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PDB: 816 件

7O4K
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Yeast TFIIH in the contracted state within the pre-initiation complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ...
著者Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P.
登録日2021-04-06
公開日2021-06-16
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening.
Cell, 184, 2021
7O72
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Yeast RNA polymerase II transcription pre-initiation complex with closed promoter DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ...
著者Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P.
登録日2021-04-12
公開日2021-06-16
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening.
Cell, 184, 2021
8EG4
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[iU:Ag+:iU] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice
分子名称: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*(5IU)P*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*(5IU)P*AP*CP*A*(AG))-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
著者Vecchioni, S, Lu, B, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2022-09-10
公開日2023-04-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (4.18 Å)
主引用文献Metal-Mediated DNA Nanotechnology in 3D: Structural Library by Templated Diffraction.
Adv Mater, 35, 2023
2JC2
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BU of 2jc2 by Molmil
The crystal structure of the natural F112L human sorcin mutant
分子名称: SORCIN, SULFATE ION
著者Franceschini, S, Ilari, A, Colotti, G, Chiancone, E.
登録日2006-12-19
公開日2007-08-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular Basis for the Impaired Function of the Natural F112L Sorcin Mutant: X-Ray Crystal Structure, Calcium Affinity, and Interaction with Annexin Vii and the Ryanodine Receptor.
Faseb J., 22, 2008
8WUP
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BU of 8wup by Molmil
X-Ray crystal structure of glycoside hydrolase family 6 cellobiohydrolase from Phanerochaete chrysosporium PcCel6A wild-type
分子名称: Glucanase
著者Yamaguchi, S, Sunagawa, N, Tachioka, M, Igarashi, K.
登録日2023-10-20
公開日2024-09-04
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Thermotolerance Mechanism of Fungal GH6 Cellobiohydrolase. Part II. Structural Analysis of Thermotolerant Mutant from the Basidiomycete Phanerochaete chrysosporium.
J Appl Glycosci (1999), 71, 2024
8WW5
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BU of 8ww5 by Molmil
X-Ray crystal structure of glycoside hydrolase family 6 cellobiohydrolase from Phanerochaete chrysosporium PcCel6A C240S
分子名称: Glucanase
著者Yamaguchi, S, Sunagawa, N, Tachioka, M, Igarashi, K.
登録日2023-10-24
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Thermotolerance Mechanism of Fungal GH6 Cellobiohydrolase. Part II. Structural Analysis of Thermotolerant Mutant from the Basidiomycete Phanerochaete chrysosporium.
J Appl Glycosci (1999), 71, 2024
8WWT
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BU of 8wwt by Molmil
X-Ray crystal structure of glycoside hydrolase family 6 cellobiohydrolase from Phanerochaete chrysosporium PcCel6A C393S
分子名称: Glucanase
著者Yamaguchi, S, Sunagawa, N, Tachioka, M, Igarashi, K.
登録日2023-10-26
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Thermotolerance Mechanism of Fungal GH6 Cellobiohydrolase. Part II. Structural Analysis of Thermotolerant Mutant from the Basidiomycete Phanerochaete chrysosporium.
J Appl Glycosci (1999), 71, 2024
8WX6
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BU of 8wx6 by Molmil
X-Ray crystal structure of glycoside hydrolase family 6 cellobiohydrolase from Phanerochaete chrysosporium PcCel6A C240S/C393S
分子名称: Glucanase
著者Yamaguchi, S, Sunagawa, N, Tachioka, M, Igarashi, K.
登録日2023-10-27
公開日2024-09-04
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Thermotolerance Mechanism of Fungal GH6 Cellobiohydrolase. Part II. Structural Analysis of Thermotolerant Mutant from the Basidiomycete Phanerochaete chrysosporium.
J Appl Glycosci (1999), 71, 2024
8G63
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Ralimetinib (LY2228820) in complex with wild type EGFR
分子名称: Epidermal growth factor receptor, ralimetinib
著者Chitnis, S.P, Heppner, D.E.
