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PDB: 53012 件

6CQY
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Crystal Structure of Recombinant Human Acetylcholinesterase in Complex with EMPA and HI-6
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(AMINOCARBONYL)-1-[({2-[(E)-(HYDROXYIMINO)METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYRIDINIUM, ...
著者Bester, S.M, Guelta, M.A, Pegan, S.D, Height, J.J.
登録日2018-03-16
公開日2018-12-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.449 Å)
主引用文献Structural Insights of Stereospecific Inhibition of Human Acetylcholinesterase by VX and Subsequent Reactivation by HI-6.
Chem. Res. Toxicol., 31, 2018
8DDH
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Racemic mixture of FYF peptide reveals rippled beta-sheet
分子名称: PHE-TYR-PHE
著者Sawaya, M.R, Hazari, A, Eisenberg, D.E.
登録日2022-06-18
公開日2022-09-28
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.
Chem Sci, 13, 2022
7BL1
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human complex II-BATS bound to membrane-attached Rab5a-GTP
分子名称: Beclin-1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Tremel, S, Morado, D.R, Kovtun, O, Williams, R.L, Briggs, J.A.G, Munro, S, Ohashi, Y, Bertram, J, Perisic, O.
登録日2021-01-17
公開日2021-03-03
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献Structural basis for VPS34 kinase activation by Rab1 and Rab5 on membranes.
Nat Commun, 12, 2021
4X55
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Structure of the class D Beta-Lactamase OXA-225 K82D in Acyl-Enzyme Complex with Ceftazidime
分子名称: 1-({(2R)-2-[(1R)-1-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetyl]amino}-2-oxoethyl]-4-carboxy-3,6-dihydro-2H-1,3-thiazin-5-yl}methyl)pyridinium, Beta-lactamase OXA-225
著者Clasman, J.R, June, C.M, Powers, R.A, Leonard, D.A.
登録日2014-12-04
公開日2015-03-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.941 Å)
主引用文献Structural Basis of Activity against Aztreonam and Extended Spectrum Cephalosporins for Two Carbapenem-Hydrolyzing Class D beta-Lactamases from Acinetobacter baumannii.
Biochemistry, 54, 2015
6VHZ
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Klebsiella oxytoca NpsA N-terminal subdomain in complex with anthranilyl-AMSN
分子名称: 5'-{[(benzenecarbonyl)sulfamoyl]amino}-5'-deoxyadenosine, BROMIDE ION, CHLORIDE ION, ...
著者Kreitler, D.F, Gulick, A.M.
登録日2020-01-10
公開日2020-06-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Biosynthesis, Mechanism of Action, and Inhibition of the Enterotoxin Tilimycin Produced by the Opportunistic PathogenKlebsiella oxytoca.
Acs Infect Dis., 6, 2020
5K2G
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Structure of GNNQQNY from yeast prion Sup35 in space group P21 determined by MicroED
分子名称: Eukaryotic peptide chain release factor GTP-binding subunit
著者Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S.
登録日2016-05-18
公開日2016-09-14
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (1.1 Å)
主引用文献Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.
Proc.Natl.Acad.Sci.USA, 113, 2016
6VJ0
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Crystal structure of a chitin-binding protein from Moringa oleifera seeds (Mo-CBP4)
分子名称: ACETATE ION, CHLORIDE ION, Chitin-binding protein Mo-CBP4
著者Bezerra, E.H.S, Lopes, T.D.P, da Silva, F.M.S, Costa, H.P.S, Freire, V.N, Rocha, B.A.M, Sousa, D.O.B.
登録日2020-01-14
公開日2021-01-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural characterization of a lectin from Moringa oleifera seeds with imflammatory activities
To Be Published
8IOE
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Cryo-EM structure of cyanobacteria phosphoketolase in dodecameric assembly
分子名称: MAGNESIUM ION, Probable phosphoketolase, THIAMINE DIPHOSPHATE
著者Chang, C.-W, Tsai, M.-D.
登録日2023-03-11
公開日2023-06-28
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8U4D
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TRPV1 in nanodisc bound with PI-Br4, consensus structure
分子名称: (2S)-2-[(9,10-dibromooctadecanoyl)oxy]-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9R,10S)-9,10-dibromooctadecanoate, SODIUM ION, Transient receptor potential cation channel subfamily V member 1
著者Arnold, W.R, Julius, D, Cheng, Y.
登録日2023-09-10
公開日2024-05-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Structural basis of TRPV1 modulation by endogenous bioactive lipids.
