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PDB: 772 results

1QVB
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CRYSTAL STRUCTURE OF THE BETA-GLYCOSIDASE FROM THE HYPERTHERMOPHILE THERMOSPHAERA AGGREGANS
Descriptor: BETA-GLYCOSIDASE
Authors:Chi, Y.-I, Martinez-Cruz, L.A, Swanson, R.V, Robertson, D.E, Kim, S.-H.
Deposit date:1999-07-07
Release date:1999-07-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the beta-glycosidase from the hyperthermophile Thermosphaera aggregans: insights into its activity and thermostability.
FEBS Lett., 445, 1999
4ZMS
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BU of 4zms by Molmil
Structure of the full-length response regulator spr1814 in complex with a phosphate analogue and B3C
Descriptor: 5-amino-2,4,6-tribromobenzene-1,3-diyl dihydroperoxide, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Chi, Y.M, Park, A.
Deposit date:2015-05-04
Release date:2016-04-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural characterization of the full-length response regulator spr1814 in complex with a phosphate analogue reveals a novel conformational plasticity of the linker region
Biochem.Biophys.Res.Commun., 473, 2016
4ZMR
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Structural characterization of the full-length response regulator spr1814 in complex with a phosphate analogue reveals a novel conformational plasticity of the linker region
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Response regulator
Authors:Chi, Y.M, Park, A.
Deposit date:2015-05-04
Release date:2016-04-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural characterization of the full-length response regulator spr1814 in complex with a phosphate analogue reveals a novel conformational plasticity of the linker region
Biochem.Biophys.Res.Commun., 473, 2016
6CHT
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BU of 6cht by Molmil
HNF4alpha in complex with the corepressor EBP1 fragment
Descriptor: Hepatocyte nuclear factor 4-alpha, LAURIC ACID, Proliferation-associated protein 2G4
Authors:Chi, Y.I, Singh, P, Lee, I.K.
Deposit date:2018-02-22
Release date:2019-02-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.174 Å)
Cite:ErbB3-binding protein 1 (EBP1) represses HNF4 alpha-mediated transcription and insulin secretion in pancreatic beta-cells.
J.Biol.Chem., 294, 2019
4QIS
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BU of 4qis by Molmil
Crystal structure of Nitroalkane Oxidase from Pseudomonas aeruginosa
Descriptor: FLAVIN MONONUCLEOTIDE, Nitronate monooxygenase family protein
Authors:Chi, Y.M, Lee, J.H.
Deposit date:2014-06-02
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.906 Å)
Cite:Crystal structures and reaction mechanisms of nitroalkane oxidase (NAO) from Pseudomonas aeruginosa
To be Published
4QIT
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Crystal structure of Nitroalkane Oxidase from Pseudomonas aeruginosa in mutant complex form
Descriptor: FLAVIN MONONUCLEOTIDE, Nitronate monooxygenase family protein, nitroethane
Authors:Chi, Y.M, Lee, J.H.
Deposit date:2014-06-02
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures and reaction mechanisms of nitroalkane oxidase (NAO) from Pseudomonas aeruginosa
To be Published
4QIU
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BU of 4qiu by Molmil
Crystal structure of Nitroalkane Oxidase from Pseudomonas aeruginosa in Mutant complex form
Descriptor: 1-nitropropane, FLAVIN MONONUCLEOTIDE, Nitronate monooxygenase family protein
Authors:Chi, Y.M, Lee, J.H.
Deposit date:2014-06-02
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Crystal structures and reaction mechanisms of nitroalkane oxidase (NAO) from Pseudomonas aeruginosa
To be Published
4NQZ
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BU of 4nqz by Molmil
Crystal Structure of the Pseudomonas aeruginosa Enoyl-Acyl Carrier Protein Reductase (FabI) in apo form
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH] FabI
Authors:Chi, Y.M, Lee, J.H, Park, A.K.