登録日2023-02-14
公開日2023-10-11
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Inhibition of a lower potency target drives the anticancer activity of a clinical p38 inhibitor.
Cell Chem Biol, 30, 2023
8A11
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Cryo-EM structure of the Human SHMT1-RNA complex
分子名称: PYRIDOXAL-5'-PHOSPHATE, Serine hydroxymethyltransferase, cytosolic
著者Spizzichino, S, Marabelli, C, Bharadwaj, A, Jakobi, A.J, Chaves-Sanjuan, A, Giardina, G, Bolognesi, M, Cutruzzola, F.
登録日2022-05-30
公開日2023-06-14
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1.
Mol.Cell, 2024
2KZR
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BU of 2kzr by Molmil
Solution NMR Structure of Ubiquitin thioesterase OTU1 (EC 3.1.2.-) from Mus musculus, Northeast Structural Genomics Consortium Target MmT2A
分子名称: Ubiquitin thioesterase OTU1
著者Chitayat, S, Gutmanas, A, Lemak, A, Yee, A, Bezsonova, I, Wu, B, Doherty, R.S, Semesi, A, Montelione, G.T, Arrowsmith, C.H, Dhe-Paganon, S, Northeast Structural Genomics Consortium (NESG)
登録日2010-06-23
公開日2010-07-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Northeast Structural Genomics Consortium Target MmT2A
To be Published
7SDM
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BU of 7sdm by Molmil
[U:Ag+:S] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice
分子名称: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*UP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*(IMC)P*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
著者Vecchioni, S, Lu, B, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2021-09-29
公開日2022-10-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (4.01 Å)
主引用文献Metal-Mediated DNA Nanotechnology in 3D: Structural Library by Templated Diffraction.
Adv Mater, 2023
7SDT
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BU of 7sdt by Molmil
[iU:Ag+:S] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice
分子名称: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*(5IU)P*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*(IMC)P*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
著者Vecchioni, S, Lu, B, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2021-09-29
公開日2022-10-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Metal-Mediated DNA Nanotechnology in 3D: Structural Library by Templated Diffraction.
Adv Mater, 2023
7SDF
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BU of 7sdf by Molmil
[C:Ag+:S] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice
分子名称: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*CP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*(IMC)P*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
著者Vecchioni, S, Lu, B, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2021-09-29
公開日2022-10-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献Metal-Mediated DNA Nanotechnology in 3D: Structural Library by Templated Diffraction.
Adv Mater, 2023
7SGA
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BU of 7sga by Molmil
[C-S] DNA mismatch in a self-assembling rhombohedral lattice
分子名称: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*CP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*(IMC)P*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
著者Vecchioni, S, Lu, B, Bernfeld, W, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2021-10-05
公開日2022-10-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Metal-Mediated DNA Nanotechnology in 3D: Structural Library by Templated Diffraction.
Adv Mater, 2023
2JNK
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BU of 2jnk by Molmil
Solution structure of a dockerin-containing modular pair from a family 84 glycoside hydrolase
分子名称: Hyalurononglucosaminidase
著者Chitayat, S, Adams, J.J, Bayer, E.A, Smith, S.P.
登録日2007-01-26
公開日2008-01-29
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献The solution structure of the C-terminal modular pair from Clostridium perfringens mu-toxin reveals a noncellulosomal dockerin module
J.Mol.Biol., 381, 2008
7R95
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BU of 7r95 by Molmil
Membrane bound structure of HR1 domain of SARS-CoV-2 spike protein
分子名称: Spike protein S2
著者Chiliveri, S.C, Bax, A.
登録日2021-06-28
公開日2021-10-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Transient lipid-bound states of spike protein heptad repeats provide insights into SARS-CoV-2 membrane fusion.
Sci Adv, 7, 2021
8QK5
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BU of 8qk5 by Molmil
Structure of K. pneumoniae LpxH in complex with EBL-3647
分子名称: 5-[[3-(aminomethyl)azetidin-1-yl]methyl]-N-[4-[4-(4-cyano-6-methyl-pyrimidin-2-yl)piperazin-1-yl]sulfonylphenyl]-2-[methyl(methylsulfonyl)amino]benzamide, MANGANESE (II) ION, UDP-2,3-diacylglucosamine hydrolase
著者Sooriyaarachchi, S, Bergfors, T, Jones, T.A, Mowbray, S.L.
