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PDB: 53878 results

5IQJ
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1.9 Angstrom Crystal Structure of Protein with Unknown Function from Vibrio cholerae.
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Minasov, G, Wawrzak, Z, Stogios, P.J, Skarina, T, Seed, K.D, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-03-10
Release date:2016-03-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:1.9 Angstrom Crystal Structure of Protein with Unknown Function from Vibrio cholerae.
To Be Published
6V0L
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BU of 6v0l by Molmil
PDGFR-b Promoter Forms a G-Vacancy Quadruplex that Can be Complemented by dGMP: Molecular Structure and Recognition of Guanine Derivatives and Metabolites
Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, DNA (5'-D(*(3D1)P*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*AP*CP*A)-3')
Authors:Wang, K.B, Dickerhoff, J, Wu, G, Yang, D.
Deposit date:2019-11-18
Release date:2020-03-11
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:PDGFR-beta Promoter Forms a Vacancy G-Quadruplex that Can Be Filled in by dGMP: Solution Structure and Molecular Recognition of Guanine Metabolites and Drugs.
J.Am.Chem.Soc., 142, 2020
6PQ3
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Crystal structure of GDP-bound KRAS with ten residues long internal tandem duplication in the switch II region
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Dharmaiah, S, Chan, A.H, Tran, T.H, Simanshu, D.K.
Deposit date:2019-07-08
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:RASinternal tandem duplication disrupts GTPase-activating protein (GAP) binding to activate oncogenic signaling.
J.Biol.Chem., 295, 2020
4Y4O
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BU of 4y4o by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Polikanov, Y.S, Melnikov, S.V, Soll, D, Steitz, T.A.
Deposit date:2015-02-10
Release date:2015-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.
Nat.Struct.Mol.Biol., 22, 2015
6YM5
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BU of 6ym5 by Molmil
Crystal structure of BAY-091 with PIP4K2A
Descriptor: (2~{R})-2-[[3-cyano-2-[4-(2-fluoranyl-3-methyl-phenyl)phenyl]-1,7-naphthyridin-4-yl]amino]butanoic acid, PHOSPHATE ION, Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
Authors:Holton, S.J, Wortmann, L, Braeuer, N, Irlbacher, H, Weiske, J, Lechner, C, Meier, R, Puetter, V, Christ, C, ter Laak, T, Lienau, P, Lesche, R, Nicke, B, Bauser, M, Haegebarth, A, von Nussbaum, F, Mumberg, D, Lemos, C.
Deposit date:2020-04-07
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery and Characterization of the Potent and Highly Selective 1,7-Naphthyridine-Based Inhibitors BAY-091 and BAY-297 of the Kinase PIP4K2A.
J.Med.Chem., 64, 2021
4YAH
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BU of 4yah by Molmil
Crystal Structure of the Methionine Binding Protein, MetQ
Descriptor: D-methionine-binding lipoprotein MetQ, METHIONINE
Authors:Lai, J.Y, Kadaba, N.S, Kaiser, J.T, Rees, D.C.
Deposit date:2015-02-17
Release date:2015-04-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The contribution of methionine to the stability of the Escherichia coli MetNIQ ABC transporter-substrate binding protein complex.
Biol.Chem., 396, 2015
8B51
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BU of 8b51 by Molmil
Usutu virus methyltransferase domain in complex with sinefungin
Descriptor: GLYCEROL, GLYCINE, RNA-directed RNA polymerase NS5, ...
Authors:Ferrero, D.S, Albentosa Gonzalez, L, Mas, A, Verdaguer, N.
Deposit date:2022-09-21
Release date:2023-10-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structure and function of the NS5 methyltransferase domain from Usutu virus.
Antiviral Res., 208, 2022
8F2L
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BU of 8f2l by Molmil
Crystal structure of Mycobacterium tuberculosis Homoserine transacetylase in complex with L-Homoserine
Descriptor: Homoserine O-acetyltransferase, L-HOMOSERINE
Authors:Jayasinghe, Y.P, Ronning, D.R.
Deposit date:2022-11-08
Release date:2023-03-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural and Functional Characterization of Mycobacterium tuberculosis Homoserine Transacetylase.
