Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 180 results

2Y8H
DownloadVisualize
BU of 2y8h by Molmil
STRUCTURE OF THE FIRST GAF DOMAIN E87G MUTANT OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, TWO COMPONENT SENSOR HISTIDINE KINASE DEVS
Authors:Cho, H.Y, Cho, H.J, Kang, B.S.
Deposit date:2011-02-07
Release date:2011-02-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Blockage of the Channel to Heme by the E87 Side Chain in the Gaf Domain of Mycobacterium Tuberculosis Doss Confers the Unique Sensitivity of Doss to Oxygen.
FEBS Lett., 585, 2011
7W9X
DownloadVisualize
BU of 7w9x by Molmil
Crystal structure of Bacillus subtilis YugJ in complex with nickel
Descriptor: Iron-containing alcohol dehydrogenase, NICKEL (II) ION
Authors:Cho, H.Y, Nam, M.S, Hong, H.J, Song, W.S, Yoon, S.I.
Deposit date:2021-12-11
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Structural and Biochemical Analysis of the Furan Aldehyde Reductase YugJ from Bacillus subtilis.
Int J Mol Sci, 23, 2022
5YZI
DownloadVisualize
BU of 5yzi by Molmil
Crystal Structure of Mouse Cytosolic Isocitrate Dehydrogenase complexed with Cadmium
Descriptor: CADMIUM ION, Isocitrate dehydrogenase [NADP] cytoplasmic, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cho, H.J, Kang, B.S.
Deposit date:2017-12-14
Release date:2018-07-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.519 Å)
Cite:NADP+-dependent cytosolic isocitrate dehydrogenase provides NADPH in the presence of cadmium due to the moderate chelating effect of glutathione.
J. Biol. Inorg. Chem., 23, 2018
6JJL
DownloadVisualize
BU of 6jjl by Molmil
Crystal structure of the DegP dodecamer with a modulator
Descriptor: CYS-TYR-ARG-LYS-LEU, Periplasmic serine endoprotease DegP
Authors:Cho, H, Choi, Y, Lee, H.H, Kim, S.
Deposit date:2019-02-26
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy.
Commun Biol, 3, 2020
6JJK
DownloadVisualize
BU of 6jjk by Molmil
Crystal structure of the DegP dodecamer with a modulator
Descriptor: CYS-TYR-TYR-LYS-ILE, Periplasmic serine endoprotease DegP
Authors:Cho, H, Choi, Y, Lee, H.H, Kim, S.
Deposit date:2019-02-26
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy
Commun Biol, 3, 2020
6JJO
DownloadVisualize
BU of 6jjo by Molmil
Crystal structure of the DegP dodecamer with a modulator
Descriptor: Periplasmic serine endoprotease DegP, TMB-CYRKL modulator
Authors:Cho, H, Choi, Y, Lee, H.H, Kim, S.
Deposit date:2019-02-26
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (4.157 Å)
Cite:Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy
Commun Biol, 3, 2020
2WL9
DownloadVisualize
BU of 2wl9 by Molmil
Crystal structure of catechol 2,3-dioxygenase
Descriptor: 3-METHYLCATECHOL, CATECHOL 2,3-DIOXYGENASE, FE (III) ION, ...
Authors:Cho, H.J, Kim, K.J, Kang, B.S.
Deposit date:2009-06-23
Release date:2010-09-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Substrate-Binding Mechanism of a Type I Extradiol Dioxygenase.
J.Biol.Chem., 285, 2010
2WL3
DownloadVisualize
BU of 2wl3 by Molmil
crystal structure of catechol 2,3-dioxygenase
Descriptor: CALCIUM ION, CATECHOL 2,3-DIOXYGENASE, FE (III) ION, ...
Authors:Cho, H.J, Kim, K.J, Kang, B.S.
Deposit date:2009-06-21
Release date:2010-09-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate-Binding Mechanism of a Type I Extradiol Dioxygenase.
J.Biol.Chem., 285, 2010
5YZH
DownloadVisualize
BU of 5yzh by Molmil
Crystal Structure of Mouse Cytosolic Isocitrate Dehydrogenase
Descriptor: GLYCEROL, Isocitrate dehydrogenase [NADP] cytoplasmic, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cho, H.J, Kang, B.S.
