Non-Natural Peptidic Macrocyclic Mcl-1 Inhibitors
Acs Med.Chem.Lett., 8, 2017
5MG7
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BU of 5mg7 by Molmil
New Insights into the Role of DNA Shape on Its Recognition by p53 Proteins (complex p53DBD-p53R2)
Descriptor: Cellular tumor antigen p53, DNA, ZINC ION
Authors:Rozenberg, H, Braeuning, B, Golovenko, D, Shakked, Z.
Deposit date:2016-11-21
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:New Insights into the Role of DNA Shape on Its Recognition by p53 Proteins.
Structure, 26, 2018
5MGF
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BU of 5mgf by Molmil
Crystal Structure of BAZ2B bromodomain in complex with 4-propionyl-pyrrole derivative 2
Descriptor: Bromodomain adjacent to zinc finger domain protein 2B, methyl 4-propanoyl-1~{H}-pyrrole-2-carboxylate
Authors:Lolli, G, Spiliotopoulos, D, Caflisch, A.
Deposit date:2016-11-21
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of BAZ2A bromodomain ligands.
Eur J Med Chem, 139, 2017
5MGI
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BU of 5mgi by Molmil
Crystal structure of KPC-2 carbapenemase in complex with a phenyl boronic inhibitor.
Descriptor: (~{E})-3-[2-(dihydroxyboranyl)phenyl]prop-2-enoic acid, Carbapenem-hydrolyzing beta-lactamase KPC
Authors:Vicario, M, Celenza, G, Bellio, P, Perilli, M.G, Tondi, D, Cendron, L.
Deposit date:2016-11-21
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Phenylboronic Acid Derivatives as Validated Leads Active in Clinical Strains Overexpressing KPC-2: A Step against Bacterial Resistance.
Chemmedchem, 13, 2018
5MGM
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BU of 5mgm by Molmil
Crystal Structure of BAZ2A bromodomain in complex with acetophenone derivative 4
Descriptor: 1-(3-pyrimidin-2-yloxyphenyl)ethanone, Bromodomain adjacent to zinc finger domain protein 2A
Authors:Lolli, G, Spiliotopoulos, D, Caflisch, A.
Deposit date:2016-11-21
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of BAZ2A bromodomain ligands.
Eur J Med Chem, 139, 2017
7BW7
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BU of 7bw7 by Molmil
Cryo-EM Structure for the Ectodomain of the Full-length Human Insulin Receptor in Complex with 1 Insulin.
Descriptor: Insulin fusion, Insulin receptor
Authors:Yu, D, Zhang, X, Sun, J, Li, X, Wu, Z, Han, X, Fan, C, Ma, Y, Ouyang, Q, Wang, T.
Deposit date:2020-04-13
Release date:2021-04-14
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Insulin Binding Induced the Ectodomain Conformational Dynamics in the Full-length Human Insulin Receptor
To Be Published
5MMJ
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BU of 5mmj by Molmil
Structure of the small subunit of the chloroplast ribosome
Descriptor: 16S ribosomal RNA, 30S ribosomal protein 2, chloroplastic, ...
Authors:Bieri, P, Leibundgut, M, Saurer, M, Boehringer, D, Ban, N.
Deposit date:2016-12-10
Release date:2017-01-11
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The complete structure of the chloroplast 70S ribosome in complex with translation factor pY.
EMBO J., 36, 2017
7BW8
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BU of 7bw8 by Molmil
Cryo-EM Structure for the Insulin Binding Region in the Ectodomain of the Full-length Human Insulin Receptor in Complex with 1 Insulin
Descriptor: Insulin fusion, Insulin receptor
Authors:Yu, D, Zhang, X, Sun, J, Li, X, Wu, Z, Han, X, Fan, C, Ma, Y, Ouyang, Q, Wang, T.
Deposit date:2020-04-14
Release date:2021-04-14
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Insulin Binding Induced the Ectodomain Conformational Dynamics in the Full-length Human Insulin Receptor
To Be Published
7BWZ
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BU of 7bwz by Molmil
Crystal structure of RTT109 from CANDIDA ALBICANS
Descriptor: Histone acetyltransferase RTT109
Authors:Chen, Y.P, Lei, J.H, Su, D.
Deposit date:2020-04-16
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of RTT109 from CANDIDA ALBICANS
To Be Published
7BWW
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BU of 7bww by Molmil
Structure of the engineered metallo-Diels-Alderase DA7 W16S
Descriptor: ACETIC ACID, BENZOIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Basler, S, Mori, T, Hilvert, D.
Deposit date:2020-04-16
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Efficient Lewis acid catalysis of an abiological reaction in a de novo protein scaffold.
Nat.Chem., 13, 2021
8EDT
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BU of 8edt by Molmil
E. coli Pyruvate kinase (PykF) T462I
Descriptor: Pyruvate kinase
Authors:Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
Deposit date:2022-09-05
Release date:2022-11-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
5UJL
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BU of 5ujl by Molmil
Representative 1-conformer ensembles of K27-linked Ub2 from RDC data
Descriptor: Ubiquitin
Authors:Castaneda, C.A, Fushman, D.
