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PDB: 53012 results

7B4I
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BU of 7b4i by Molmil
Thermostable omega transaminase PjTA-R6 variant W58G engineered for asymmetric synthesis of enantiopure bulky amines
Descriptor: Aspartate aminotransferase family protein, PYRIDOXAL-5'-PHOSPHATE, SUCCINIC ACID
Authors:Capra, N, Rozeboom, H.J, Thunnissen, A.M.W.H, Janssen, D.B.
Deposit date:2020-12-02
Release date:2021-09-01
Last modified:2021-09-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Computational Redesign of an omega-Transaminase from Pseudomonas jessenii for Asymmetric Synthesis of Enantiopure Bulky Amines.
Acs Catalysis, 11, 2021
5MOE
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BU of 5moe by Molmil
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, Casein kinase II subunit alpha, ...
Authors:Brear, P, De Fusco, C, Georgiou, K, Iegre, J, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2016-12-14
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066.
Bioorg. Med. Chem., 25, 2017
6UVX
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BU of 6uvx by Molmil
The crystal structure of FbiA from Mycobacterium Smegmatis, Apo state
Descriptor: CALCIUM ION, Phosphoenolpyruvate transferase
Authors:Grinter, R, Gillett, D, Cordero, P.R.F, Greening, C.
Deposit date:2019-11-04
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cellular and Structural Basis of Synthesis of the Unique Intermediate Dehydro-F420-0 in Mycobacteria.
mSystems, 5, 2020
4XVZ
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BU of 4xvz by Molmil
MycF mycinamicin III 3'-O-methyltransferase in complex with Mg
Descriptor: CHLORIDE ION, MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase
Authors:Akey, D.L, Smith, J.L.
Deposit date:2015-01-28
Release date:2015-03-04
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
5K1A
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BU of 5k1a by Molmil
Crystal structure of the UAF1-USP12 complex in C2 space group
Descriptor: Ubiquitin carboxyl-terminal hydrolase 12, WD repeat-containing protein 48, ZINC ION
Authors:Li, H, D'Andrea, A.D, Zheng, N.
Deposit date:2016-05-18
Release date:2016-07-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20.
Mol.Cell, 63, 2016
7Q5V
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BU of 7q5v by Molmil
HIF PROLYL HYDROXYLASE 2 (PHD2/EGLN1) IN COMPLEX WITH N-OXALYLGLYCINE (NOG) AND HIF-2 ALPHA CODD (523-542)
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Egl nine homolog 1, ...
Authors:Figg Jr, W.D, McDonough, M.A, Chowdhury, R, Nakashima, Y, Schofield, C.J.
Deposit date:2021-11-04
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural basis for binding of the renal carcinoma target hypoxia-inducible factor 2 alpha to prolyl hydroxylase domain 2.
Proteins, 91, 2023
3IDX
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BU of 3idx by Molmil
Crystal structure of HIV-gp120 core in complex with CD4-binding site antibody b13, space group C222
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Fab b13 heavy chain, ...
Authors:Chen, L, Kwon, Y.D, Zhou, T, Wu, X, O'Dell, S, Cavacini, L, Hessell, A.J, Pancera, M, Tang, M, Xu, L, Yang, Z.Y, Zhang, M.Y, Arthos, J, Burton, D.R, Dimitrov, D.S, Nabel, G.J, Posner, M, Sodroski, J, Wyatt, R, Mascola, J.R, Kwong, P.D.
Deposit date:2009-07-22
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of immune evasion at the site of CD4 attachment on HIV-1 gp120.
Science, 326, 2009
5MT2
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BU of 5mt2 by Molmil
Glycoside hydrolase BT_0996
Descriptor: Beta-galactosidase, GLYCEROL
Authors:Basle, A, Ndeh, D, Rogowski, A, Cartmell, A, Luis, A.S, Venditto, I, Labourel, A, Gilbert, H.J.
