Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 348 results

2VGF
DownloadVisualize
BU of 2vgf by Molmil
HUMAN ERYTHROCYTE PYRUVATE KINASE: T384M mutant
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 2-PHOSPHOGLYCOLIC ACID, MANGANESE (II) ION, ...
Authors:Valentini, G, Chiarelli, L.R, Fortin, R, Dolzan, M, Galizzi, A, Abraham, D.J, Wang, C, Bianchi, P, Zanella, A, Mattevi, A.
Deposit date:2007-11-12
Release date:2007-11-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure and Function of Human Erythrocyte Pyruvate Kinase. Molecular Basis of Nonspherocytic Hemolytic Anemia.
J.Biol.Chem., 277, 2002
2VGB
DownloadVisualize
BU of 2vgb by Molmil
HUMAN ERYTHROCYTE PYRUVATE KINASE
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 2-PHOSPHOGLYCOLIC ACID, MANGANESE (II) ION, ...
Authors:Valentini, G, Chiarelli, L, Fortin, R, Dolzan, M, Galizzi, A, Abraham, D.J, Wang, C, Bianchi, P, Zanella, A, Mattevi, A.
Deposit date:2007-11-12
Release date:2007-11-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structure and Function of Human Erythrocyte Pyruvate Kinase. Molecular Basis of Nonspherocytic Hemolytic Anemia.
J.Biol.Chem., 277, 2002
1M0F
DownloadVisualize
BU of 1m0f by Molmil
Structural Studies of Bacteriophage alpha3 Assembly, Cryo-electron microscopy
Descriptor: Capsid Protein F, Major Spike Protein G, Scaffolding Protein B, ...
Authors:Bernal, R.A, Hafenstein, S, Olson, N.H, Bowman, V.D, Chipman, P.R, Baker, T.S, Fane, B.A, Rossmann, M.G.
Deposit date:2002-06-12
Release date:2002-12-25
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structural Studies of Bacteriophage alpha3 Assembly
J.Mol.Biol., 325, 2003
2VGI
DownloadVisualize
BU of 2vgi by Molmil
HUMAN ERYTHROCYTE PYRUVATE KINASE: R486W MUTANT
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 2-PHOSPHOGLYCOLIC ACID, MANGANESE (II) ION, ...
Authors:Valentini, G, Chiarelli, L, Fortin, R, Dolzan, M, Galizzi, A, Abraham, D.J, Wang, C, Bianchi, P, Zanella, A, Mattevi, A.
Deposit date:2007-11-13
Release date:2007-11-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Structure and Function of Human Erythrocyte Pyruvate Kinase. Molecular Basis of Nonspherocytic Hemolytic Anemia.
J.Biol.Chem., 277, 2002
5V58
DownloadVisualize
BU of 5v58 by Molmil
Crystal structure of human prolyl-tRNA synthetase in complex with Aze-SA
Descriptor: 5'-O-{[(2S)-azetidine-2-carbonyl]sulfamoyl}adenosine, Bifunctional glutamate/proline--tRNA ligase, ZINC ION
Authors:Zhou, H, Song, Y, Schimmel, P.
Deposit date:2017-03-13
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Double mimicry evades tRNA synthetase editing by toxic vegetable-sourced non-proteinogenic amino acid.
Nat Commun, 8, 2017
2N0H
DownloadVisualize
BU of 2n0h by Molmil
NMR structure of Neuromedin C in presence of SDS micelles
Descriptor: Neuromedin C (NMC)
Authors:Adrover, M, Sanchis, P, Vilanova, B, Pauwels, K, Martorell, G, Perez, J.
Deposit date:2015-03-05
Release date:2015-10-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Conformational ensembles of neuromedin C reveal a progressive coil-helix transition within a binding-induced folding mechanism.
RSC ADV, 5, 2015
1N3L
DownloadVisualize
BU of 1n3l by Molmil
Crystal structure of a human aminoacyl-tRNA synthetase cytokine
Descriptor: GLYCEROL, SULFATE ION, tyrosyl-tRNA synthetase
Authors:Yang, X.-L, Skene, R.J, McRee, D.E, Schimmel, P.
Deposit date:2002-10-28
Release date:2002-11-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Crystal structure of a human aminoacyl-tRNA synthetase cytokine
Proc.Natl.Acad.Sci.USA, 99, 2002
1Q7S
DownloadVisualize
BU of 1q7s by Molmil
Crystal structure of bit1
Descriptor: bit1
Authors:De Pereda, J.M, Waas, W.F, Jan, Y, Ruoslahti, E, Schimmel, P, Pascual, J.
Deposit date:2003-08-19
Release date:2003-12-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a human peptidyl-tRNA hydrolase reveals a new fold and suggests basis for a bifunctional activity.
J.Biol.Chem., 279, 2004
2N0G
DownloadVisualize
BU of 2n0g by Molmil
NMR structure of Neuromedin C in 90% TFE
Descriptor: Neuromedin C (NMC)
Authors:Adrover, M, Sanchis, P, Vilanova, B, Pauwels, K, Martorell, G, Perez, J.
Deposit date:2015-03-05
Release date:2015-10-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Conformational ensembles of neuromedin C reveal a progressive coil-helix transition within a binding-induced folding mechanism.
RSC ADV, 5, 2015
6UZV
DownloadVisualize
BU of 6uzv by Molmil
The structure of a red shifted photosystem I complex
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Toporik, H, Williams, D, Chiu, P.L, Mazor, Y.
Deposit date:2019-11-15
Release date:2020-09-16
Last modified:2020-11-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structure of a red-shifted photosystem I reveals a red site in the core antenna.
Nat Commun, 11, 2020
1NA4
DownloadVisualize
BU of 1na4 by Molmil
The structure of immature Yellow Fever virus particle
Descriptor: major envelope protein E
Authors:Zhang, Y, Corver, J, Chipman, P.R, Lenches, E, Zhang, W, Pletnev, S.V, Sedlak, D, Baker, T.S, Strauss, J.H, Kuhn, R.J, Rossmann, M.G.
Deposit date:2002-11-26
Release date:2003-12-09
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY
Cite:Structures of immature flavivirus particles
EMBO J., 22, 2003
4KI9
DownloadVisualize
BU of 4ki9 by Molmil
Crystal structure of the catalytic domain of human DUSP12 at 2.0 A resolution
Descriptor: Dual specificity protein phosphatase 12, PHOSPHATE ION
Authors:Jeon, T.J, Chien, P.N, Ku, B, Kim, S.J, Ryu, S.E.
Deposit date:2013-05-02
Release date:2014-02-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The family-wide structure and function of human dual-specificity protein phosphatases
Acta Crystallogr.,Sect.D, 70, 2014
1N6G
DownloadVisualize
BU of 1n6g by Molmil
The structure of immature Dengue-2 prM particles
Descriptor: major envelope protein E
Authors:Zhang, Y, Corver, J, Chipman, P.R, Zhang, W, Pletnev, S.V, Sedlak, D, Baker, T.S, Strauss, J.H, Kuhn, R.J, Rossmann, M.G.
Deposit date:2002-11-10
Release date:2003-06-03
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structures of Immature flavivirus particles
EMBO J., 22, 2003
5V59
DownloadVisualize
BU of 5v59 by Molmil
Crystal structure of catalytic fragment of human AlaRS in complex with Aze-SA
Descriptor: 5'-O-{[(2S)-azetidine-2-carbonyl]sulfamoyl}adenosine, Alanine--tRNA ligase, cytoplasmic
Authors:Zhou, H, Song, Y, Schimmel, P.
Deposit date:2017-03-13
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Double mimicry evades tRNA synthetase editing by toxic vegetable-sourced non-proteinogenic amino acid.
Nat Commun, 8, 2017
8CNZ
DownloadVisualize
BU of 8cnz by Molmil
mmLarE-[4Fe-4S] phased by Fe-SAD
Descriptor: CHLORIDE ION, IODIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Pecqueur, L, Zecchin, P, Golinelli-Pimpaneau, B.
Deposit date:2023-02-24
Release date:2024-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure-based insights into the mechanism of [4Fe-4S]-dependent sulfur insertase LarE.
Protein Sci., 33, 2024
5T5S
DownloadVisualize
BU of 5t5s by Molmil
A fragment of a human tRNA synthetase
Descriptor: Alanine--tRNA ligase, cytoplasmic
Authors:Sun, L, Schimmel, P.
Deposit date:2016-08-31
Release date:2016-11-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Two crystal structures reveal design for repurposing the C-Ala domain of human AlaRS.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5IPI
DownloadVisualize
BU of 5ipi by Molmil
Structure of Adeno-associated virus type 2 VLP
Descriptor: Capsid protein VP1
Authors:Drouin, L.M, Lins, B, Janssen, M.E, Bennet, A, Chipman, P, McKenna, R, Chen, W, Muzyczka, N, Cardone, G, Baker, T.S, Agbandje-McKenna, M.
Deposit date:2016-03-09
Release date:2016-07-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-electron Microscopy Reconstruction and Stability Studies of the Wild Type and the R432A Variant of Adeno-associated Virus Type 2 Reveal that Capsid Structural Stability Is a Major Factor in Genome Packaging.
J.Virol., 90, 2016
5IPK
DownloadVisualize
BU of 5ipk by Molmil
Structure of the R432A variant of Adeno-associated virus type 2 VLP
Descriptor: Capsid protein VP1
Authors:Drouin, L.M, Lins, B, Janssen, M.E, Bennet, A, Chipman, P, McKenna, R, Chen, W, Muzyczka, N, Cardone, G, Baker, T.S, Agbandje-McKenna, M.
Deposit date:2016-03-09
Release date:2016-07-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-electron Microscopy Reconstruction and Stability Studies of the Wild Type and the R432A Variant of Adeno-associated Virus Type 2 Reveal that Capsid Structural Stability Is a Major Factor in Genome Packaging.
J.Virol., 90, 2016
7E8Q
DownloadVisualize
BU of 7e8q by Molmil
Crystal structure of a Flavin-dependent Monooxygenase HadA F441V mutant complexed with reduced FAD and 4-nitrophenol
Descriptor: Chlorophenol monooxygenase, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, P-NITROPHENOL
Authors:Pimviriyakul, P, Jaruwat, A, Chitnumsub, P, Chaiyen, P.
Deposit date:2021-03-02
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into a flavin-dependent dehalogenase HadA explain catalysis and substrate inhibition via quadruple pi-stacking.
J.Biol.Chem., 297, 2021
3ISS
DownloadVisualize
BU of 3iss by Molmil
Crystal structure of enolpyruvyl-UDP-GlcNAc synthase (MurA):UDP-N-acetylmuramic acid:phosphite from Escherichia coli
Descriptor: PHOSPHITE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
Authors:Jackson, S.G, Zhang, F, Chindemi, P, Junop, M.S, Berti, P.J.
Deposit date:2009-08-27
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Evidence of Kinetic Control of Ligand Binding and Staged Product Release in MurA (Enolpyruvyl UDP-GlcNAc Synthase)-Catalyzed Reactions .
Biochemistry, 48, 2009
7E8P
DownloadVisualize
BU of 7e8p by Molmil
Crystal structure of a Flavin-dependent Monooxygenase HadA wild type complexed with reduced FAD and 4-nitrophenol
Descriptor: Chlorophenol monooxygenase, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, P-NITROPHENOL
Authors:Pimviriyakul, P, Jaruwat, A, Chitnumsub, P, Chaiyen, P.
Deposit date:2021-03-02
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into a flavin-dependent dehalogenase HadA explain catalysis and substrate inhibition via quadruple pi-stacking.
J.Biol.Chem., 297, 2021
7ETF
DownloadVisualize
BU of 7etf by Molmil
Crystal structure of AbHpaI-Mn-pyruvate-succinic semialdehyde complex, Class II aldolase, HpaI from Acinetobacter baumannii
Descriptor: 4-hydroxy-2-oxoheptanedioate aldolase, 4-oxobutanoic acid, CALCIUM ION, ...
Authors:Watthaisong, P, Binlaeh, A, Jaruwat, A, Chaiyen, P, Chitnumsub, P, Maenpuen, S.
Deposit date:2021-05-12
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Catalytic and structural insights into a stereospecific and thermostable Class II aldolase HpaI from Acinetobacter baumannii.
J.Biol.Chem., 297, 2021
7ETG
DownloadVisualize
BU of 7etg by Molmil
Crystal structure of AbHpaI-Co-pyruvate-succinic semialdehyde complex, Class II aldolase, HpaI from Acinetobacter baumannii
Descriptor: 4-hydroxy-2-oxoheptanedioate aldolase, 4-oxobutanoic acid, CALCIUM ION, ...
Authors:Watthaisong, P, Binlaeh, A, Jaruwat, A, Chaiyen, P, Chitnumsub, P, Maenpuen, S.
Deposit date:2021-05-12
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Catalytic and structural insights into a stereospecific and thermostable Class II aldolase HpaI from Acinetobacter baumannii.
J.Biol.Chem., 297, 2021
7ETH
DownloadVisualize
BU of 7eth by Molmil
Crystal structure of AbHpaI-Zn-pyruvate-propionaldehyde complex, Class II aldolase, HpaI from Acinetobacter baumannii
Descriptor: 4-hydroxy-2-oxoheptanedioate aldolase, CALCIUM ION, PROPANAL, ...
Authors:Watthaisong, P, Binlaeh, A, Jaruwat, A, Chaiyen, P, Chitnumsub, P, Maenpuen, S.
Deposit date:2021-05-12
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Catalytic and structural insights into a stereospecific and thermostable Class II aldolase HpaI from Acinetobacter baumannii.
J.Biol.Chem., 297, 2021
7ETI
DownloadVisualize
BU of 7eti by Molmil
Crystal structure of AbHpaI-Zn-pyruvate-4-hydroxybenzaldehyde complex, Class II aldolase, HpaI from Acinetobacter baumannii
Descriptor: 4-hydroxy-2-oxoheptanedioate aldolase, CALCIUM ION, P-HYDROXYBENZALDEHYDE, ...
Authors:Watthaisong, P, Binlaeh, A, Jaruwat, A, Chaiyen, P, Chitnumsub, P, Maenpuen, S.
Deposit date:2021-05-12
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Catalytic and structural insights into a stereospecific and thermostable Class II aldolase HpaI from Acinetobacter baumannii.
J.Biol.Chem., 297, 2021

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon