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PDB: 53012 件

8DKR
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BU of 8dkr by Molmil
Pseudomonas-phage E217 TerL nuclease domain
分子名称: Large terminase protein, MAGNESIUM ION
著者Cingolani, G, Lokareddy, R, Hou, D.
登録日2022-07-06
公開日2022-09-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Terminase Subunits from the Pseudomonas-Phage E217.
J.Mol.Biol., 434, 2022
8TL0
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BU of 8tl0 by Molmil
Structure of activated SAVED-CHAT filament
分子名称: CHAT domain-containing protein, RNA (5'-R(*AP*AP*A)-3')
著者Bravo, J.P.K, Taylor, D.W.
登録日2023-07-26
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Type III-B CRISPR-Cas cascade of proteolytic cleavages.
Science, 383, 2024
6GDS
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BU of 6gds by Molmil
Holliday Junctions formed from Telomeric DNA
分子名称: Telomeric DNA (5' CTAACCCTAA) 10mer, Telomeric DNA (5'-TTAGGGTTAG)-3') 10mer
著者Parkinson, G.N, Haider, S, Li, P, Khiali, S, Munnur, D, Ramanathan, A.
登録日2018-04-24
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Holliday Junctions Formed from Human Telomeric DNA.
J. Am. Chem. Soc., 140, 2018
6VH8
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BU of 6vh8 by Molmil
NMR Solution Structure of Excelsatoxin A
分子名称: Excelsatoxin A
著者Harvey, P.J, Durek, T, Craik, D.J.
登録日2020-01-09
公開日2020-09-30
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Neurotoxic peptides from the venom of the giant Australian stinging tree.
Sci Adv, 6, 2020
6PQN
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BU of 6pqn by Molmil
Crystal structure of HzTransib transposase
分子名称: GLYCEROL, PHOSPHATE ION, Putative DNA-mediated transposase, ...
著者Liu, C, Yang, Y, Schatz, D.G.
登録日2019-07-09
公開日2019-10-09
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structures of a RAG-like transposase during cut-and-paste transposition.
Nature, 575, 2019
5M2Z
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BU of 5m2z by Molmil
Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033)
分子名称: NS5, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Ferrero, D.S, Ruiz-Arroyo, V.M, Soler, N, Uson, I, Verdaguer, N.
登録日2016-10-13
公開日2018-06-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (4.8 Å)
主引用文献Supramolecular arrangement of the full-length Zika virus NS5.
Plos Pathog., 15, 2019
7Q71
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BU of 7q71 by Molmil
The crystallographic structure of the Ligand Binding domain of the NR7 nuclear receptor from the amphioxus Branchiostoma lanceolatum
分子名称: CHLORIDE ION, Nuclear hormone receptor 7, PHOSPHATE ION
著者Billas, I.M.L, McEwen, A.G, Hazemann, I, Moras, D, Laudet, V.
登録日2021-11-09
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A novel nuclear receptor subfamily enlightens the origin of heterodimerization.
Bmc Biol., 20, 2022
6FOA
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BU of 6foa by Molmil
Human Xylosyltransferase 1 apo structure
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATE ION, SODIUM ION, ...
著者Briggs, D.C, Hohenester, E.
登録日2018-02-06
公開日2018-05-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.869 Å)
主引用文献Structural Basis for the Initiation of Glycosaminoglycan Biosynthesis by Human Xylosyltransferase 1.
Structure, 26, 2018
6YRF
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BU of 6yrf by Molmil
Vip3Bc1 tetramer
分子名称: Vegetative insecticidal protein
著者Thompson, R.F, Byrne, M.J, Iadanza, M.I, Arribas Perez, M, Maskell, D.P, George, R.M, Hesketh, E.L, Beales, P.A, Zack, M.D, Berry, C.
登録日2020-04-20
公開日2021-03-17
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structures of an insecticidal Bt toxin reveal its mechanism of action on the membrane.
Nat Commun, 12, 2021
6G7I
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BU of 6g7i by Molmil
Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: 49-406 fs state structure
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, ...
著者Nogly, P, Weinert, T, James, D, Cabajo, S, Ozerov, D, Furrer, A, Gashi, D, Borin, V, Skopintsev, P, Jaeger, K, Nass, K, Bath, P, Bosman, R, Koglin, J, Seaberg, M, Lane, T, Kekilli, D, Bruenle, S, Tanaka, T, Wu, W, Milne, C, White, T, Barty, A, Weierstall, U, Panneels, V, Nango, E, Iwata, S, Hunter, M, Schapiro, I, Schertler, G, Neutze, R, Standfuss, J.
登録日2018-04-06
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser.
Science, 361, 2018
8DCP
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BU of 8dcp by Molmil
PI 3-kinase alpha with nanobody 3-126
分子名称: Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Hart, J.R, Liu, X, Pan, C, Liang, A, Ueno, L, Xu, Y, Quezada, A, Zou, X, Yang, S, Zhou, Q, Schoonooghe, S, Hassanzadeh-Ghassabeh, G, Xia, T, Shui, W, Yang, D, Vogt, P.K, Wang, M.-W.
登録日2022-06-17
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.41 Å)
主引用文献Nanobodies and chemical cross-links advance the structural and functional analysis of PI3K alpha.
Proc.Natl.Acad.Sci.USA, 119, 2022
6ZTS
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BU of 6zts by Molmil
Assembly intermediates of orthoreovirus captured in the cell
分子名称: Lambda-1
著者Sutton, G.C, Stuart, D.I.
登録日2020-07-20
公開日2020-09-16
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY
主引用文献Assembly intermediates of orthoreovirus captured in the cell.
Nat Commun, 11, 2020
8FLR
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BU of 8flr by Molmil
Human PTH1R in complex with PTHrP and Gs
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Cary, B.P, Belousoff, M.J, Piper, S.J, Wootten, D, Sexton, P.M.
登録日2022-12-22
公開日2023-04-26
最終更新日2023-06-14
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Molecular insights into peptide agonist engagement with the PTH receptor.
Structure, 31, 2023
8TQ9
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BU of 8tq9 by Molmil
Crystal structure of Fab.S19.8 in complex with MHC-I (H2-Dd)
分子名称: Beta-2-microglobulin, Fab.S19.8 Heavy Chain, Fab.S19.8 Light Chain, ...
著者Jiang, J, Boyd, L.F, Natarajan, K, Margulies, D.H.
登録日2023-08-06
公開日2024-03-20
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Experimental Structures of Antibody/MHC-I Complexes Reveal Details of Epitopes Overlooked by Computational Prediction.
J Immunol., 212, 2024
8U5P
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BU of 8u5p by Molmil
Structure of Mango II aptamer bound to T01-6A-B
分子名称: 3-[2,16-dioxo-20-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-6,9,12-trioxa-3,15-diazaicosan-1-yl]-2-{(E)-[6-(4-methoxyphenyl)-1-methylquinolin-4(1H)-ylidene]methyl}-1,3-benzothiazol-3-ium, Mango II, POTASSIUM ION
著者Passalacqua, L.F.M, Ferre-D'Amare, A.R.
登録日2023-09-12
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of Mango II aptamer bound to T01-6A-B
To Be Published
8FLQ
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BU of 8flq by Molmil
Human PTH1R in complex with PTH(1-34) and Gs
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Cary, B.P, Belousoff, M.J, Piper, S.J, Wootten, D, Sexton, P.M.
登録日2022-12-22
公開日2023-04-26
最終更新日2023-06-14
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Molecular insights into peptide agonist engagement with the PTH receptor.
Structure, 31, 2023
8U5T
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BU of 8u5t by Molmil
Structure of Mango II variant aptamer bound to T01-6A-B
分子名称: 3-{2,16-dioxo-20-[(3aS,4R,6aS)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-2-{(E)-[6-(4-methoxyphenyl)-1-methylquinolin-4(1H)-ylidene]methyl}-1,3-benzothiazol-3-ium, Mango II variant, POTASSIUM ION, ...
著者Passalacqua, L.F.M, Ferre-D'Amare, A.R.
登録日2023-09-12
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Mango II variant aptamer bound to T01-6A-B
To Be Published
8FWN
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BU of 8fwn by Molmil
Crystal structure of SARS-CoV-2 papain-like protease C111S mutant
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Bezerra, E.H.S, Soprano, A.S, Tonoli, C.C.C, Prado, P.F.V, da Silva, J.C, Franchini, K.G, Trivella, D.B.B, Benedetti, C.E.
