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PDB: 22424 results

4G75
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Structure of PaeM, a colicin M-like bacteriocin produced by Pseudomonas aeruginosa
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, phosphodiesterase
Authors:Touze, T, Graille, M, Mengin-Lecreulx, D.
Deposit date:2012-07-20
Release date:2012-09-12
Last modified:2012-11-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Functional and Structural Characterization of PaeM, a Colicin M-like Bacteriocin Produced by Pseudomonas aeruginosa.
J.Biol.Chem., 287, 2012
6OTY
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BU of 6oty by Molmil
Crystallographic Structure of (HbII-HbIII)-O2 from Lucina pectinata at pH 4.0
Descriptor: Hemoglobin II, Hemoglobin III, PROTOPORPHYRIN IX CONTAINING FE
Authors:Marchany-Rivera, D, Smith, C.A, Rodriguez-Perez, J.D, Lopez-Garriga, J.
Deposit date:2019-05-03
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Lucina pectinata oxyhemoglobin (II-III) heterodimer pH susceptibility.
J.Inorg.Biochem., 207, 2020
1VDY
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NMR Structure of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana
Descriptor: hypothetical protein (RAFL09-17-B18)
Authors:Lopez-Mendez, B, Pantoja-Uceda, D, Tomizawa, T, Koshiba, S, Kigawa, T, Shirouzu, M, Terada, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Seki, M, Shinozaki, K, Yokoyama, S, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-25
Release date:2005-05-03
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the hypothetical ENTH-VHS domain AT3G16270 from arabidopsis thaliana
To be Published
4GKP
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BU of 4gkp by Molmil
Structure of the truncated neck and C-terminal motor homology domain of ViK1 from Candida glabrata
Descriptor: Spindle pole body-associated protein VIK1
Authors:Duan, D, Allingham, J.S.
Deposit date:2012-08-13
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Neck Rotation and Neck Mimic Docking in the Noncatalytic Kar3-associated Protein Vik1.
J.Biol.Chem., 287, 2012
5GVX
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Structural insight into dephosphorylation by Trehalose 6-phosphate Phosphatase (OtsB2) from Mycobacterium Tuberculosis
Descriptor: MAGNESIUM ION, Trehalose-phosphate phosphatase
Authors:Shan, S, Min, H, Liu, T, Jiang, D, Rao, Z.
Deposit date:2016-09-07
Release date:2017-09-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Structural insight into dephosphorylation by trehalose 6-phosphate phosphatase (OtsB2) from Mycobacterium tuberculosis.
FASEB J., 30, 2016
1AUD
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U1A-UTRRNA, NMR, 31 STRUCTURES
Descriptor: RNA 3UTR, U1A 102
Authors:Allain, F.H.-T, Gubser, C.C, Howe, P.W.A, Nagai, K, Neuhaus, D, Varani, G.
Deposit date:1997-08-22
Release date:1998-02-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis of the RNA-binding specificity of human U1A protein.
EMBO J., 16, 1997
7P63
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BU of 7p63 by Molmil
Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 6, Closed state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-15
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7P62
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Complex I from E. coli, DDM-purified, Apo, Resting state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-15
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7P69
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BU of 7p69 by Molmil
Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 6, Resting state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-15
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7P7L
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BU of 7p7l by Molmil
Complex I from E. coli, DDM/LMNG-purified, with NADH and FMN, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7P61
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BU of 7p61 by Molmil
Complex I from E. coli, DDM-purified, with NADH, Resting state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-15
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7P64
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Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 6, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-15
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7P7C
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BU of 7p7c by Molmil
Complex I from E. coli, DDM/LMNG-purified, Apo, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7P7E
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BU of 7p7e by Molmil
Complex I from E. coli, DDM/LMNG-purified, Apo, Resting state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7PBL
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BU of 7pbl by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
7P7J
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BU of 7p7j by Molmil
Complex I from E. coli, DDM/LMNG-purified, with DQ, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
6O7W
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BU of 6o7w by Molmil
Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 2
Descriptor: Putative protein YPR170W-B, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Vasanthakumar, T, Bueler, S.A, Wu, D, Beilsten-Edmands, V, Robinson, C.V, Rubinstein, J.L.
Deposit date:2019-03-08
Release date:2019-04-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural comparison of the vacuolar and Golgi V-ATPases fromSaccharomyces cerevisiae.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
7PBO
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BU of 7pbo by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s4 [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
7P7M
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BU of 7p7m by Molmil
Complex I from E. coli, DDM/LMNG-purified, inhibited by Piericidin A, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
6OQE
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BU of 6oqe by Molmil
X-ray structure of H6N6-NS1 delta(80-84) R38A K41A mutant
Descriptor: Non-structural protein 1
Authors:Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
Deposit date:2019-04-26
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.899 Å)
Cite:Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
7P7K
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BU of 7p7k by Molmil
Complex I from E. coli, DDM/LMNG-purified, with DQ, Resting state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7PBM
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BU of 7pbm by Molmil
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s2 [t2 dataset]
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ...
Authors:Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C.
Deposit date:2021-08-02
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration.
Nature, 609, 2022
8Q7S
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BU of 8q7s by Molmil
Crystal structure of the SARS-CoV-2 RBD (Wuhan) with neutralizing VHHs Ma6F06 and Re21H01
Descriptor: 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, GLYCEROL, ...
Authors:Guttler, T, Aksu, M, Gorlich, D.
Deposit date:2023-08-16
Release date:2023-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Nanobodies to multiple spike variants and inhalation of nanobody-containing aerosols neutralize SARS-CoV-2 in cell culture and hamsters.
Antiviral Res., 221, 2023
6OFZ
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Crystal structure of human WDR5
Descriptor: WD repeat-containing protein 5
Authors:Lorton, B.M, Harijan, R.K, Burgos, E, Bonanno, J.B, Almo, S.C, Shechter, D.
Deposit date:2019-04-01
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Binary Arginine Methylation Switch on Histone H3 Arginine 2 Regulates Its Interaction with WDR5.
Biochemistry, 59, 2020
1W1D
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Crystal Structure of the PDK1 Pleckstrin Homology (PH) domain bound to Inositol (1,3,4,5)-tetrakisphosphate
Descriptor: 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1, GLYCEROL, GOLD ION, ...
Authors:Komander, D, Deak, M, Alessi, D.R, Van Aalten, D.M.F.
Deposit date:2004-06-21
Release date:2004-11-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Insights Into the Regulation of Pdk1 by Phosphoinositides and Inositol Phosphates
Embo J., 23, 2004

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