Deposit date:2017-12-14
Release date:2018-07-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:NADP+-dependent cytosolic isocitrate dehydrogenase provides NADPH in the presence of cadmium due to the moderate chelating effect of glutathione.
J. Biol. Inorg. Chem., 23, 2018
3ZXO
DownloadVisualize
BU of 3zxo by Molmil
CRYSTAL STRUCTURE OF THE MUTANT ATP-BINDING DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor: ACETATE ION, GLYCEROL, REDOX SENSOR HISTIDINE KINASE RESPONSE REGULATOR DEVS, ...
Authors:Cho, H.Y, Cho, H.J, Kang, B.S.
Deposit date:2011-08-13
Release date:2011-08-24
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Activation of ATP Binding for the Autophosphorylation of Doss, a Mycobacterium Tuberculosis Histidine Kinase Lacking an ATP-Lid Motif.
J.Biol.Chem., 288, 2013
6JPV
DownloadVisualize
BU of 6jpv by Molmil
Structural analysis of AIMP2-DX2 and HSP70 interaction
Descriptor: Heat shock 70 kDa protein 1A,Aminoacyl tRNA synthase complex-interacting multifunctional protein 2
Authors:Cho, H.Y, Son, S.Y, Jeon, Y.H.
Deposit date:2019-03-28
Release date:2019-10-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15000653 Å)
Cite:Targeting the interaction of AIMP2-DX2 with HSP70 suppresses cancer development.
Nat.Chem.Biol., 16, 2020
6K39
DownloadVisualize
BU of 6k39 by Molmil
Structural analysis of AIMP2-DX2 and HSP70 interaction
Descriptor: Heat shock 70 kDa protein 1A,Aminoacyl tRNA synthase complex-interacting multifunctional protein 2
Authors:Cho, H.Y, Son, S.Y, Jeon, Y.H.
Deposit date:2019-05-16
Release date:2019-10-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3981427 Å)
Cite:Targeting the interaction of AIMP2-DX2 with HSP70 suppresses cancer development.
Nat.Chem.Biol., 16, 2020
6LBX
DownloadVisualize
BU of 6lbx by Molmil
Crystal structure of HER2 Domain IV and Rb-H2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor tyrosine-protein kinase erbB-2, Repebody (Rb-H2)
Authors:Cho, H.S, Cha, J.S.
Deposit date:2019-11-15
Release date:2020-11-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Computationally-guided design and affinity improvement of a protein binder targeting a specific site on HER2
Comput Struct Biotechnol J, 19, 2021
7XKT
DownloadVisualize
BU of 7xkt by Molmil
Human Cx36/GJD2 (BRIL-fused mutant) gap junction channel in detergents at 2.2 Angstroms resolution
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, CHOLESTEROL HEMISUCCINATE, ...
Authors:Cho, H.J, Lee, S.N, Jeong, H, Ryu, B, Lee, H.J, Woo, J.S, Lee, H.H.
Deposit date:2022-04-20
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Cryo-EM structures of human Cx36/GJD2 neuronal gap junction channel.
Nat Commun, 14, 2023
7XKI
DownloadVisualize
BU of 7xki by Molmil
Human Cx36/GJD2 (N-terminal deletion BRIL-fused mutant) gap junction channel in soybean lipids (D6 symmetry)
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Gap junction delta-2 protein,Soluble cytochrome b562
Authors:Cho, H.J, Lee, S.N, Jeong, H, Ryu, B, Lee, H.J, Woo, J.S, Lee, H.H.
Deposit date:2022-04-19
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of human Cx36/GJD2 neuronal gap junction channel.
Nat Commun, 14, 2023
3ZXQ
DownloadVisualize
BU of 3zxq by Molmil
CRYSTAL STRUCTURE OF THE ATP-BINDING DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOST
Descriptor: CHLORIDE ION, HYPOXIA SENSOR HISTIDINE KINASE RESPONSE REGULATOR DOST
Authors:Cho, H.Y, Cho, H.J, Kang, B.S.
Deposit date:2011-08-15
Release date:2011-08-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Activation of ATP Binding for the Autophosphorylation of Doss, a Mycobacterium Tuberculosis Histidine Kinase Lacking an ATP-Lid Motif.
