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PDB: 53878 results

6EI8
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BU of 6ei8 by Molmil
Crystal structure of human tRNA-dihydrouridine (20) synthase dsRBD F359A mutant
Descriptor: SULFATE ION, tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
Authors:Bou-Nader, C, Pecqueur, L, Hamdane, D.
Deposit date:2017-09-18
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Conformational Stability Adaptation of a Double-Stranded RNA-Binding Domain to Transfer RNA Ligand.
Biochemistry, 58, 2019
6A8N
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BU of 6a8n by Molmil
The crystal structure of muPAin-1-IG-2 in complex with muPA-SPD at pH8.5
Descriptor: CYS-PRO-ALA-TYR-SER-ARG-TYR-ILE-GLY-CYS, Urokinase-type plasminogen activator B
Authors:Wang, D, Yang, Y.S, Jiang, L.G, Huang, M.D, Li, J.Y, Andreasen, P.A, Xu, P, Chen, Z.
Deposit date:2018-07-09
Release date:2019-02-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.489 Å)
Cite:Suppression of Tumor Growth and Metastases by Targeted Intervention in Urokinase Activity with Cyclic Peptides.
J.Med.Chem., 62, 2019
3EPD
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BU of 3epd by Molmil
CryoEM structure of poliovirus receptor bound to poliovirus type 3
Descriptor: MYRISTIC ACID, Poliovirus Type3 peptide, Poliovirus receptor, ...
Authors:Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G.
Deposit date:2008-09-29
Release date:2008-11-11
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses.
Proc.Natl.Acad.Sci.USA, 105, 2008
3EPC
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BU of 3epc by Molmil
CryoEM structure of poliovirus receptor bound to poliovirus type 1
Descriptor: MYRISTIC ACID, Poliovirus receptor, Protein VP1, ...
Authors:Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G.
Deposit date:2008-09-29
Release date:2008-11-11
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses.
Proc.Natl.Acad.Sci.USA, 105, 2008
3EPF
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BU of 3epf by Molmil
CryoEM structure of poliovirus receptor bound to poliovirus type 2
Descriptor: 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE, MYRISTIC ACID, Poliovirus receptor, ...
Authors:Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G.
Deposit date:2008-09-29
Release date:2008-11-11
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses.
Proc.Natl.Acad.Sci.USA, 105, 2008
7MF7
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BU of 7mf7 by Molmil
Crystal structure of antibody 10E8v4-P100gA Fab
Descriptor: Antibody 10E8v4 Fab heavy chain, Antibody 10E8v4 Fab light chain
Authors:Kwon, Y.D, Kwong, P.D.
Deposit date:2021-04-08
Release date:2021-07-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of HIV-1 Neutralizing Antibody 10E8 Delineate the Mechanistic Basis of Its Multi-Peak Behavior on Size-Exclusion Chromatography.
Antibodies, 10, 2021
5LU2
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BU of 5lu2 by Molmil
Human 14-3-3 sigma complexed with long HSPB6 phosphopeptide
Descriptor: 14-3-3 protein sigma, Heat shock protein beta-6
Authors:Sluchanko, N.N, Beelen, S, Kulikova, A.A, Weeks, S.D, Antson, A.A, Gusev, N.B, Strelkov, S.V.
Deposit date:2016-09-07
Release date:2017-02-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for the Interaction of a Human Small Heat Shock Protein with the 14-3-3 Universal Signaling Regulator.
Structure, 25, 2017
8ADW
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BU of 8adw by Molmil
Lipidic alpha-synuclein fibril - polymorph L1C
Descriptor: Alpha-synuclein
Authors:Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
Deposit date:2022-07-11
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
1CZH
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BU of 1czh by Molmil
COMPARISONS OF WILD TYPE AND MUTANT FLAVODOXINS FROM ANACYSTIS NIDULANS. STRUCTURAL DETERMINANTS OF THE REDOX POTENTIALS.
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN, GLYCEROL, ...
Authors:Hoover, D.M, Drennan, C.L, Metzger, A.L, Osborne, C, Weber, C.H, Pattridge, K.A, Ludwig, M.L.
Deposit date:1999-09-03
Release date:1999-12-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Comparisons of wild-type and mutant flavodoxins from Anacystis nidulans. Structural determinants of the redox potentials.