Deposit date:2013-11-26
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Crystal Structures of Pseudomonas aeruginosa Enoyl-ACP Reductase (FabI) in the Presence and Absence of NAD+ and Triclosan
Bull.Korean Chem.Soc., 36, 2015
1IC8
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BU of 1ic8 by Molmil
HEPATOCYTE NUCLEAR FACTOR 1A BOUND TO DNA : MODY3 GENE PRODUCT
Descriptor: 5'-D(*CP*TP*TP*GP*GP*TP*TP*AP*AP*TP*AP*AP*TP*TP*CP*AP*CP*CP*AP*GP*A)-3', 5'-D(*TP*CP*TP*GP*GP*TP*GP*AP*AP*TP*TP*AP*TP*TP*AP*AP*CP*CP*AP*AP*G)-3', HEPATOCYTE NUCLEAR FACTOR 1-ALPHA
Authors:Chi, Y.-I, Frantz, J.D, Oh, B.-C, Hansen, L, Dhe-Paganon, S, Shoelson, S.E.
Deposit date:2001-03-30
Release date:2002-11-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Diabetes mutations delineate an atypical POU domains in HNF1-Alpha
Mol.Cell, 10, 2002
4NR0
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BU of 4nr0 by Molmil
Crystal structure of the Pseudomonas aeruginosa Enoyl-Acyl Carrier Protein Reductase (FabI) in complex with NAD+ and triclosan
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH] FabI, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRICLOSAN
Authors:Chi, Y.M, Lee, J.H, Park, A.K.
Deposit date:2013-11-26
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Crystal Structures of Pseudomonas aeruginosa Enoyl-ACP Reductase (FabI) in the Presence and Absence of NAD+ and Triclosan
Bull.Korean Chem.Soc., 36, 2015
2QUW
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BU of 2quw by Molmil
Hammerhead Ribozyme G12A mutant after cleavage
Descriptor: Hammerhead ribozyme, cleaved fragment, MAGNESIUM ION
Authors:Chi, Y.I, Scott, W.G, Kim, S.H.
Deposit date:2007-08-06
Release date:2008-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Capturing hammerhead ribozyme structures in action by modulating general base catalysis.
Plos Biol., 6, 2008
2QUS
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BU of 2qus by Molmil
Hammerhead Ribozyme G12A mutant pre-cleavage
Descriptor: Hammerhead ribozyme, MAGNESIUM ION
Authors:Chi, Y.I, Scott, W.G, Kim, S.H.
Deposit date:2007-08-06
Release date:2008-07-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Capturing hammerhead ribozyme structures in action by modulating general base catalysis.
Plos Biol., 6, 2008
1CK1
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BU of 1ck1 by Molmil
STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C3
Descriptor: PROTEIN (ENTEROTOXIN TYPE C-3), ZINC ION
Authors:Chi, Y.-I, Bohach, G.A, Stauffacher, C.V.
Deposit date:1999-04-26
Release date:2002-07-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Zinc-mediated dimerization and its effect on activity and conformation of staphylococcal enterotoxin type C.
J.Biol.Chem., 277, 2002
1CFM
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BU of 1cfm by Molmil
CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII
Descriptor: CYTOCHROME F, PROTOPORPHYRIN IX CONTAINING FE
Authors:Chi, Y.I, Huang, L.S, Zhang, Z, Fernandez-Velasco, J.G, Malkin, R, Berry, E.A.
Deposit date:1998-09-18
Release date:1999-04-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of a truncated form of cytochrome f from chlamydomonas reinhardtii.
Biochemistry, 39, 2000
3VSM
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BU of 3vsm by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
Descriptor: GLYCEROL, Occlusion-derived virus envelope protein E66
Authors:Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
Deposit date:2012-04-27
Release date:2013-05-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
2RDV
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BU of 2rdv by Molmil
RUBREDOXIN FROM DESULFOVIBRIO VULGARIS MIYAZAKI F, MONOCLINIC CRYSTAL FORM
Descriptor: FE (III) ION, RUBREDOXIN
Authors:Higuchi, Y, Yasuoka, N.
Deposit date:1998-10-07
Release date:1999-05-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure determination of rubredoxin from Desulfovibrio vulgaris Miyazaki F in two crystal forms.
Acta Crystallogr.,Sect.D, 55, 1999
7YRU
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BU of 7yru by Molmil
ALK2 antibody complex
Descriptor: Activin receptor type-1, antibody heavy chain, antibody light chain
Authors:Kawaguchi, Y, Nakamura, K, Suzuki, M, Tsuji, S, Katagiri, T.