Acs Infect Dis., 9, 2023
4A9V
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BU of 4a9v by Molmil
Pseudomonas fluorescens PhoX
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Yong, S.C, Roversi, P, Lillington, J.E.D, Zeldin, O.B, Garman, E.F, Lea, S.M, Berks, B.C.
Deposit date:2011-11-28
Release date:2012-12-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:A Complex Iron-Calcium Cofactor Catalyzing Phosphotransfer Chemistry
Science, 345, 2014
8B52
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BU of 8b52 by Molmil
Usutu virus methyltransferase domain in complex with sinefungin
Descriptor: GLYCEROL, Genome polyprotein, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Ferrero, D.S, Albentosa Gonzalez, L, Mas, A, Verdaguer, N.
Deposit date:2022-09-21
Release date:2023-10-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure and function of the NS5 methyltransferase domain from Usutu virus.
Antiviral Res., 208, 2022
6N6K
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BU of 6n6k by Molmil
Human REXO2 bound to pAG
Descriptor: MALONATE ION, RNA (5'-R(P*AP*G)-3'), RNA exonuclease 2 homolog,Small fragment nuclease, ...
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2018-11-26
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.418 Å)
Cite:A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
Elife, 8, 2019
5IT3
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BU of 5it3 by Molmil
Swirm domain of human Lsd1
Descriptor: Lysine-specific histone demethylase 1A, MAGNESIUM ION
Authors:Jeffrey, P.D, Yuan, P.
Deposit date:2016-03-16
Release date:2016-05-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A Tlx-interacting peptide of Lsd1 inhibits the proliferation of brain tumor stem cells
To Be Published
8H0N
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BU of 8h0n by Molmil
Crystal structure of the human METTL1-WDR4 complex
Descriptor: tRNA (guanine-N(7)-)-methyltransferase, tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4
Authors:Jin, X.H, Guan, Z.Y, Gong, Z, Zhang, D.L.
Deposit date:2022-09-30
Release date:2023-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insight into how WDR4 promotes the tRNA N7-methylguanosine methyltransferase activity of METTL1.
Cell Discov, 9, 2023
8P3Q
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BU of 8p3q by Molmil
Homomeric GluA2 flip R/G-unedited Q/R-edited F231A mutant in tandem with TARP gamma-2, desensitized conformation 3
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Glutamate receptor 2, ...
Authors:Zhang, D, Krieger, J.M, Yamashita, K, Greger, I.
Deposit date:2023-05-18
Release date:2023-08-30
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structural mobility tunes signalling of the GluA1 AMPA glutamate receptor.
Nature, 621, 2023
6MNC
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BU of 6mnc by Molmil
CRYSTAL STRUCTURE OF HUMAN 17BETA-HYDROXYSTEROID DEHYDROGENASE TYPE 1 COMPLEXED WITH ESTRONE
Descriptor: (9beta,13alpha)-3-hydroxyestra-1,3,5(10)-trien-17-one, DI(HYDROXYETHYL)ETHER, Estradiol 17-beta-dehydrogenase 1
Authors:Li, T, Stephen, P, Zhu, D.W, Lin, S.X.
Deposit date:2018-10-01
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of human 17 beta-hydroxysteroid dehydrogenase type 1 complexed with estrone and NADP+reveal the mechanism of substrate inhibition.
Febs J., 286, 2019
6J2M
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BU of 6j2m by Molmil
Crystal structure of AtFKBP53 C-terminal domain
Descriptor: 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN, CHLORIDE ION, Peptidyl-prolyl cis-trans isomerase FKBP53
Authors:Singh, A.K, Vasudevan, D.
Deposit date:2019-01-01
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:AtFKBP53: a chimeric histone chaperone with functional nucleoplasmin and PPIase domains.
Nucleic Acids Res., 48, 2020
8ENL
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BU of 8enl by Molmil
CryoEM structure of the high pH turnover-inactivated nitrogenase MoFe-protein
Descriptor: CHAPSO, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Warmack, R.A, Maggiolo, A.O, Rees, D.C.
Deposit date:2022-09-30
Release date:2023-03-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.37 Å)
Cite:Structural consequences of turnover-induced homocitrate loss in nitrogenase.
Nat Commun, 14, 2023
4Y6U
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BU of 4y6u by Molmil
Mycobacterial protein
Descriptor: 1,2-ETHANEDIOL, 3-PHOSPHOGLYCERIC ACID, CHLORIDE ION, ...
