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PDB: 53012 件

5DKN
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Crystal Structure of Calcium-loaded S100B bound to SBi4225
分子名称: 2,2'-[heptane-1,7-diylbis(oxybenzene-4,1-diyl)]bis(1H-imidazole), CALCIUM ION, Protein S100-B
著者Cavalier, M.C, Ansari, M.I, Pierce, A.D, Wilder, P.T, McKnight, L.E, Raman, E.P, Neau, D.B, Bezawada, P, Alasady, M.J, Varney, K.M, Toth, E.A, MacKerell Jr, A.D, Coop, A, Weber, D.J.
登録日2015-09-03
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.528 Å)
主引用文献Small Molecule Inhibitors of Ca(2+)-S100B Reveal Two Protein Conformations.
J.Med.Chem., 59, 2016
6FKF
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Chloroplast F1Fo conformation 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ...
著者Hahn, A, Vonck, J, Mills, D.J, Meier, T, Kuehlbrandt, W.
登録日2018-01-24
公開日2018-05-23
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure, mechanism, and regulation of the chloroplast ATP synthase.
Science, 360, 2018
5DLC
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X-ray Crystal Structure of a Pyridoxine 5-prime-phosphate synthase from Pseudomonas aeruginosa
分子名称: PHOSPHATE ION, Pyridoxine 5'-phosphate synthase
著者Fairman, J.W, Abendroth, J, Lorimer, D, Edwards, T.E, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2015-09-04
公開日2015-09-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献X-ray Crystal Structure of a Pyridoxine 5-prime-phosphate synthase from Pseudomonas aeruginosa
To Be Published
6CAE
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BU of 6cae by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Pantel, L, Florin, T, Dobosz-Bartoszek, M, Racine, E, Sarciaux, M, Serri, M, Houard, J, Campagne, J.M, Marcia de Figueiredo, R, Midrier, C, Gaudriault, S, Givaudan, A, Lanois, A, Forst, S, Aumelas, A, Cotteaux-Lautard, C, Bolla, J.M, Vingsbo Lundberg, C, Huseby, D, Hughes, D, Villain-Guillot, P, Mankin, A.S, Polikanov, Y.S, Gualtieri, M.
登録日2018-01-30
公開日2018-04-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Odilorhabdins, Antibacterial Agents that Cause Miscoding by Binding at a New Ribosomal Site.
Mol. Cell, 70, 2018
6SC5
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dAb3/HOIP-RBR-Ligand2
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase RNF31, SULFATE ION, ...
著者Tsai, Y.-C.I, Johansson, H, House, D, Rittinger, K.
登録日2019-07-23
公開日2019-11-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Single-Domain Antibodies as Crystallization Chaperones to Enable Structure-Based Inhibitor Development for RBR E3 Ubiquitin Ligases.
Cell Chem Biol, 27, 2020
2VLC
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Crystal structure of Natural Cinnamomin (Isoform III)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ribosome-inactivating protein, beta-D-mannopyranose, ...
著者Azzi, A, Wang, T, Zhu, D.-W, Zou, Y.-S, Liu, W.-Y, Lin, S.-X.
登録日2008-01-11
公開日2009-02-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal Structure of Native Cinnamomin Isoform III and its Comparison with Other Ribosome Inactivating Proteins.
Proteins: Struct., Funct., Bioinf., 74, 2009
6FD1
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7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII LOW TEMPERATURE, 1.35 A
分子名称: 7-FE FERREDOXIN I (FD1), FE3-S4 CLUSTER, IRON/SULFUR CLUSTER
著者Stout, C.D, Stura, E.A, Mcree, D.E.
登録日1997-09-17
公開日1997-11-12
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structure of Azotobacter vinelandii 7Fe ferredoxin at 1.35 A resolution and determination of the [Fe-S] bonds with 0.01 A accuracy.
J.Mol.Biol., 278, 1998
4WGG
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STRUCTURE OF THE TERNARY COMPLEX OF A ZINGIBER OFFICINALE DOUBLE BOND REDUCTASE IN COMPLEX WITH NADP AND CONIFERYL ALDEHYDE
分子名称: (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enal, Double Bond Reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Collery, J, Langlois d'Estaintot, B, Buratto, J, Granier, T, Gallois, B, Willis, M.A, Sang, Y, Flores-Sanchez, I.J, Gang, D.R.