Deposit date:2022-08-10
Release date:2023-05-17
Last modified:2023-06-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A blocking monoclonal antibody reveals dimerization of intracellular domains of ALK2 associated with genetic disorders.
Nat Commun, 14, 2023
6LVL
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BU of 6lvl by Molmil
Crystal structure of FGFR2 in complex with 1,3,5-triazine derivative
Descriptor: Fibroblast growth factor receptor 2, N-ethyl-2-[[4-[[3-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]amino]-1,3,5-triazin-2-yl]amino]benzenesulfonamide, SULFATE ION
Authors:Echizen, Y, Tateishi, Y, Amano, Y.
Deposit date:2020-02-04
Release date:2020-04-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structure-based drug design of 1,3,5-triazine and pyrimidine derivatives as novel FGFR3 inhibitors with high selectivity over VEGFR2.
Bioorg.Med.Chem., 28, 2020
8IDQ
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Crystal structure of reducing-end xylose-releasing exoxylanase in GH30 from Talaromyces cellulolyticus with xylose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Nakamichi, Y, Watanabe, M, Fujii, T, Inoue, H, Morita, T.
Deposit date:2023-02-14
Release date:2023-05-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of reducing-end xylose-releasing exoxylanase in subfamily 7 of glycoside hydrolase family 30.
Proteins, 91, 2023
8IDP
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BU of 8idp by Molmil
Crystal structure of reducing-end xylose-releasing exoxylanase in GH30 from Talaromyces cellulolyticus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Nakamichi, Y, Watanabe, M, Fujii, T, Inoue, H, Morita, T.
Deposit date:2023-02-14
Release date:2023-05-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of reducing-end xylose-releasing exoxylanase in subfamily 7 of glycoside hydrolase family 30.
Proteins, 91, 2023
4UBQ
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BU of 4ubq by Molmil
Crystal Structure of IMP-2 Metallo-beta-Lactamase from Acinetobacter spp.
Descriptor: ACETATE ION, Beta-lactamase, ZINC ION
Authors:Yamaguchi, Y, Matsueda, S, Matsunaga, K, Takashio, N, Toma-Fukai, S, Yamagata, Y, Shibata, N, Wachino, J, Shibayama, K, Arakawa, Y, Kurosaki, H.
Deposit date:2014-08-13
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of IMP-2 metallo-beta-lactamase from Acinetobacter spp.: comparison of active-site loop structures between IMP-1 and IMP-2.
Biol.Pharm.Bull., 38, 2015
8HX6
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BU of 8hx6 by Molmil
Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae
Descriptor: 4-amino-4-deoxychorismate synthase, D-MALATE, MAGNESIUM ION, ...
Authors:Nakamichi, Y, Watanabe, M.
Deposit date:2023-01-04
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural basis for the allosteric pathway of 4-amino-4-deoxychorismate synthase.
Acta Crystallogr D Struct Biol, 79, 2023
8HX7
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Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae co-crystallized with L-glutamine
Descriptor: 4-amino-4-deoxychorismate synthase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Nakamichi, Y, Watanabe, M.
Deposit date:2023-01-04
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for the allosteric pathway of 4-amino-4-deoxychorismate synthase.
Acta Crystallogr D Struct Biol, 79, 2023
8HX9
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Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae with chorismate
Descriptor: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, 4-amino-4-deoxychorismate synthase, FORMIC ACID, ...
Authors:Nakamichi, Y, Watanabe, M.
Deposit date:2023-01-04
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural basis for the allosteric pathway of 4-amino-4-deoxychorismate synthase.
Acta Crystallogr D Struct Biol, 79, 2023
8HX8
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Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae co-crystallized with chorismate
Descriptor: 4-amino-4-deoxychorismate synthase, MAGNESIUM ION, SUCCINIC ACID, ...
Authors:Nakamichi, Y, Watanabe, M.
Deposit date:2023-01-04
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis for the allosteric pathway of 4-amino-4-deoxychorismate synthase.
Acta Crystallogr D Struct Biol, 79, 2023

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