Nat.Struct.Mol.Biol., 2024
5N0G
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Crystal Structure of CobH T85A (precorrin-8x methyl mutase) complexed with C5 allyl-HBA
分子名称: 3-[(1~{R},2~{S},3~{S},4~{Z},7~{S},8~{S},9~{Z},15~{R},17~{R},18~{R},19~{R})-2,7,18-tris(2-hydroxy-2-oxoethyl)-3,13,17-tris(3-hydroxy-3-oxopropyl)-1,2,7,12,12,15,17-heptamethyl-5-prop-2-enyl-3,8,15,18,19,21-hexahydrocorrin-8-yl]propanoic acid, GLYCEROL, Precorrin-8X methylmutase
著者Nemoto-Smith, E.H, Lawrence, A.D, Brown, D.G, Warren, M.J.
登録日2017-02-02
公開日2018-02-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Novel cobalamin analogues and their application in the trafficking of cobalamin in bacteria, worms and plants
To Be Published
7JIZ
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BU of 7jiz by Molmil
ScDLH
分子名称: Dienelactone hydrolase family protein
著者Schnettler Fernandez, J.D.F, Campbell, E.C, Hollfelder, F.H.
登録日2020-07-24
公開日2022-01-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献ScDLH
To Be Published
6R7P
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BU of 6r7p by Molmil
Crystal structure of oxidized Aquifex aeolicus NADH-quinone oxidoreductase subunits NuoE and NuoF S96M
分子名称: CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Wohlwend, D, Gnandt, E, Friedrich, T.
登録日2019-03-29
公開日2019-06-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献A mechanism to prevent production of reactive oxygen species by Escherichia coli respiratory complex I.
Nat Commun, 10, 2019
6GF0
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BU of 6gf0 by Molmil
Lysozyme structure determined from SFX data using a Sheet-on-Sheet chipless chip
分子名称: Lysozyme C
著者Doak, R.B, Gorel, A, Foucar, L, Gruenbein, M.L, Hilpert, M, Kloos, M, Nass Kovacs, G, Roome, C, Shoeman, R.L, Stricker, M, Tono, K, You, D, Ueda, K, Sherrel, D, Owen, R, Barends, T.R.M, Schlichting, I.
登録日2018-04-27
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystallography on a chip - without the chip: sheet-on-sheet sandwich.
Acta Crystallogr D Struct Biol, 74, 2018
6R92
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Cryo-EM structure of NCP-THF2(+1)-UV-DDB class B
分子名称: DNA damage-binding protein 1,DNA damage-binding protein 1, DNA damage-binding protein 2, Histone H2A type 1-B/E, ...
著者Matsumoto, S, Cavadini, S, Bunker, R.D, Thoma, N.H.
登録日2019-04-02
公開日2019-06-12
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献DNA damage detection in nucleosomes involves DNA register shifting.
Nature, 571, 2019
5K90
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BU of 5k90 by Molmil
Crystal structure of dimeric chlorite dismutase from Cyanothece sp. PCC7425 in complex with isothiocyanate
分子名称: Chlorite dismutase, GLYCEROL, MAGNESIUM ION, ...
著者Puehringer, D, Schaffner, I, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
登録日2016-05-31
公開日2017-06-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies.
ACS Catal, 7, 2017
6ZYH
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BU of 6zyh by Molmil
Crystal structure of GRP78 (70kDa heat shock protein 5 / BiP) ATPase domain in complex with ADP and calcium
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Endoplasmic reticulum chaperone BiP
著者Yan, Y, Preissler, S, Ron, D.
登録日2020-08-01
公開日2020-12-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Calcium depletion challenges endoplasmic reticulum proteostasis by destabilising BiP-substrate complexes.
Elife, 9, 2020
5NHF
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BU of 5nhf by Molmil
Human Erk2 with an Erk1/2 inhibitor
分子名称: 2-[2-(oxan-4-ylamino)pyrimidin-4-yl]-5-(phenylmethyl)-6,7-dihydro-1~{H}-pyrrolo[3,2-c]pyridin-4-one, Mitogen-activated protein kinase 1, SULFATE ION
著者Debreczeni, J.E, Ward, R.A, Bethel, P, Cook, C, Davies, E, Eckersley, K, Fairley, G, Feron, L, Flemington, V, Graham, M.A, Greenwood, R, Hopcroft, P, Howard, T.D, Hudson, J, James, M, Jones, C.D, Jones, C.R, Lamont, S, Lewis, R, Lindsay, N, Roberts, K, Simpson, I, StGallay, S, Swallow, S, Tonge, M.
登録日2017-03-21
公開日2017-04-19
最終更新日2017-05-10
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structure-Guided Discovery of Potent and Selective Inhibitors of ERK1/2 from a Modestly Active and Promiscuous Chemical Start Point.