J.Biol.Chem., 288, 2013
1QJG
DownloadVisualize
BU of 1qjg by Molmil
Crystal structure of delta5-3-ketosteroid isomerase from Pseudomonas testosteroni in complex with equilenin
Descriptor: EQUILENIN, KETOSTEROID ISOMERASE, SULFATE ION
Authors:Cho, H.-S, Oh, B.-H.
Deposit date:1999-06-24
Release date:1999-11-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Delta-5-3-Ketosteroid Isomerase from Pseudomonas Testosteroni in Complex with Equilenin Settles the Correct Hydrogen Scheme for Transition-State Stabilization
J.Biol.Chem., 274, 1999
5VNA
DownloadVisualize
BU of 5vna by Molmil
Crystal structure of human YEATS domain
Descriptor: 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SULFATE ION, ...
Authors:Cho, H.J, Cierpicki, T.
Deposit date:2017-04-29
Release date:2018-09-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:GAS41 Recognizes Diacetylated Histone H3 through a Bivalent Binding Mode.
ACS Chem. Biol., 13, 2018
5VNB
DownloadVisualize
BU of 5vnb by Molmil
YEATS in complex with histone H3
Descriptor: 1,2-ETHANEDIOL, H3K23acK27ac peptide, SULFATE ION, ...
Authors:Cho, H.J, Cierpicki, T.
Deposit date:2017-04-29
Release date:2018-09-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:GAS41 Recognizes Diacetylated Histone H3 through a Bivalent Binding Mode.
ACS Chem. Biol., 13, 2018
1EA9
DownloadVisualize
BU of 1ea9 by Molmil
Cyclomaltodextrinase
Descriptor: CYCLOMALTODEXTRINASE
Authors:Cho, H.-S, Kim, M.-S, Oh, B.-H.
Deposit date:2001-07-12
Release date:2002-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Cyclomaltodextrinase, Neopullulanase, and Maltogenic Amylase are Nearly Indistinguishable from Each Other
J.Biol.Chem., 277, 2002
6LFK
DownloadVisualize
BU of 6lfk by Molmil
Crystal structure of KatE from atypical E. coli
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, eKatE catalase
Authors:Cho, H.S, Yoo, Y, Park, J.B.
Deposit date:2019-12-03
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of eKatE
To Be Published
1J97
DownloadVisualize
BU of 1j97 by Molmil
Phospho-Aspartyl Intermediate Analogue of Phosphoserine phosphatase
Descriptor: MAGNESIUM ION, PHOSPHATE ION, Phosphoserine Phosphatase
Authors:Cho, H, Wang, W, Kim, R, Yokota, H, Damo, S, Kim, S.-H, Wemmer, D, Kustu, S, Yan, D, Berkeley Structural Genomics Center (BSGC)
Deposit date:2001-05-24
Release date:2001-07-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:BeF(3)(-) acts as a phosphate analog in proteins phosphorylated on aspartate: structure of a BeF(3)(-) complex with phosphoserine phosphatase.
Proc.Natl.Acad.Sci.USA, 98, 2001
7E5B
DownloadVisualize
BU of 7e5b by Molmil
Crystal structure of ASC PYD Domain and Rb-B7
Descriptor: Apoptosis-associated speck-like protein containing a CARD, GLYCEROL, Repebody (Rb-B7)
Authors:Cho, H.S, Cha, J.S.
Deposit date:2021-02-18
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Oligomeric states of ASC specks regulate inflammatory responses by inflammasome in the extracellular space.
Cell Death Discov, 9, 2023
6ISE
DownloadVisualize
BU of 6ise by Molmil
Crystal structure of AMPPNP bound CK2 alpha from C. neoformans
Descriptor: 1,2-ETHANEDIOL, Casein kinase II subunit alpha, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Cho, H.S.
Deposit date:2018-11-16
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of AMPPNP bound CK2 alpha from C. neoformans
To be published
5GL7
DownloadVisualize
BU of 5gl7 by Molmil
Crystal structure of a truncated human cytosolic methionyl-tRNA synthetase
Descriptor: GLYCEROL, Methionine--tRNA ligase, cytoplasmic, ...
Authors:Cho, H.Y, Lee, H.J, Kang, B.S.
Deposit date:2016-07-08
Release date:2017-07-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.013 Å)
Cite:Crystal structure of a truncated human cytosolic methionyl-tRNA synthetase
To Be Published

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon