Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 53266 results

8A3L
DownloadVisualize
BU of 8a3l by Molmil
Structural insights into the binding of bS1 to the ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
Authors:D'Urso, G, Chat, S, Gillet, R, Giudice, E.
Deposit date:2022-06-08
Release date:2023-05-10
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Structural insights into the binding of bS1 to the ribosome.
Nucleic Acids Res., 51, 2023
5KGQ
DownloadVisualize
BU of 5kgq by Molmil
NMR structure and dynamics of Q4DY78, a conserved kinetoplasid-specific protein from Trypanosoma cruzi
Descriptor: Uncharacterized protein
Authors:D'Andrea, E.D, Retel, J.S, Diehl, A, Schmieder, P, Oschkinat, H, Pires, J.R.
Deposit date:2016-06-13
Release date:2017-07-05
Last modified:2024-06-12
Method:SOLUTION NMR
Cite:NMR structure and dynamics of Q4DY78, a conserved kinetoplasid-specific protein from Trypanosoma cruzi.
J.Struct.Biol., 213, 2021
1XCV
DownloadVisualize
BU of 1xcv by Molmil
Crystal Structure Of (H79AC102D)Dtxr complexed with Nickel(II)
Descriptor: Diphtheria toxin repressor mutant, NICKEL (II) ION
Authors:D'aquino, J.A, Ringe, D.
Deposit date:2004-09-03
Release date:2005-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of metal ion activation of the diphtheria toxin repressor DtxR.
Proc.Natl.Acad.Sci.USA, 102, 2005
4QY3
DownloadVisualize
BU of 4qy3 by Molmil
THE CRYSTAL STRUCTURE OF THE COMPLEX of HCAII WITH AN ORTHO-SUBSTITUTED BENZOIC ACID
Descriptor: 2-[(S)-benzylsulfinyl]benzoic acid, 4-(HYDROXYMERCURY)BENZOIC ACID, Carbonic anhydrase 2, ...
Authors:D'Ambrosio, K, De Simone, G.
Deposit date:2014-07-23
Release date:2014-12-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Out of the active site binding pocket for carbonic anhydrase inhibitors.
Chem.Commun.(Camb.), 51, 2014
4G09
DownloadVisualize
BU of 4g09 by Molmil
The crystal structure of the C366S mutant of HDH from Brucella suis in complex with a substituted benzyl ketone
Descriptor: (3S)-3-amino-1-[4-(benzyloxy)phenyl]-4-(1H-imidazol-4-yl)butan-2-one, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:D'Ambrosio, K, De Simone, G.
Deposit date:2012-07-09
Release date:2013-10-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the rational design of new anti-Brucella agents: The crystal structure of the C366S mutant of l-histidinol dehydrogenase from Brucella suis.
Biochimie, 97, 2014
3KN6
DownloadVisualize
BU of 3kn6 by Molmil
Crystal structure of the C-terminal kinase domain of MSK1
Descriptor: Ribosomal protein S6 kinase alpha-5
Authors:D'Angelo, I, Malakhova, M, Dong, Z.
Deposit date:2009-11-12
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the active form of the C-terminal kinase domain of mitogen- and stress-activated protein kinase 1.
J.Mol.Biol., 399, 2010
2ZYQ
DownloadVisualize
BU of 2zyq by Molmil
Crystal structure of the HsaC extradiol dioxygenase from M. tuberculosis
Descriptor: D(-)-TARTARIC ACID, FE (II) ION, PROBABLE BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE BPHC
Authors:D'Angelo, I, Yam, K.C, Eltis, L.D, Strynadka, N.
Deposit date:2009-01-28
Release date:2009-03-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Studies of a ring-cleaving dioxygenase illuminate the role of cholesterol metabolism in the pathogenesis of Mycobacterium tuberculosis.
Plos Pathog., 5, 2009
4G07
DownloadVisualize
BU of 4g07 by Molmil
The crystal structure of the C366S mutant of HDH from Brucella suis
Descriptor: GLYCEROL, Histidinol dehydrogenase, ZINC ION
Authors:D'Ambrosio, K, De Simone, G.
Deposit date:2012-07-09
Release date:2013-09-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for the rational design of new anti-Brucella agents: The crystal structure of the C366S mutant of l-histidinol dehydrogenase from Brucella suis.
Biochimie, 97, 2014
3AFE
DownloadVisualize
BU of 3afe by Molmil
Crystal structure of the HsaA monooxygenase from M.tuberculosis
Descriptor: Hydroxylase, putative
Authors:D'Angelo, I, Lin, L.Y, Dresen, C, Tocheva, E.I, Eltis, L.D, Strynadka, N.
Deposit date:2010-02-28
Release date:2010-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A flavin-dependent monooxygenase from Mycobacterium tuberculosis involved in cholesterol catabolism
J.Biol.Chem., 285, 2010
5CLU
DownloadVisualize
BU of 5clu by Molmil
THE CRYSTAL STRUCTURE OF THE COMPLEX of HCAII WITH A SACCHARINE DERIVATIVE
Descriptor: (1,1-dioxido-3-oxo-1,2-benzothiazol-2(3H)-yl)acetic acid, Carbonic anhydrase 2, GLYCEROL, ...
Authors:D'Ambrosio, K, De Simone, G.
Deposit date:2015-07-16
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A Combined Crystallographic and Theoretical Study Explains the Capability of Carboxylic Acids to Adopt Multiple Binding Modes in the Active Site of Carbonic Anhydrases.
Chemistry, 22, 2016
4IU5
DownloadVisualize
BU of 4iu5 by Molmil
Crystal structure of Leishmania mexicana arginase in complex with catalytic product L-ornithine
Descriptor: Arginase, GLYCEROL, L-ornithine, ...
Authors:D'Antonio, E.L, Ullman, B, Roberts, S.C, Gaur Dixit, U, Wilson, M.E, Hai, Y, Christianson, D.W.
Deposit date:2013-01-19
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of arginase from Leishmania mexicana and implications for the inhibition of polyamine biosynthesis in parasitic infections.
Arch.Biochem.Biophys., 535, 2013
4IU0
DownloadVisualize
BU of 4iu0 by Molmil
Crystal structure of Leishmania mexicana arginase in complex with inhibitor ABH
Descriptor: 2(S)-AMINO-6-BORONOHEXANOIC ACID, Arginase, GLYCEROL, ...
Authors:D'Antonio, E.L, Ullman, B, Roberts, S.C, Gaur Dixit, U, Wilson, M.E, Hai, Y, Christianson, D.W.
Deposit date:2013-01-19
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of arginase from Leishmania mexicana and implications for the inhibition of polyamine biosynthesis in parasitic infections.
Arch.Biochem.Biophys., 535, 2013
5WG8
DownloadVisualize
BU of 5wg8 by Molmil
Structure of PP5C with LB-100; 7-oxabicyclo[2.2.1]heptane-2,3-dicarbonyl moiety modeled in the density
Descriptor: (1S,2R,3S,4R)-3-(4-methylpiperazine-1-carbonyl)-7-oxabicyclo[2.2.1]heptane-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:D'Arcy, B.M, Swingle, M.R, Honkanen, R.E, Prakash, A.
Deposit date:2017-07-13
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Antitumor Drug LB-100 Is a Catalytic Inhibitor of Protein Phosphatase 2A (PPP2CA) and 5 (PPP5C) Coordinating with the Active-Site Catalytic Metals in PPP5C.
Mol. Cancer Ther., 18, 2019
4ITY
DownloadVisualize
BU of 4ity by Molmil
Crystal structure of Leishmania mexicana arginase
Descriptor: Arginase, GLYCEROL, MANGANESE (II) ION
Authors:D'Antonio, E.L, Ullman, B, Roberts, S.C, Gaur Dixit, U, Wilson, M.E, Hai, Y, Christianson, D.W.
Deposit date:2013-01-19
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of arginase from Leishmania mexicana and implications for the inhibition of polyamine biosynthesis in parasitic infections.
Arch.Biochem.Biophys., 535, 2013
3EFJ
DownloadVisualize
BU of 3efj by Molmil
Structure of c-Met with pyrimidone inhibitor 7
Descriptor: 2-benzyl-5-{4-[(6,7-dimethoxyquinolin-4-yl)oxy]-3-fluorophenyl}-3-methylpyrimidin-4(3H)-one, Hepatocyte growth factor receptor
Authors:D'Angelo, N, Bellon, S, Whittington, D.
Deposit date:2008-09-09
Release date:2008-10-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design, synthesis, and biological evaluation of potent c-Met inhibitors.
J.Med.Chem., 51, 2008
4IU4
DownloadVisualize
BU of 4iu4 by Molmil
Crystal structure of Leishmania mexicana arginase in complex with inhibitor BEC
Descriptor: Arginase, BETA-MERCAPTOETHANOL, GLYCEROL, ...
Authors:D'Antonio, E.L, Ullman, B, Roberts, S.C, Gaur Dixit, U, Wilson, M.E, Hai, Y, Christianson, D.W.
Deposit date:2013-01-19
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of arginase from Leishmania mexicana and implications for the inhibition of polyamine biosynthesis in parasitic infections.
Arch.Biochem.Biophys., 535, 2013
4IU1
DownloadVisualize
BU of 4iu1 by Molmil
Crystal structure of Leishmania mexicana arginase in complex with inhibitor nor-NOHA
Descriptor: Arginase, GLYCEROL, MANGANESE (II) ION, ...
Authors:D'Antonio, E.L, Ullman, B, Roberts, S.C, Gaur Dixit, U, Wilson, M.E, Hai, Y, Christianson, D.W.
Deposit date:2013-01-19
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of arginase from Leishmania mexicana and implications for the inhibition of polyamine biosynthesis in parasitic infections.
Arch.Biochem.Biophys., 535, 2013
4GSZ
DownloadVisualize
BU of 4gsz by Molmil
Crystal Structure of the Zn2+5-Human Arginase I-ABH Complex
Descriptor: 2(S)-AMINO-6-BORONOHEXANOIC ACID, Arginase-1, ZINC ION
Authors:D'Antonio, E.L, Hai, Y, Christianson, D.W.
Deposit date:2012-08-28
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and function of non-native metal clusters in human arginase I.
Biochemistry, 51, 2012
3AFF
DownloadVisualize
BU of 3aff by Molmil
Crystal structure of the HsaA monooxygenase from M. tuberculosis
Descriptor: Hydroxylase, putative
Authors:D'Angelo, I, Lin, L.Y, Dresen, C, Tocheva, E.I, Strynadka, N, Eltis, L.D.
Deposit date:2010-02-28
Release date:2010-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:A flavin-dependent monooxygenase from Mycobacterium tuberculosis involved in cholesterol catabolism
J.Biol.Chem., 285, 2010
4GWC
DownloadVisualize
BU of 4gwc by Molmil
Crystal Structure of Mn2+2,Zn2+-Human Arginase I
Descriptor: Arginase-1, MANGANESE (II) ION, ZINC ION
Authors:D'Antonio, E.L, Hai, Y, Christianson, D.W.
Deposit date:2012-09-01
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of non-native metal clusters in human arginase I.
Biochemistry, 51, 2012
4GSM
DownloadVisualize
BU of 4gsm by Molmil
Crystal Structure of Ni2+2-Human Arginase I
Descriptor: Arginase-1, NICKEL (II) ION
Authors:D'Antonio, E.L, Hai, Y, Christianson, D.W.
Deposit date:2012-08-28
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and function of non-native metal clusters in human arginase I.
Biochemistry, 51, 2012
4GWD
DownloadVisualize
BU of 4gwd by Molmil
Crystal Structure of the Mn2+2,Zn2+-Human Arginase I-ABH Complex
Descriptor: 2(S)-AMINO-6-BORONOHEXANOIC ACID, Arginase-1, MANGANESE (II) ION, ...
Authors:D'Antonio, E.L, Hai, Y, Christianson, D.W.
Deposit date:2012-09-01
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structure and function of non-native metal clusters in human arginase I.
Biochemistry, 51, 2012
4GSV
DownloadVisualize
BU of 4gsv by Molmil
Crystal Structure of the Ni2+2-Human Arginase I-ABH complex
Descriptor: 2(S)-AMINO-6-BORONOHEXANOIC ACID, Arginase-1, NICKEL (II) ION
Authors:D'Antonio, E.L, Hai, Y, Christianson, D.W.
Deposit date:2012-08-28
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structure and function of non-native metal clusters in human arginase I.
Biochemistry, 51, 2012
2ZI8
DownloadVisualize
BU of 2zi8 by Molmil
Crystal structure of the HsaC extradiol dioxygenase from M. tuberculosis in complex with 3,4-dihydroxy-9,10-seconandrost-1,3,5(10)-triene-9,17-dione (DHSA)
Descriptor: 3,4-dihydroxy-9,10-secoandrosta-1(10),2,4-triene-9,17-dione, FE (II) ION, PROBABLE BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE BPHC
Authors:D'Angelo, I, Yam, K.C, Eltis, L.D, Strynadka, N.
Deposit date:2008-02-13
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Studies of a ring-cleaving dioxygenase illuminate the role of cholesterol metabolism in the pathogenesis of Mycobacterium tuberculosis.
Plos Pathog., 5, 2009
7MPZ
DownloadVisualize
BU of 7mpz by Molmil
HNH Nuclease Domain from G. stearothermophilus Cas9
Descriptor: CRISPR-associated endonuclease Cas9
Authors:D'Ordine, A.M, Belato, H.B, Lisi, G.P, Jogl, G.
Deposit date:2021-05-05
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural and dynamic insights into the HNH nuclease of divergent Cas9 species.
J.Struct.Biol., 214, 2021

224572

数据于2024-09-04公开中

PDB statisticsPDBj update infoContact PDBjnumon