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PDB: 22600 results

7P64
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Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 6, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-15
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
5EGW
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2.70 A crystal structure of the Amb a 11 cysteine protease, a major ragweed pollen allergen, in its proform
Descriptor: Cysteine protease
Authors:Briozzo, P, Kopecny, D.
Deposit date:2015-10-27
Release date:2016-04-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Functional Characterization of the Major Allergen Amb a 11 from Short Ragweed Pollen.
J.Biol.Chem., 291, 2016
7P7C
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BU of 7p7c by Molmil
Complex I from E. coli, DDM/LMNG-purified, Apo, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7P7E
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BU of 7p7e by Molmil
Complex I from E. coli, DDM/LMNG-purified, Apo, Resting state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7P7J
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BU of 7p7j by Molmil
Complex I from E. coli, DDM/LMNG-purified, with DQ, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
1VEQ
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BU of 1veq by Molmil
Mycobacterium smegmatis Dps Hexagonal form
Descriptor: FE (III) ION, starvation-induced DNA protecting protein
Authors:Roy, S, Gupta, S, Das, S, Sekar, K, Chatterji, D, Vijayan, M.
Deposit date:2004-04-03
Release date:2004-06-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.98 Å)
Cite:X-ray analysis of Mycobacterium smegmatis Dps and a comparative study involving other Dps and Dps-like molecules
J.Mol.Biol., 339, 2004
7PBL
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BU of 7pbl by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
5EPW
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BU of 5epw by Molmil
C-Terminal Domain Of Human Coronavirus Nl63 Nucleocapsid Protein
Descriptor: Nucleoprotein
Authors:Szelazek, B, Kabala, W, Kus, K, Zdzalik, M, Golik, P, Florek, D, Burmistrz, M, Pyrc, K, Dubin, G.
Deposit date:2015-11-12
Release date:2017-02-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Characterization of Human Coronavirus NL63 N Protein.
J. Virol., 91, 2017
7P7M
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BU of 7p7m by Molmil
Complex I from E. coli, DDM/LMNG-purified, inhibited by Piericidin A, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7PBO
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BU of 7pbo by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s4 [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
5CX7
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BU of 5cx7 by Molmil
Crystal Structure of PduOC:Heme Complex
Descriptor: ATP:cob(I)alamin adenosyltransferase, CHLORIDE ION, GLYCEROL, ...
Authors:Geremia, S, Hickey, N, Ortiz de Orue Lucana, D.
Deposit date:2015-07-28
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The Crystal Structure of the C-Terminal Domain of the Salmonella enterica PduO Protein: An Old Fold with a New Heme-Binding Mode.
Front Microbiol, 7, 2016
7PBP
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BU of 7pbp by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s5 [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
7PBM
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BU of 7pbm by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s2 [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
1VSU
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BU of 1vsu by Molmil
Crystal Structure of Apo-glyceraldehyde 3-phosphate dehydrogenase from Cryptosporidium parvum
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Cook, W.J, Senkovich, O, Chattopadhyay, D.
Deposit date:2008-03-10
Release date:2009-03-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An unexpected phosphate binding site in Glyceraldehyde 3-Phosphate Dehydrogenase: Crystal structures of apo, holo and ternary complex of Cryptosporidium parvum enzyme
BMC STRUCT.BIOL., 9, 2009
1W9H
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BU of 1w9h by Molmil
The Structure of a Piwi protein from Archaeoglobus fulgidus.
Descriptor: CADMIUM ION, CHLORIDE ION, HYPOTHETICAL PROTEIN AF1318, ...
Authors:Parker, J.S, Roe, S.M, Barford, D.
Deposit date:2004-10-13
Release date:2005-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of a Piwi Protein Suggests Mechanisms for Sirna Recognition and Slicer Activity
Embo J., 23, 2004
7PBQ
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BU of 7pbq by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Goessweiner-Mohr, N, Fahrenkamp, D, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
1W1H
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BU of 1w1h by Molmil
Crystal Structure of the PDK1 Pleckstrin Homology (PH) domain
Descriptor: 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1, GLYCEROL, SULFATE ION
Authors:Komander, D, Deak, M, Alessi, D.R, Van Aalten, D.M.F.
Deposit date:2004-06-21
Release date:2004-11-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Insights Into the Regulation of Pdk1 by Phosphoinositides and Inositol Phosphates
Embo J., 23, 2004
5DBN
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BU of 5dbn by Molmil
Crystal structure of AtoDA complex
Descriptor: Acetate CoA-transferase subunit alpha, Acetate CoA-transferase subunit beta, CHLORIDE ION, ...
Authors:Arbing, M.A, Koo, C.W, Shin, A, Medrano-Soto, A, Eisenberg, D.
Deposit date:2015-08-21
Release date:2016-08-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.549 Å)
Cite:Crystal structure of AtoDA complex
To Be Published
7OYA
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BU of 7oya by Molmil
Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
Authors:Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
Deposit date:2021-06-24
Release date:2022-07-13
Last modified:2023-02-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
7PBN
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BU of 7pbn by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s3 [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
5DCN
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BU of 5dcn by Molmil
Crystal structure of LC3 in complex with TECPR2 LIR
Descriptor: Microtubule-associated proteins 1A/1B light chain 3B, SULFATE ION
Authors:Stadel, D, Huber, J, Dotsch, V, Rogov, V.V, Behrends, C, Akutsu, M.
Deposit date:2015-08-24
Release date:2016-03-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:TECPR2 Cooperates with LC3C to Regulate COPII-Dependent ER Export.
Mol.Cell, 60, 2015
1W5W
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BU of 1w5w by Molmil
HIV-1 protease in complex with fluoro substituted diol-based C2- symmetric inhibitor
Descriptor: (2R,3R,4R,5R)-2,5-BIS[(2,4-DIFLUOROBENZYL)OXY]-3,4-DIHYDROXY-N,N'-BIS[(1R,2S)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YL]HEXAN EDIAMIDE, POL POLYPROTEIN
Authors:Lindberg, J, Pyring, D, Loewgren, S, Rosenquist, A, Zuccarello, G, Kvarnstroem, I, Zhang, H, Vrang, L, Claesson, B, Hallberg, A, Samuelsson, B, Unge, T.
Deposit date:2004-08-10
Release date:2004-12-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Symmetric Fluoro-Substituted Diol-Based HIV Protease Inhibitors. Ortho-Fluorinated and Meta-Fluorinated P1/P1'-Benzyloxy Side Groups Significantly Improve the Antiviral Activity and Preserve Binding Efficacy
Eur.J.Biochem., 271, 2004
1W0T
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BU of 1w0t by Molmil
hTRF1 DNA-binding domain in complex with telomeric DNA.
Descriptor: 5'-D(*CP*TP*GP*TP*TP*AP*GP*GP*GP*TP *TP*AP*GP*GP*GP*TP*TP*AP*G)-3', 5'-D(*TP*CP*TP*AP*AP*CP*CP*CP*TP*AP *AP*CP*CP*CP*TP*AP*AP*CP*A)-3', TELOMERIC REPEAT BINDING FACTOR 1
Authors:Court, R.I, Chapman, L.M, Fairall, L, Rhodes, D.
Deposit date:2004-06-11
Release date:2004-12-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:How the Human Telomeric Proteins Trf1 and Trf2 Recognize Telomeric DNA: A View from High-Resolution Crystal Structures
Embo Rep., 6, 2005
7OYB
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BU of 7oyb by Molmil
Cryo-EM structure of the 6 hpf zebrafish embryo 80S ribosome
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
Authors:Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
Deposit date:2021-06-24
Release date:2022-07-13
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
5FJV
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BU of 5fjv by Molmil
Crystal structure of the extracellular domain of alpha2 nicotinic acetylcholine receptor in pentameric assembly
Descriptor: EPIBATIDINE, NEURONAL ACETYLCHOLINE RECEPTOR SUBUNIT ALPHA-2
Authors:Giastas, P, Kouvatsos, N, Chroni-Tzartou, D, Tzartos, S.J.
Deposit date:2015-10-13
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of a Human Neuronal Nachr Extracellular Domain in Pentameric Assembly: Ligand-Bound Alpah2 Homopentamer.
Proc.Natl.Acad.Sci.USA, 113, 2016

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