登録日2014-09-18
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献STRUCTURE OF ZINGIBER OFFICINALE DOUBLE BOND REDUCTASE
to be published
3INL
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Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, ALDH2*2, complexed with agonist Alda-1
分子名称: 1,2-ETHANEDIOL, Aldehyde dehydrogenase, mitochondrial, ...
著者Perez-Miller, S, Hurley, T.D.
登録日2009-08-12
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.862 Å)
主引用文献Alda-1 is an agonist and chemical chaperone for the common human aldehyde dehydrogenase 2 variant.
Nat.Struct.Mol.Biol., 17, 2010
6YL3
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High resolution cryo-EM structure of urease from the pathogen Yersinia enterocolitica
分子名称: NICKEL (II) ION, Urease subunit alpha, Urease subunit beta, ...
著者Righetto, R.D, Anton, L, Adaixo, R, Jakob, R, Zivanov, J, Mahi, M.A, Ringler, P, Schwede, T, Maier, T, Stahlberg, H.
登録日2020-04-06
公開日2020-05-06
最終更新日2020-10-21
実験手法ELECTRON MICROSCOPY (1.98 Å)
主引用文献High-resolution cryo-EM structure of urease from the pathogen Yersinia enterocolitica.
Nat Commun, 11, 2020
8CMP
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DNA-binding bacterial histone protein HBB from Bdellovibrio bacteriovorus
分子名称: CBFD_NFYB_HMF domain-containing protein
著者Hu, Y, Joiner, J.D, Albrecht, R, Hartmann, M.D.
登録日2023-02-20
公開日2024-03-06
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Atomic resolution structure of a DNA-binding bacterial histone from Bdellovibrio bacteriovorus
To Be Published
7K23
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Murine polyomavirus hexavalent capsomer with 8A7H5 Fab, subparticle reconstruction
分子名称: 8A7H5 Fab heavy chain, 8A7H5 Fab light chain, Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
6YPR
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BU of 6ypr by Molmil
Human histidine triad nucleotide-binding protein 2 (hHINT2) refined to 1.26 A in H32 space group
分子名称: GLYCEROL, Histidine triad nucleotide-binding protein 2, mitochondrial
著者Dolot, R.D, Wlodarczyk, A, Bujacz, G.D, Nawrot, B.C.
登録日2020-04-16
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Biochemical, crystallographic and biophysical characterization of histidine triad nucleotide-binding protein 2 with different ligands including a non-hydrolyzable analog of Ap4A.
Biochim Biophys Acta Gen Subj, 1865, 2021
6YQU
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CRYSTAL STRUCTURE OF HUMAN CA II IN COMPLEX WITH 2-MERCAPTOBENZOXAZOLE
分子名称: 3~{H}-1,3-benzoxazole-2-thione, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
著者Alterio, V, De Simone, G, Esposito, D.
登録日2020-04-18
公開日2020-07-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.478 Å)
主引用文献2-Mercaptobenzoxazoles: a class of carbonic anhydrase inhibitors with a novel binding mode to the enzyme active site.
Chem.Commun.(Camb.), 56, 2020
6SGA
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BU of 6sga by Molmil
Body domain of the mt-SSU assemblosome from Trypanosoma brucei
分子名称: 9S rRNA, MAGNESIUM ION, PHOSPHATE ION, ...
著者Saurer, M, Ramrath, D.J.F, Niemann, M, Calderaro, S, Prange, C, Mattei, S, Scaiola, A, Leitner, A, Bieri, P, Horn, E.K, Leibundgut, M, Boehringer, D, Schneider, A, Ban, N.
登録日2019-08-03
公開日2019-09-18
最終更新日2019-09-25
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
Science, 365, 2019
7C1H
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BU of 7c1h by Molmil
Crystal structure of the starter condensation domain of rhizomide synthetase RzmA
分子名称: Non-ribosomal peptide synthetase modules
著者Zhong, L, Diao, X, Zhang, N, Li, F.W, Zhou, H.B, Chen, H.N, Ren, X, Zhang, Y, Wu, D, Bian, X.
登録日2020-05-04
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Engineering and elucidation of the lipoinitiation process in nonribosomal peptide biosynthesis.