Authors:Albesa-Jove, D, Rodrigo-Unzueta, A, Cifuente, J.O, Urresti, S, Comino, N, Sancho-Vaello, E, Guerin, M.E.
Deposit date:2015-02-13
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.271 Å)
Cite:A Native Ternary Complex Trapped in a Crystal Reveals the Catalytic Mechanism of a Retaining Glycosyltransferase.
Angew.Chem.Int.Ed.Engl., 54, 2015
8ENN
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BU of 8enn by Molmil
Homocitrate-deficient nitrogenase MoFe-protein from Azotobacter vinelandii nifV knockout
Descriptor: CHAPSO, CITRIC ACID, FE (III) ION, ...
Authors:Warmack, R.A, Maggiolo, A.O, Rees, D.C.
Deposit date:2022-09-30
Release date:2023-03-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Structural consequences of turnover-induced homocitrate loss in nitrogenase.
Nat Commun, 14, 2023
8ENM
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BU of 8enm by Molmil
CryoEM structure of the high pH nitrogenase MoFe-protein under non-turnover conditions
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Warmack, R.A, Maggiolo, A.O, Rees, D.C.
Deposit date:2022-09-30
Release date:2023-03-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.14 Å)
Cite:Structural consequences of turnover-induced homocitrate loss in nitrogenase.
Nat Commun, 14, 2023
8BLP
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BU of 8blp by Molmil
Human Urea Transporter UT-B/UT1 in Complex with Inhibitor UTBinh-14
Descriptor: 10-(4-ethylphenyl)sulfonyl-~{N}-(thiophen-2-ylmethyl)-5-thia-1,8,11,12-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-2(6),3,7,9,11-pentaen-7-amine, CHOLESTEROL HEMISUCCINATE, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Chi, G, Dietz, L, Pike, A.C.W, Maclean, E.M, Mukhopadhyay, S.M.M, Bohstedt, T, Wang, D, Scacioc, A, McKinley, G, Arrowsmith, C.H, Edwards, A, Bountra, C, Fernandez-Cid, A, Burgess-Brown, N.A, Duerr, K.L.
Deposit date:2022-11-10
Release date:2023-10-04
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural characterization of human urea transporters UT-A and UT-B and their inhibition.
Sci Adv, 9, 2023
8ENO
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BU of 8eno by Molmil
Homocitrate-deficient nitrogenase MoFe-protein from A. vinelandii nifV knockout in complex with NafT
Descriptor: CHAPSO, CITRIC ACID, FE (III) ION, ...
Authors:Warmack, R.A, Maggiolo, A.O, Rees, D.C.
Deposit date:2022-09-30
Release date:2023-03-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Structural consequences of turnover-induced homocitrate loss in nitrogenase.
Nat Commun, 14, 2023
6MSX
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BU of 6msx by Molmil
Iron containing ferritin at 1.43A
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Blackburn, A, Partowmah, S.H, Brennan, H.M, Mestizo, K.E, Stivala, C.D, Petreczky, J, Perez, A, Horn, A, McSweeney, S.
Deposit date:2018-10-18
Release date:2018-12-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:A simple technique to improve microcrystals using gel exclusion of nucleation inducing elements
To Be Published
5JL9
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BU of 5jl9 by Molmil
HUMAN PLACENTAL AROMATASE CYTOCHROME P450 (CYP19A1): ANDROSTENEDIONE COMPLEX #4
Descriptor: 4-ANDROSTENE-3-17-DIONE, Aromatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ghosh, D, Lo, J, Egbuta, C.
Deposit date:2016-04-26
Release date:2017-04-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Testosterone complex and non-steroidal ligands of human aromatase.
J. Steroid Biochem. Mol. Biol., 2018
6YRZ
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BU of 6yrz by Molmil
Crystal structure of FAP et pH 8.5 after illumination at 150K
Descriptor: CARBON DIOXIDE, FLAVIN-ADENINE DINUCLEOTIDE, Fatty acid photodecarboxylase, ...
Authors:Sorigue, D, Legrand, P, Blangy, S, Beisson, F, Arnoux, P.
Deposit date:2020-04-20
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.824 Å)
Cite:Mechanism and dynamics of fatty acid photodecarboxylase.
Science, 372, 2021

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數據於2024-11-13公開中

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