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PDB: 98 results

2QFD
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BU of 2qfd by Molmil
Crystal structure of the regulatory domain of human RIG-I with bound Hg
Descriptor: MERCURY (II) ION, Probable ATP-dependent RNA helicase DDX58
Authors:Cui, S, Lammens, A, Lammens, K, Hopfner, K.P.
Deposit date:2007-06-27
Release date:2008-02-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The C-Terminal Regulatory Domain Is the RNA 5'-Triphosphate Sensor of RIG-I.
Mol.Cell, 29, 2008
2QFB
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BU of 2qfb by Molmil
Crystal structure of the regulatory domain of human RIG-I with bound Zn
Descriptor: Probable ATP-dependent RNA helicase DDX58, ZINC ION
Authors:Cui, S, Lammens, A, Lammens, K, Hopfner, K.P.
Deposit date:2007-06-27
Release date:2008-02-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:The C-Terminal Regulatory Domain Is the RNA 5'-Triphosphate Sensor of RIG-I.
Mol.Cell, 29, 2008
3EIK
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BU of 3eik by Molmil
double stranded DNA binding protein
Descriptor: 1,2-ETHANEDIOL, TATA-box-binding protein
Authors:Cui, S, Wollmann, P, Moldt, M, Hopfner, K.-P.
Deposit date:2008-09-16
Release date:2009-09-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:structural studies of ecTBP
To be Published
3OCI
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BU of 3oci by Molmil
Crystal structure of TBP (TATA box binding protein)
Descriptor: 1,2-ETHANEDIOL, TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1)
Authors:Cui, S, Wollmann, P, Moldt, M, Hopfner, K.-P.
Deposit date:2010-08-10
Release date:2011-07-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP.
Nature, 475, 2011
3K1K
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BU of 3k1k by Molmil
Green fluorescent protein bound to enhancer nanobody
Descriptor: Enhancer, Green Fluorescent Protein
Authors:Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U.
Deposit date:2009-09-28
Release date:2009-12-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Modulation of protein properties in living cells using nanobodies
Nat.Struct.Mol.Biol., 17, 2010
8K9G
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BU of 8k9g by Molmil
Cryo-EM structure of Crt-SPARTA-gRNA-tDNA dimer (conformation-1)
Descriptor: DNA (45-mer), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3'), ...
Authors:Gao, X, Shang, K, Zhu, K, Wang, L, Mu, Z, Fu, X, Yu, X, Qin, B, Zhu, H, Ding, W, Cui, S.
Deposit date:2023-08-01
Release date:2023-10-18
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Nucleic-acid-triggered NADase activation of a short prokaryotic Argonaute.
Nature, 625, 2024
8YQQ
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BU of 8yqq by Molmil
Structure of HKU1B RBD with TMPRSS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, Transmembrane protease serine 2
Authors:Gao, X, Cui, S, Ding, W, Zhu, K, Shang, K, Zhu, H.
Deposit date:2024-03-19
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.95 Å)
Cite:Structural basis for the interaction between human coronavirus HKU1 spike receptor binding domain and its receptor TMPRSS2.
Cell Discov, 10, 2024
8YOY
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BU of 8yoy by Molmil
Structure of HKU1A RBD with TMPRSS2
Descriptor: Spike protein S1, Transmembrane protease serine 2
Authors:Gao, X, Cui, S, Ding, W, Shang, K, Zhu, H, Zhu, K.
Deposit date:2024-03-14
Release date:2024-08-28
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structural basis for the interaction between human coronavirus HKU1 spike receptor binding domain and its receptor TMPRSS2.
Cell Discov, 10, 2024
5WWP
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BU of 5wwp by Molmil
Crystal structure of Middle East respiratory syndrome coronavirus helicase (MERS-CoV nsp13)
Descriptor: ORF1ab, SULFATE ION, ZINC ION
Authors:Hao, W, Wojdyla, J.A, Zhao, R, Han, R, Das, R, Zlatev, I, Manoharan, M, Wang, M, Cui, S.