Nat Commun, 12, 2021
7T5U
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BU of 7t5u by Molmil
Structure of E. coli MS115-1 CapH N-terminal domain
分子名称: Helix-turn-helix domain-containing protein, SULFATE ION
著者Lau, R.K, Corbett, K.D.
登録日2021-12-13
公開日2022-09-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献A conserved signaling pathway activates bacterial CBASS immune signaling in response to DNA damage.
Embo J., 41, 2022
7OB2
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BU of 7ob2 by Molmil
NMR structure of the antimicrobial RiLK1 peptide in SDS micelles
分子名称: RiLK1
著者Falcigno, L, D'Auria, G, Palmieri, G, Gogliettino, M, Agrillo, B.
登録日2021-04-20
公開日2021-11-17
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Key Physicochemical Determinants in the Antimicrobial Peptide RiLK1 Promote Amphipathic Structures.
Int J Mol Sci, 22, 2021
7BZB
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BU of 7bzb by Molmil
Crystal structure of plant sesterterpene synthase AtTPS18
分子名称: MAGNESIUM ION, PYROPHOSPHATE, Terpenoid synthase 18
著者Li, J.X, Wang, G.D, Zhang, P.
登録日2020-04-27
公開日2020-09-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.148 Å)
主引用文献Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases.
Plant Commun., 1, 2020
7T5T
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Structure of Thauera sp. K11 CapP
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CapP toxin, SULFATE ION, ...
著者Lau, R.K, Corbett, K.D.
登録日2021-12-13
公開日2022-09-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A conserved signaling pathway activates bacterial CBASS immune signaling in response to DNA damage.
Embo J., 41, 2022
8A5Y
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S. cerevisiae apo unphosphorylated APC/C.
分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 11, Anaphase-promoting complex subunit 2, ...
著者Barford, D, Fernandez-Vazquez, E, Zhang, Z, Yang, J.
登録日2022-06-16
公開日2022-08-31
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Cryo-EM structure of the S. cerevisiae APC/C-Cdh1 complex and comparison to apo unphosphorylated and phosphorylated states
To Be Published
7JXC
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BU of 7jxc by Molmil
Mapping neutralizing and immunodominant sites on the SARS-CoV-2 spike receptor-binding domain by structure-guided high-resolution serology
分子名称: NONAETHYLENE GLYCOL, S2H14 antigen-binding (Fab) fragment
著者Park, Y.J, Tortorici, M.A, Walls, A.C, Czudnochowski, N, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G, Veesler, D.
登録日2020-08-27
公開日2020-10-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell, 183, 2020
5N65
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Crystal Structure of p38alpha in Complex with Lipid Pocket Ligand 9h
分子名称: 2-phenyl-~{N}4-(2-thiophen-2-ylethyl)quinazoline-4,7-diamine, Mitogen-activated protein kinase 14
著者Buehrmann, M, Mueller, M.P, Wiedemann, B, Rauh, D.
登録日2017-02-14
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based design, synthesis and crystallization of 2-arylquinazolines as lipid pocket ligands of p38 alpha MAPK.
PLoS ONE, 12, 2017
5N6L
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Structure of the membrane integral lipoprotein N-acyltransferase Lnt C387A mutant from E. coli
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Apolipoprotein N-acyltransferase, GLYCEROL
著者Huang, C.-Y, Boland, C, Howe, N, Wiktor, M, Vogeley, L, Weichert, D, Bailey, J, Olieric, V, Wang, M, Caffrey, M.
登録日2017-02-15
公開日2017-07-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into the mechanism of the membrane integral N-acyltransferase step in bacterial lipoprotein synthesis.
Nat Commun, 8, 2017
3IA3
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A cis-proline in alpha-hemoglobin stabilizing Protein directs the structural reorganization of alpha-hemoglobin
分子名称: Alpha-hemoglobin-stabilizing protein, Hemoglobin subunit alpha, PROTOPORPHYRIN IX CONTAINING FE
著者Feng, L, Jeffrey, P.D, Shi, Y.
登録日2009-07-13
公開日2009-07-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A cis-proline in alpha-hemoglobin stabilizing protein directs the structural reorganization of alpha-hemoglobin.
J.Biol.Chem., 284, 2009

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