J.Mol.Biol., 294, 1999
7TRK
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BU of 7trk by Molmil
Human M4 muscarinic acetylcholine receptor complex with Gi1 and the agonist iperoxo
Descriptor: 4-(4,5-dihydro-1,2-oxazol-3-yloxy)-N,N,N-trimethylbut-2-yn-1-aminium, Antibody fragment scFv16, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Vuckovic, Z, Mobbs, J.I, Belousoff, M.J, Glukhova, A, Sexton, P.M, Danev, R, Thal, D.M.
Deposit date:2022-01-29
Release date:2023-05-17
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural and dynamic mechanisms of allostery at the M4 muscarinic acetylcholine receptor
Elife, 2023
7TRP
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BU of 7trp by Molmil
Human M4 muscarinic acetylcholine receptor complex with Gi1 and the agonist iperoxo and positive allosteric modulator LY2033298
Descriptor: 3-amino-5-chloro-N-cyclopropyl-6-methoxy-4-methylthieno[2,3-b]pyridine-2-carboxamide, 4-(4,5-dihydro-1,2-oxazol-3-yloxy)-N,N,N-trimethylbut-2-yn-1-aminium, Antibody fragment scFv16, ...
Authors:Vuckovic, Z, Mobbs, J.I, Belousoff, M.J, Glukhova, A, Sexton, P.M, Danev, R, Thal, D.M.
Deposit date:2022-01-30
Release date:2023-05-17
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structural and dynamic mechanisms of allostery at the M4 muscarinic acetylcholine receptor
Elife, 2023
3IVY
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BU of 3ivy by Molmil
Crystal structure of Mycobacterium tuberculosis cytochrome P450 CYP125, p212121 crystal form
Descriptor: Cytochrome P450 CYP125, PROTOPORPHYRIN IX CONTAINING FE
Authors:McLean, K.J, Levy, C, Munro, A.W, Leys, D.
Deposit date:2009-09-02
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.352 Å)
Cite:The Structure of Mycobacterium tuberculosis CYP125: molecular basis for cholesterol binding in a P450 needed for host infection.
J.Biol.Chem., 284, 2009
1CRG
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BU of 1crg by Molmil
THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Berghuis, A.M, Brayer, G.D.
Deposit date:1993-08-06
Release date:1994-01-31
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:The role of a conserved internal water molecule and its associated hydrogen bond network in cytochrome c.
J.Mol.Biol., 236, 1994
7TRQ
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BU of 7trq by Molmil
Human M4 muscarinic acetylcholine receptor complex with Gi1 and the agonist iperoxo and positive allosteric modulator VU0467154
Descriptor: 4-(4,5-dihydro-1,2-oxazol-3-yloxy)-N,N,N-trimethylbut-2-yn-1-aminium, 5-amino-3,4-dimethyl-N-{[4-(trifluoromethanesulfonyl)phenyl]methyl}thieno[2,3-c]pyridazine-6-carboxamide, Antibody fragment scFv16, ...
Authors:Vuckovic, Z, Mobbs, J.I, Belousoff, M.J, Glukhova, A, Sexton, P.M, Danev, R, Thal, D.M.
Deposit date:2022-01-30
Release date:2023-05-17
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural and dynamic mechanisms of allostery at the M4 muscarinic acetylcholine receptor
Elife, 2023
7TRS
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BU of 7trs by Molmil
Human M4 muscarinic acetylcholine receptor complex with Gi1 and the endogenous agonist acetylcholine
Descriptor: ACETYLCHOLINE, Antibody fragment scFv16, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Vuckovic, Z, Mobbs, J.I, Belousoff, M.J, Glukhova, A, Sexton, P.M, Danev, R, Thal, D.M.
Deposit date:2022-01-30
Release date:2023-05-17
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural and dynamic mechanisms of allostery at the M4 muscarinic acetylcholine receptor
Elife, 2023
6RVV
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BU of 6rvv by Molmil
Structure of left-handed protein cage consisting of 24 eleven-membered ring proteins held together by gold (I) bridges.
Descriptor: GOLD ION, Transcription attenuation protein MtrB
Authors:Malay, A.D, Miyazaki, N, Biela, A.P, Iwasaki, K, Heddle, J.G.
Deposit date:2019-06-03
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:An ultra-stable gold-coordinated protein cage displaying reversible assembly.
Nature, 569, 2019
8WP1
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BU of 8wp1 by Molmil
Cryo-EM structure of SUCR1 in complex with cis-epoxysuccinic acid and Gi proteins
Descriptor: (2R,3S)-oxirane-2,3-dicarboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Liu, A, Ye, R.D.
Deposit date:2023-10-08
Release date:2024-09-11
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural insights into ligand recognition and activation of the succinate receptor SUCNR1.
Cell Rep, 43, 2024
3EXT
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BU of 3ext by Molmil
Crystal structure of KGPDC from Streptococcus mutans
Descriptor: MAGNESIUM ION, RmpD (Hexulose-6-phosphate synthase)
Authors:Liu, X, Li, G.L, Li, L.F, Su, X.D.
Deposit date:2008-10-17
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Open-closed conformational change revealed by the crystal structures of 3-keto-L-gulonate 6-phosphate decarboxylase from Streptococcus mutans
Biochem.Biophys.Res.Commun., 381, 2009
6AIN
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BU of 6ain by Molmil
Crystal structure of p-nitrophenol 4-monooxygenase PnpA from Pseudomonas putida DLL-E4
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PnpA
Authors:Chen, Q.Z, Huang, Y, Duan, Y.J, Li, Z.K, Liu, W.D, Cui, Z.L.
Deposit date:2018-08-24
Release date:2018-10-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal structure of p-nitrophenol 4-monooxygenase PnpA from Pseudomonas putida DLL-E4: The key enzyme involved in p-nitrophenol degradation.
Biochem. Biophys. Res. Commun., 504, 2018
4I5H
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BU of 4i5h by Molmil
Crystal Structure of a Double Mutant Rat Erk2 Complexed With a Type II Quinazoline Inhibitor
Descriptor: Mitogen-activated protein kinase 1, N-{3-[2-(cyclopropylamino)quinazolin-6-yl]-4-methylphenyl}-3-(trifluoromethyl)benzamide
Authors:Hari, S.B, Maly, D.J, Merritt, E.A.
Deposit date:2012-11-28
Release date:2013-07-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Sequence determinants of a specific inactive protein kinase conformation.
Chem.Biol., 20, 2013
5XW2
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BU of 5xw2 by Molmil
Crystal structure of the Hydroxylase HmtN in C 1 2 1 crystal form
Descriptor: Cytochrome P450 107B1 (P450CVIIB1), GLYCEROL, MAGNESIUM ION, ...
Authors:Zhang, H.D, Zhang, H.J.
Deposit date:2017-06-29
Release date:2018-04-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.298 Å)
Cite:Molecular characterization of the hydroxylase HmtN at 1.3 angstrom resolution.
Biochem. Biophys. Res. Commun., 2017
1CZO
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BU of 1czo by Molmil
COMPARISONS OF WILD TYPE AND MUTANT FLAVODOXINS FROM ANACYSTIS NIDULANS. STRUCTURAL DETERMINANTS OF THE REDOX POTENTIALS.
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN, SULFATE ION
Authors:Hoover, D.M, Drennan, C.L, Metzger, A.L, Osborne, C, Weber, C.H, Pattridge, K.A, Ludwig, M.L.
Deposit date:1999-09-03
Release date:1999-12-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Comparisons of wild-type and mutant flavodoxins from Anacystis nidulans. Structural determinants of the redox potentials.
J.Mol.Biol., 294, 1999
6AK5
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BU of 6ak5 by Molmil
Binary Complex of Human DNA Polymerase Mu with MnGTP
Descriptor: DNA-directed DNA/RNA polymerase mu, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Chang, Y.K, Wu, W.J, Tsai, M.D.
Deposit date:2018-08-30
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions.
J.Am.Chem.Soc., 141, 2019
5G15
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BU of 5g15 by Molmil
Structure Aurora A (122-403) bound to activating monobody Mb1 and AMPPCP
Descriptor: AURORA A KINASE, MAGNESIUM ION, MB1 MONOBODY, ...
Authors:Zorba, A, Kutter, S, Kern, D, Koide, S, Koide, A.
Deposit date:2016-03-23
Release date:2018-03-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Allosteric modulation of a human protein kinase with monobodies.
Proc.Natl.Acad.Sci.USA, 116, 2019
8WVG
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BU of 8wvg by Molmil
Transporter bound with inhibitor
Descriptor: (3~{S},11~{b}~{R})-9,10-dimethoxy-3-(2-methylpropyl)-1,3,4,6,7,11~{b}-hexahydrobenzo[a]quinolizin-2-one, FabH, FabL, ...
Authors:Im, D, Iwata, S.
Deposit date:2023-10-23
Release date:2024-09-25
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Neurotransmitter recognition by human vesicular monoamine transporter 2.
Nat Commun, 15, 2024

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数据于2024-11-13公开中

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