Deposit date:2017-01-03
Release date:2017-07-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Middle East respiratory syndrome coronavirus helicase
PLoS Pathog., 13, 2017
8J66
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BU of 8j66 by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with M3, state 2
Descriptor: (2S,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3S,4S,5R,6S)-6-[(3R,6S)-6-[(3S,8S,9R,10R,11S,13R,14S,17S)-3-[(2R,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,4,9,13,14-pentamethyl-11-oxidanyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-2-oxidanyl-heptan-3-yl]oxy-3,4,5-tris(oxidanyl)oxan-2-yl]methoxy]oxane-3,4,5-triol, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2023-04-24
Release date:2024-05-29
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structural insights into the catalytic selectivity of glycosyltransferase SgUGT94-289-3 towards mogrosides.
Nat Commun, 15, 2024
6JIJ
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BU of 6jij by Molmil
The Crystal Structure of Main Protease from Mouse Hepatitis Virus A59 in Complex with an inhibitor
Descriptor: 02J-ALA-VAL-LEU-PJE-010, Replicative polyprotein 1ab
Authors:Cui, W, Cui, S.S.
Deposit date:2019-02-21
Release date:2019-04-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The crystal structure of main protease from mouse hepatitis virus A59 in complex with an inhibitor.
Biochem. Biophys. Res. Commun., 511, 2019
7XT3
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BU of 7xt3 by Molmil
Crystal Structure of Hepatitis virus A 2C protein 128-335 aa
Descriptor: Genome polyprotein, PHOSPHATE ION
Authors:Chen, P, Wojdyla, J.A, Li, Z, Wang, M, Cui, S.
Deposit date:2022-05-16
Release date:2022-07-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Biochemical and structural characterization of hepatitis A virus 2C reveals an unusual ribonuclease activity on single-stranded RNA.
Nucleic Acids Res., 50, 2022
8K88
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BU of 8k88 by Molmil
Structure of procaryotic Ago
Descriptor: DNA (41-mer), DNA/RNA (21-mer), MAGNESIUM ION, ...
Authors:Gao, X, Sun, D, Cui, S, Wang, Y.
Deposit date:2023-07-29
Release date:2024-07-03
Last modified:2024-09-18
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Nucleic acid-induced NADase activation of a short Sir2-associated prokaryotic Argonaute system.
Cell Rep, 43, 2024
8K87
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BU of 8k87 by Molmil
Dimer structure of procaryotic Ago
Descriptor: DNA (41-mer), MAGNESIUM ION, Piwi domain protein, ...
Authors:Gao, X, Sun, D, Cui, S, Wang, Y.
Deposit date:2023-07-29
Release date:2024-07-03
Last modified:2024-09-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Nucleic acid-induced NADase activation of a short Sir2-associated prokaryotic Argonaute system.
Cell Rep, 43, 2024
4ZHS
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BU of 4zhs by Molmil
Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Trichophyton rubrum
Descriptor: Aspartate Semialdehyde Dehydrogenase, SULFATE ION
Authors:Li, Q, Cui, S.
Deposit date:2015-04-27
Release date:2016-03-02
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Structural Insights into the Tetrameric State of Aspartate-beta-semialdehyde Dehydrogenases from Fungal Species
Sci Rep, 6, 2016
2W4R
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BU of 2w4r by Molmil
Crystal structure of the regulatory domain of human LGP2
Descriptor: MERCURY (II) ION, PROBABLE ATP-DEPENDENT RNA HELICASE DHX58, SULFATE ION
Authors:Pippig, D.A, Hellmuth, J.C, Cui, S, Kirchhofer, A, Lammens, K, Lammens, A, Schmidt, A, Rothenfusser, S, Hopfner, K.P.
Deposit date:2008-12-01
Release date:2009-02-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Regulatory Domain of the Rig-I Family ATPase Lgp2 Senses Double-Stranded RNA.
Nucleic Acids Res., 37, 2009
4ZIC
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BU of 4zic by Molmil
Crystal Structure of Aspartate Semialdehyde Dehydrogenase with NADP from Trichophyton rubrum
Descriptor: Aspartate Semialdehyde Dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
Authors:Li, Q, Cui, S.