Deposit date:2017-01-18
Release date:2017-10-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Linkage via K27 Bestows Ubiquitin Chains with Unique Properties among Polyubiquitins.
Structure, 24, 2016
7BX1
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BU of 7bx1 by Molmil
Crystal structure of RTT109 from Candida albicans
Descriptor: ACETAMIDE, Histone acetyltransferase RTT109
Authors:Chen, Y.P, Lei, J.H, Lu, D.R, Su, D.
Deposit date:2020-04-16
Release date:2021-04-21
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of RTT109 from Candida albicans
To Be Published
7BX0
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BU of 7bx0 by Molmil
Crystal structure of RTT109 from Candida albicans
Descriptor: Histone acetyltransferase RTT109
Authors:Lei, J.H, Chen, Y.P, Lu, D.R, Su, D.
Deposit date:2020-04-16
Release date:2021-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of RTT109 from Candida albicans
To Be Published
5NP6
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BU of 5np6 by Molmil
70S structure prior to bypassing
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Samatova, E, Klimova, M, Zamora, M, Gil-Carton, D, Rodnina, M, Valle, M.
Deposit date:2017-04-13
Release date:2017-06-14
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Ribosome rearrangements at the onset of translational bypassing.
Sci Adv, 3, 2017
8E3X
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BU of 8e3x by Molmil
Cryo-EM structure of the PAC1R-PACAP27-Gs complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Piper, S.J, Danev, R, Sexton, P, Wootten, D.
Deposit date:2022-08-17
Release date:2022-11-23
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Understanding VPAC receptor family peptide binding and selectivity.
Nat Commun, 13, 2022
8EDS
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BU of 8eds by Molmil
Escherichia coli pyruvate kinase (PykF) P70Q
Descriptor: Pyruvate kinase, SULFATE ION
Authors:Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
Deposit date:2022-09-05
Release date:2022-11-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
7BA2
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BU of 7ba2 by Molmil
D319A mutant of the PilB minor pilin from Streptococcus sanguinis
Descriptor: Type IV pilus biogenesis protein PilB
Authors:Pelicic, V, Sheppard, D.
Deposit date:2020-12-15
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:PilB from Streptococcus sanguinis is a bimodular type IV pilin with a direct role in adhesion.
Proc.Natl.Acad.Sci.USA, 118, 2021
5N8F
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BU of 5n8f by Molmil
Serial Cu nitrite reductase structures at elevated cryogenic temperature, 240K. Dataset 1.
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, SULFATE ION
Authors:Horrell, S, Kekilli, D, Hough, M, Strange, R.
Deposit date:2017-02-23
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Active-site protein dynamics and solvent accessibility in native Achromobacter cycloclastes copper nitrite reductase.
IUCrJ, 4, 2017
8EDR
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BU of 8edr by Molmil
E. coli pyruvate kinase (PykF) P70Q
Descriptor: Pyruvate kinase, SULFATE ION
Authors:Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
Deposit date:2022-09-05
Release date:2022-11-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
5MZ7
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BU of 5mz7 by Molmil
Crystal Structure of the third PDZ domain from the synaptic protein PSD-95 with incorporated Azidohomoalanine
Descriptor: Disks large homolog 4
Authors:Kudlinzki, D, Lehner, F, Witt, K, Linhard, V.L, Silvers, R, Schwalbe, H.
Deposit date:2017-01-31
Release date:2017-10-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Impact of Azidohomoalanine Incorporation on Protein Structure and Ligand Binding.
Chembiochem, 18, 2017
8DOF
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BU of 8dof by Molmil
Pseudomonas aeruginosa MurC with WYH9-2-P - OSA_001044
Descriptor: (2R)-2-cyclohexyl-2-[(4-{[5-(propan-2-yl)-1H-pyrazol-3-yl]amino}-1H-pyrazolo[3,4-d]pyrimidin-6-yl)amino]ethan-1-ol, 1,2-ETHANEDIOL, SULFATE ION, ...
Authors:Horanyi, P.S, Wang, Y, Todd, M.H, Abendroth, J, Edwards, T, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2022-07-13
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Pseudomonas aeruginosa MurC with WYH9-2-P - OSA_001044
To Be Published
2HB0
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BU of 2hb0 by Molmil
Crystal Structure of CfaE, the Adhesive Subunit of CFA/I Fimbria of Enterotoxigenic Escherichia coli
Descriptor: CFA/I fimbrial subunit E, DI(HYDROXYETHYL)ETHER, MALONATE ION
Authors:Li, Y.F, Xia, D, Poole, S, Rasulova, F, Savarino, S.J.
Deposit date:2006-06-13
Release date:2007-06-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A receptor-binding site as revealed by the crystal structure of CfaE, the colonization factor antigen I fimbrial adhesin of enterotoxigenic Escherichia coli.
J.Biol.Chem., 282, 2007

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