登録日2023-09-14
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Antibiotic class with potent in vivo activity targeting lipopolysaccharide synthesis in Gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 121, 2024
8QK2
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Structure of K.pneumoniae LpxH in complex with EBL-3339
分子名称: MANGANESE (II) ION, UDP-2,3-diacylglucosamine hydrolase, ~{N}-[4-[4-(4-cyano-6-methyl-pyrimidin-2-yl)piperazin-1-yl]sulfonylphenyl]-2-[methyl(methylsulfonyl)amino]benzamide
著者Sooriyaarachchi, S, Bergfors, T, Jones, T.A, Mowbray, S.L.
登録日2023-09-14
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Antibiotic class with potent in vivo activity targeting lipopolysaccharide synthesis in Gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 121, 2024
8QJZ
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BU of 8qjz by Molmil
Crystal structure of E. coli LpxH in complex with lipid X
分子名称: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, MANGANESE (II) ION, UDP-2,3-diacylglucosamine hydrolase
著者Sooriyaarachchi, S, Bergfors, T, Jones, T.A, Mowbray, S.L.
登録日2023-09-14
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Antibiotic class with potent in vivo activity targeting lipopolysaccharide synthesis in Gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 121, 2024
8QKA
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BU of 8qka by Molmil
Structure of K. pneumoniae LpxH in complex with JEDI-852
分子名称: 2-[methyl(methylsulfonyl)amino]-~{N}-(4-piperidin-1-ylsulfonylphenyl)benzamide, MANGANESE (II) ION, UDP-2,3-diacylglucosamine hydrolase
著者Sooriyaarachchi, S, Bergfors, T, Jones, T.A, Mowbray, S.L.
登録日2023-09-14
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Antibiotic class with potent in vivo activity targeting lipopolysaccharide synthesis in Gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 121, 2024
8QK9
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BU of 8qk9 by Molmil
Structure of E. coli LpxH in complex with JEDI-1444
分子名称: 2-[methyl(methylsulfonyl)amino]-~{N}-[4-[4-[3-(trifluoromethyl)phenyl]piperazin-1-yl]sulfonylphenyl]benzamide, MANGANESE (II) ION, UDP-2,3-diacylglucosamine hydrolase
著者Sooriyaarachchi, S, Bergfors, T, Jones, T.A, Mowbray, S.L.
登録日2023-09-14
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Antibiotic class with potent in vivo activity targeting lipopolysaccharide synthesis in Gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 121, 2024
2HTA
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BU of 2hta by Molmil
Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in orthorhombic form
分子名称: GLYCEROL, Putative enzyme related to aldose 1-epimerase, SULFATE ION
著者Chittori, S, Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
登録日2006-07-25
公開日2007-01-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the putative mutarotase YeaD from Salmonella typhimurium: structural comparison with galactose mutarotases.
Acta Crystallogr.,Sect.D, 63, 2007
2HTB
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BU of 2htb by Molmil
Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form
分子名称: Putative enzyme related to aldose 1-epimerase
著者Chittori, S, Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
登録日2006-07-25
公開日2007-01-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the putative mutarotase YeaD from Salmonella typhimurium: structural comparison with galactose mutarotases.
Acta Crystallogr.,Sect.D, 63, 2007
1AHM
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DER F 2, THE MAJOR MITE ALLERGEN FROM DERMATOPHAGOIDES FARINAE, NMR, 10 STRUCTURES
分子名称: DER F 2
著者Ichikawa, S, Hatanaka, H, Yuuki, T, Iwamoto, N, Ogura, K, Okumura, Y, Inagaki, F.
登録日1997-04-07
公開日1998-04-08
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Solution structure of Der f 2, the major mite allergen for atopic diseases.
J.Biol.Chem., 273, 1998

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