Deposit date:2017-01-06
Release date:2017-03-22
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Complex pectin metabolism by gut bacteria reveals novel catalytic functions.
Nature, 544, 2017
5K8Z
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BU of 5k8z by Molmil
Crystal structure of dimeric chlorite dismutase from Cyanothece sp. PCC7425 (pH 8.5)
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Chlorite dismutase, ...
Authors:Puehringer, D, Schaffner, I, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-05-31
Release date:2017-06-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies.
ACS Catal, 7, 2017
6YEY
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BU of 6yey by Molmil
Xenorhabdus nematophila XptA1 in complex with porcine mucosa heparin
Descriptor: A component of insecticidal toxin complex (Tc)
Authors:Roderer, D, Broecker, F, Sitsel, O, Kaplonek, P, Leidreiter, F, Seeberger, P.H, Raunser, S.
Deposit date:2020-03-25
Release date:2020-07-08
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Glycan-dependent cell adhesion mechanism of Tc toxins.
Nat Commun, 11, 2020
6SF6
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BU of 6sf6 by Molmil
Crystal structure of the mAb 15A in complex with COMP-epitope P6
Descriptor: COMP-reactive monoclonal antibody 15A Fab fragment, heavy chain, light chain, ...
Authors:Dobritzsch, D, Ge, C, Holmdahl, R.
Deposit date:2019-08-01
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Antibodies to cartilage oligomeric matrix protein in vivo are pathogenic and clinically relevant in rheumatoid arthritis
To Be Published
6V6O
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BU of 6v6o by Molmil
EGFR(T790M/V948R) in complex with LN2380
Descriptor: CHLORIDE ION, Epidermal growth factor receptor, N-[3-({4-[4-(4-fluorophenyl)-2-(3-hydroxypropyl)-1H-imidazol-5-yl]pyridin-2-yl}amino)-4-methoxyphenyl]propanamide
Authors:Heppner, D.E, Eck, M.J.
Deposit date:2019-12-05
Release date:2020-04-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for EGFR Mutant Inhibition by Trisubstituted Imidazole Inhibitors.
J.Med.Chem., 63, 2020
7UOG
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BU of 7uog by Molmil
Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and asymmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence.
Descriptor: DNA (5'-D(AP*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*AP*CP*CP*CP*GP*CP*CP*TP*T)-3', DNA (5'-D(GP*TP*AP*AP*GP*GP*CP*GP*GP*GP*TP*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*G)-3', MAGNESIUM ION, ...
Authors:Ward, A.R, Snow, C.D.
Deposit date:2022-04-12
Release date:2023-04-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds.
Acs Nano, 17, 2023
7UR0
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BU of 7ur0 by Molmil
Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and scaffold-insert duplexes (21mer and 10mer) containing the cognate REPE54 sequence and an additional T-A rich sequence, respectively.
Descriptor: DNA (5'-D(*AP*AP*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*A)-3'), DNA (5'-D(A*GP*AP*CP*GP*GP*TP*AP*AP*TP*T)-3'), DNA (5'-D(A*GP*TP*AP*AP*TP*TP*AP*CP*CP*G)-3'), ...
Authors:Orun, A.R, Snow, C.D.
Deposit date:2022-04-20
Release date:2023-04-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds.
Acs Nano, 17, 2023
6EZG
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BU of 6ezg by Molmil
Torpedo californica AChE in complex with indolic multi-target directed ligand
Descriptor: 1-(7-chloranyl-4-methoxy-1~{H}-indol-5-yl)-3-[1-(phenylmethyl)piperidin-4-yl]propan-1-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, ...
Authors:Santoni, G, Lalut, J, Karila, D, Lecoutey, C, Davis, A, Nachon, F, Sillman, I, Sussman, J, Weik, M, Maurice, T, Dallemagne, P, Rochais, C.
Deposit date:2017-11-15
Release date:2018-11-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Novel multitarget-directed ligands targeting acetylcholinesterase and sigma1receptors as lead compounds for treatment of Alzheimer's disease: Synthesis, evaluation, and structural characterization of their complexes with acetylcholinesterase.
Eur J Med Chem, 162, 2018
6F0J
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BU of 6f0j by Molmil
GLIC mutant E26A
Descriptor: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
Authors:Hu, H.D, Delarue, M.
Deposit date:2017-11-20
Release date:2018-01-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Full mutational mapping of titratable residues helps to identify proton-sensors involved in the control of channel gating in the Gloeobacter violaceus pentameric ligand-gated ion channel.
PLoS Biol., 15, 2017
6MUU
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BU of 6muu by Molmil
Cryo-EM structure of Csm-crRNA binary complex in type III-A CRISPR-Cas system
Descriptor: RNA (25-MER), Uncharacterized protein Csm1, Uncharacterized protein Csm2, ...
Authors:Jia, N, Wang, C, Eng, E.T, Patel, D.J.
Deposit date:2018-10-23
Release date:2018-12-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
Mol. Cell, 73, 2019
5MY3
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BU of 5my3 by Molmil
Crystal structure of the RhoGAP domain of Rgd1p at 2.19 Angstroms resolution
Descriptor: RHO GTPase-activating protein RGD1
Authors:Martinez, D.M, d'Estaintot, B.L, Granier, T, Hugues, M, Odaert, B, Gallois, B, Doignon, F.
Deposit date:2017-01-25
Release date:2018-01-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural evidence of a phosphoinositide-binding site in the Rgd1-RhoGAP domain.
Biochem. J., 474, 2017
7NR2
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BU of 7nr2 by Molmil
The structure of the SBP TarP_Sse in complex with coumarate
Descriptor: 4'-HYDROXYCINNAMIC ACID, SULFATE ION, TRAP dicarboxylate transporter, ...
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-02
Release date:2021-10-06
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NRA
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BU of 7nra by Molmil
The structure of the SBP TarP_Sse in complex with cinnamate
Descriptor: HYDROCINNAMIC ACID, TRAP dicarboxylate transporter, DctP subunit
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-03
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NRR
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BU of 7nrr by Molmil
The structure of the SBP TarP_Csal in complex with caffeate
Descriptor: CAFFEIC ACID, MAGNESIUM ION, TRAP dicarboxylate transporter-DctP subunit
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-04
Release date:2021-10-06
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
6BGT
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BU of 6bgt by Molmil
Structure of Trastuzumab Fab mutant in complex with Her2 extracellular domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Herceptin heavy chain Fab fragment mutant, Herceptin light chain mutant, ...
Authors:Christie, M, Christ, D.
Deposit date:2017-10-29
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Stable human IgG antibody therapeutics with native framework structure
To Be Published
7NSW
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BU of 7nsw by Molmil
The structure of the SBP TarP_Csal in complex with coumarate
Descriptor: 1,2-ETHANEDIOL, 4'-HYDROXYCINNAMIC ACID, MAGNESIUM ION, ...
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-08
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7AUG
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BU of 7aug by Molmil
Crystal structure of rsGCamP1.3 in the ON state
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, FORMIC ACID, ...
Authors:Janowski, R, Fuenzalida-Werner, J.P, Mishra, K, Stiel, A.C, Niessing, D.
Deposit date:2020-11-03
Release date:2021-10-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Genetically encoded photo-switchable molecular sensors for optoacoustic and super-resolution imaging.
Nat.Biotechnol., 40, 2022
6VER
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BU of 6ver by Molmil
Human insulin analog: [GluB10,TyrB20]-DOI
Descriptor: Insulin A chain, Insulin B chain
Authors:Menting, J.G, Chou, D.H.-C, Lawrence, M.C, Xiong, X.
Deposit date:2020-01-02
Release date:2020-11-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.047 Å)
Cite:Mini-Ins: A minimal, bioactive insulin analog with alternative binding modes
not published

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數據於2024-07-31公開中

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