登録日2023-01-23
公開日2023-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of SARS-CoV-2 papain-like protease C111S mutant
To Be Published
8DGY
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BU of 8dgy by Molmil
Structure of MERS 3CL protease in complex with the cyclopropane based inhibitor 16d (high resolution)
分子名称: 3C-like proteinase, [(1~{R},2~{R})-2-(cyclohexylmethyl)cyclopropyl]methyl ~{N}-[(2~{S})-1-[[(1~{R},2~{S})-1-[bis(oxidanyl)-oxidanylidene-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate, [(1~{R},2~{R})-2-(cyclohexylmethyl)cyclopropyl]methyl ~{N}-[(2~{S})-1-[[(1~{S},2~{S})-1-[bis(oxidanyl)-oxidanylidene-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate
著者Lovell, S, Liu, L, Battaile, K.P, Nguyen, H.N, Chamandi, S.D, Picard, H.R, Madden, T.K, Thruman, H.A, Kim, Y, Groutas, W.C, Chang, K.O.
登録日2022-06-24
公開日2022-07-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Broad-Spectrum Cyclopropane-Based Inhibitors of Coronavirus 3C-like Proteases: Biochemical, Structural, and Virological Studies.
Acs Pharmacol Transl Sci, 6, 2023
8FLS
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BU of 8fls by Molmil
Human PTH1R in complex with Abaloparatide and Gs
分子名称: Abaloparatide, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Cary, B.P, Belousoff, M.J, Piper, S.J, Wootten, D, Sexton, P.M.
登録日2022-12-22
公開日2023-04-26
最終更新日2023-06-14
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Molecular insights into peptide agonist engagement with the PTH receptor.
Structure, 31, 2023
4WSG
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BU of 4wsg by Molmil
Crystal Structure of Soluble WR PIV5 F-GCNt
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0
著者Poor, T.A, Song, A.S, Welch, B.D, Kors, C.A, Jardetzky, T.S, Lamb, R.A.
登録日2014-10-27
公開日2015-01-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of Soluble WR PIV5 F-GCNt
J.Virol., 89, 2015
6VQO
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BU of 6vqo by Molmil
T cell receptor-p53-HLA-A2 complex
分子名称: Beta-2-microglobulin, MHC class I antigen, T-cell receptor 1a2, ...
著者Wu, D, Gallagher, D.T, Pierce, B.G, Mariuzza, R.A.
登録日2020-02-05
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
8P1F
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BU of 8p1f by Molmil
X-ray structure of acetylcholine-binding protein (AChBP) in complex with FL001909.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-azanyl-1-phenyl-piperidine-4-carboxylic acid, Acetylcholine-binding protein
著者Cederfelt, D, Boronat, P, Dobritzsch, D, Hennig, S, Fitzgerald, E.A, de Esch, I.J.P, Danielson, U.H.
登録日2023-05-12
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Elucidating the regulation of ligand gated ion channels via biophysical studies of ligand-induced conformational dynamics of acetylcholine binding proteins
To Be Published
6VQN
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BU of 6vqn by Molmil
Co-crystal structure of human PD-L1 complexed with Compound A
分子名称: N,N'-(2,2'-dimethyl[1,1'-biphenyl]-3,3'-diyl)bis(5-{[(2-hydroxyethyl)amino]methyl}pyridine-2-carboxamide), Programmed cell death 1 ligand 1
著者White, A, Lakshminarasimhan, D, Leo, C, Suto, R.K.
登録日2020-02-05
公開日2021-01-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Checkpoint inhibition through small molecule-induced internalization of programmed death-ligand 1.
Nat Commun, 12, 2021
7OLR
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BU of 7olr by Molmil
Dioxygenase AsqJ in complex with 2 and alpha-ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, 4-Methoxydehydrocyclopeptin, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, ...
著者Auman, D, Mader, S.L, Ecker, F, Dorst, K, Braeuer, A, Widmalm, G, Groll, M, Kaila, V.R.I.
登録日2021-05-20
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Peroxy Intermediate Drives Carbon Bond Activation in the Dioxygenase AsqJ.
J.Am.Chem.Soc., 144, 2022

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