Deposit date:2015-04-28
Release date:2016-03-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.553 Å)
Cite:Structural Insights into the Tetrameric State of Aspartate-beta-semialdehyde Dehydrogenases from Fungal Species
Sci Rep, 6, 2016
8IT0
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BU of 8it0 by Molmil
Cryo-EM structure of Crt-SPARTA-gRNA-tDNA dimer (conformation-2)
Descriptor: DNA (45-mer), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3'), ...
Authors:Gao, X, Shang, K, Zhu, K, Wang, L, Mu, Z, Fu, X, Yu, X, Qin, B, Zhu, H, Ding, W, Cui, S.
Deposit date:2023-03-21
Release date:2023-10-18
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Nucleic-acid-triggered NADase activation of a short prokaryotic Argonaute.
Nature, 625, 2024
8ISZ
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BU of 8isz by Molmil
Cryo-EM structure of Crt-SPARTA-gRNA-tDNA monomer
Descriptor: DNA (45-mer), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3'), ...
Authors:Gao, X, Shang, K, Zhu, K, Wang, L, Mu, Z, Fu, X, Yu, X, Qin, B, Zhu, H, Ding, W, Cui, S.
Deposit date:2023-03-21
Release date:2023-10-18
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Nucleic-acid-triggered NADase activation of a short prokaryotic Argonaute.
Nature, 625, 2024
8ISY
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BU of 8isy by Molmil
Cryo-EM structure of free-state Crt-SPARTA
Descriptor: Piwi domain-containing protein, TIR domain-containing protein
Authors:Gao, X, Shang, K, Zhu, K, Wang, L, Mu, Z, Fu, X, Yu, X, Qin, B, Zhu, H, Ding, W, Cui, S.
Deposit date:2023-03-21
Release date:2023-10-18
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Nucleic-acid-triggered NADase activation of a short prokaryotic Argonaute.
Nature, 625, 2024
8IT1
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BU of 8it1 by Molmil
Cryo-EM structure of Crt-SPARTA-gRNA-tDNA tetramer (NADase active form)
Descriptor: DNA (45-mer), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3'), ...
Authors:Gao, X, Shang, K, Zhu, K, Wang, L, Mu, Z, Fu, X, Yu, X, Qin, B, Zhu, H, Ding, W, Cui, S.
Deposit date:2023-03-21
Release date:2023-11-08
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Nucleic-acid-triggered NADase activation of a short prokaryotic Argonaute.
Nature, 625, 2024
7YC2
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BU of 7yc2 by Molmil
Crystal structure of auxiliary protein in complex with human protein
Descriptor: ORF, Protein zyg-11 homolog B
Authors:Gao, X, Cui, S.
Deposit date:2022-06-30
Release date:2023-12-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:SARS-CoV-2 ORF10 hijacking ubiquitination machinery reveals potential unique drug targeting sites
Acta Pharm Sin B, 2024
5KWB
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BU of 5kwb by Molmil
Crystal Structure of the Receptor Binding Domain of the Spike Glycoprotein of Human Betacoronavirus HKU1 (HKU1 1A-CTD, 1.9 angstrom, molecular replacement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Spike glycoprotein, ...
Authors:Guan, H, Wojdyla, J.A, Wang, M, Cui, S.
Deposit date:2016-07-17
Release date:2017-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of the receptor binding domain of the spike glycoprotein of human betacoronavirus HKU1
Nat Commun, 8, 2017
6M40
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BU of 6m40 by Molmil
Crystal structure of the NS3-like helicase from Alongshan virus
Descriptor: NS3-like protein
Authors:Gao, X.P, Zhu, K.X, Chen, P, Wojdyla, J.A, Wang, M, Cui, S.
Deposit date:2020-03-05
Release date:2020-04-08
Last modified:2020-06-03
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Crystal structure of the NS3-like helicase from Alongshan virus.
Iucrj, 7, 2020
8GQC
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BU of 8gqc by Molmil
Crystal structure of the SARS-unique domain (SUD) of SARS-CoV-2 (1.35 angstrom resolution)
Descriptor: Papain-like protease nsp3
Authors:Qin, B, Li, Z, Aumonier, S, Wang, M, Cui, S.
Deposit date:2022-08-30
Release date:2023-07-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Identification of the SARS-unique domain of SARS-CoV-2 as an antiviral target.
Nat Commun, 14, 2023

 

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數據於2024-10-30公開中

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