J. Med. Chem., 60, 2017
7QIG
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BU of 7qig by Molmil
Infectious mouse-adapted RML scrapie prion fibril purified from terminally-infected mouse brains
分子名称: Major prion protein
著者Manka, S.W, Zhang, W, Wenborn, A, Betts, J, Joiner, S, Saibil, H.R, Collinge, J, Wadsworth, J.D.F.
登録日2021-12-14
公開日2022-07-27
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献2.7 angstrom cryo-EM structure of ex vivo RML prion fibrils.
Nat Commun, 13, 2022
7UFX
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BU of 7ufx by Molmil
Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and scaffold-insert duplexes (21mer and 10mer) containing the cognate REPE54 sequence and an additional G-C rich sequence, respectively.
分子名称: DNA (5'-D(A*AP*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*A)-3'), DNA (5'-D(A*GP*AP*CP*GP*GP*CP*CP*CP*GP*G)-3'), DNA (5'-D(A*GP*TP*CP*CP*GP*GP*GP*CP*CP*G)-3'), ...
著者Ward, A.R, Shields, E.T, Snow, C.D.
登録日2022-03-23
公開日2023-03-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds.
Acs Nano, 17, 2023
6ZXX
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Catabolic reductive dehalogenase NpRdhA, N-terminally tagged.
分子名称: 3 bromo 4 hydroxybenzoic acid, 3,5-bis(bromanyl)-4-oxidanyl-benzoic acid, BROMIDE ION, ...
著者Leys, D, Halliwell, T.
登録日2020-07-30
公開日2020-09-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Catabolic Reductive Dehalogenase Substrate Complex Structures Underpin Rational Repurposing of Substrate Scope.
Microorganisms, 8, 2020
5NHJ
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BU of 5nhj by Molmil
Human Erk2 with an Erk1/2 inhibitor
分子名称: 5-(2-methoxyethyl)-2-[2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]-6,7-dihydro-1~{H}-pyrrolo[3,2-c]pyridin-4-one, Mitogen-activated protein kinase 1, SULFATE ION
著者Debreczeni, J.E, Ward, R.A, Bethel, P, Cook, C, Davies, E, Eckersley, K, Fairley, G, Feron, L, Flemington, V, Graham, M.A, Greenwood, R, Hopcroft, P, Howard, T.D, Hudson, J, James, M, Jones, C.D, Jones, C.R, Lamont, S, Lewis, R, Lindsay, N, Roberts, K, Simpson, I, StGallay, S, Swallow, S, Tonge, M.
登録日2017-03-21
公開日2017-04-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structure-Guided Discovery of Potent and Selective Inhibitors of ERK1/2 from a Modestly Active and Promiscuous Chemical Start Point.
J. Med. Chem., 60, 2017
5JWD
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BU of 5jwd by Molmil
Crystal structure of H-2Db in complex with the LCMV-derived GP392-401 peptide
分子名称: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
著者Buratto, J, Badia-Martinez, D, Norstrom, M, Sandalova, T, Achour, A.
登録日2016-05-12
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of H-2Db in complex with the LCMV-derived peptides GP92 and GP392 explain pleiotropic effects of glycosylation on antigen presentation and immunogenicity.
PLoS ONE, 12, 2017
6WJV
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BU of 6wjv by Molmil
Structure of the Saccharomyces cerevisiae polymerase epsilon holoenzyme
分子名称: DNA polymerase epsilon catalytic subunit A, DNA polymerase epsilon subunit B, DNA polymerase epsilon subunit C, ...
著者Yuan, Z, Georgescu, R, Schauer, G.D, O'Donnell, M, Li, H.
登録日2020-04-14
公開日2020-07-08
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of the polymerase epsilon holoenzyme and atomic model of the leading strand replisome.
Nat Commun, 11, 2020
5N6Y
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Azotobacter vinelandii vanadium nitrogenase
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, C Fe7 S8 V, CARBONATE ION, ...
著者Sippel, D, Einsle, O.
登録日2017-02-16
公開日2017-07-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The structure of vanadium nitrogenase reveals an unusual bridging ligand.
Nat. Chem. Biol., 13, 2017
4YV8
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Crystal structure of cathepsin K bound to the covalent inhibitor lichostatinal
分子名称: Cathepsin K, Lichostatinal, SULFATE ION
著者Aguda, A.H, Nguyen, N.T, Bromme, D, Brayer, G.D.
登録日2015-03-19
公開日2016-05-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Affinity Crystallography: A New Approach to Extracting High-Affinity Enzyme Inhibitors from Natural Extracts.
J.Nat.Prod., 79, 2016

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