Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 613 results

5NYL
DownloadVisualize
BU of 5nyl by Molmil
Crystal structure of an atypical poplar thioredoxin-like2.1 active site mutant
Descriptor: Thioredoxin-like protein 2.1
Authors:Chibani, K, Saul, F.A, Haouz, A, Rouhier, N.
Deposit date:2017-05-11
Release date:2018-02-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural snapshots along the reaction mechanism of the atypical poplar thioredoxin-like2.1.
FEBS Lett., 592, 2018
1V28
DownloadVisualize
BU of 1v28 by Molmil
Solution structure of paralytic peptide of the wild Silkmoth, Antheraea yamamai
Descriptor: Paralytic Peptide
Authors:Kawaguchi, K, Ying, A, Suzuki, K, Kumaki, Y, Demura, M, Nitta, K.
Deposit date:2003-10-09
Release date:2004-10-26
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural characterization of paralytic peptide of the wild Silkmoth Antheraea yamamai by NMR
To be Published
6LP1
DownloadVisualize
BU of 6lp1 by Molmil
Crystal structure of acetate:succinate CoA transferase (ASCT) from Trypanosoma brucei.
Descriptor: CALCIUM ION, GLYCEROL, Succinyl-CoA:3-ketoacid-coenzyme A transferase
Authors:Mochizuki, K, Inaoka, D.K, Shiba, T, Fukuda, K, Kurasawa, H, Mazet, M, Millerioux, Y, Bringaud, F, Boshart, M, Balogun, E.O, Harada, S, Hirayama, K, Kita, K.
Deposit date:2020-01-08
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The ASCT/SCS cycle fuels mitochondrial ATP and acetate production in Trypanosoma brucei.
Biochim Biophys Acta Bioenerg, 1861, 2020
4KBY
DownloadVisualize
BU of 4kby by Molmil
mSTING/c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Stimulator of interferon genes protein
Authors:Chin, K.H, Su, Y.C, Tu, J.L, Chou, S.H.
Deposit date:2013-04-24
Release date:2013-05-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Novel c-di-GMP recognition modes of the mouse innate immune adaptor protein STING
Acta Crystallogr.,Sect.D, 69, 2013
4KC0
DownloadVisualize
BU of 4kc0 by Molmil
mSTING
Descriptor: Stimulator of interferon genes protein
Authors:Chin, K.H, Su, Y.C, Tu, J.L, Chou, S.H.
Deposit date:2013-04-24
Release date:2013-05-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Novel c-di-GMP recognition modes of the mouse innate immune adaptor protein STING
Acta Crystallogr.,Sect.D, 69, 2013
5L82
DownloadVisualize
BU of 5l82 by Molmil
NMR Structure of Enterocin K1 in 50%/50% TFE/Water
Descriptor: Enterococcin K1
Authors:Ovchinnikov, K, Kristiansen, P.E, Diep, D.
Deposit date:2016-06-06
Release date:2017-05-17
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The Leaderless Bacteriocin Enterocin K1 Is Highly Potent against Enterococcus faecium: A Study on Structure, Target Spectrum and Receptor.
Front Microbiol, 8, 2017
2WD5
DownloadVisualize
BU of 2wd5 by Molmil
SMC hinge heterodimer (Mouse)
Descriptor: STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 1A, STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Authors:Michie, K.A, Haering, C.H, Nasmyth, K, Lowe, J.
Deposit date:2009-03-20
Release date:2010-08-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Positively Charged Channel within the Smc1/Smc3 Hinge Required for Sister Chromatid Cohesion.
Embo J., 30, 2011
4PR9
DownloadVisualize
BU of 4pr9 by Molmil
Human Vinculin (residues 891-1066) in complex with PIP
Descriptor: GLYCEROL, Vinculin, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Chinthalapudi, K, Rangarajan, E.S, Patil, D, Izard, T.
Deposit date:2014-03-05
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Mechanism and function of lipid-directed oligomerization of vinculin
To be Published
2DDX
DownloadVisualize
BU of 2ddx by Molmil
Crystal structure of beta-1,3-xylanase from Vibrio sp. AX-4
Descriptor: GLYCEROL, MAGNESIUM ION, beta-1,3-xylanase
Authors:Sakaguchi, K.
Deposit date:2006-02-06
Release date:2007-02-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:Atomic resolution analysis of beta-1,3-xylanase catalytic module from Vibrio sp. AX-4
To be Published
7CNV
DownloadVisualize
BU of 7cnv by Molmil
Crystal structure of IscU H106C variant
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Nitrogen-fixing NifU domain protein, ...
Authors:Kunichika, K, Takahashi, Y, Fujishiro, T.
Deposit date:2020-08-03
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:[2Fe-2S] clusters-assembled dimeric structures of IscU iron-sulfur scaffold
to be published
2E12
DownloadVisualize
BU of 2e12 by Molmil
The crystal structure of XC5848 from Xanthomonas campestris adopting a novel variant of Sm-like motif
Descriptor: Hypothetical protein XCC3642
Authors:Chin, K.-H, Ruan, S.-K, Wang, A.H.-J, Chou, S.-H.
Deposit date:2006-10-17
Release date:2007-10-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:XC5848, an ORFan protein from Xanthomonas campestris, adopts a novel variant of Sm-like motif
Proteins, 68, 2007
1VD7
DownloadVisualize
BU of 1vd7 by Molmil
Solution structure of FMBP-1 tandem repeat 1
Descriptor: Fibroin-modulator-binding-protein-1
Authors:Kawaguchi, K, Yamaki, T, Aizawa, T, Takiya, S, Demura, M, Nitta, K.
Deposit date:2004-03-20
Release date:2005-03-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of FMBP-1 tandem repeat 1
To be Published
5K6P
DownloadVisualize
BU of 5k6p by Molmil
The NMR structure of the m domain tri-helix bundle and C2 of human cardiac Myosin Binding Protein C
Descriptor: Myosin-binding protein C, cardiac-type
Authors:Michie, K.A, Kwan, A.H, Tung, C.S, Guss, J.M, Trewhella, J.
Deposit date:2016-05-25
Release date:2016-11-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Highly Conserved Yet Flexible Linker Is Part of a Polymorphic Protein-Binding Domain in Myosin-Binding Protein C.
Structure, 24, 2016
1VD9
DownloadVisualize
BU of 1vd9 by Molmil
Solution structure of FMBP-1 tandem repeat 3
Descriptor: Fibroin-modulator-binding-protein-1
Authors:Kawaguchi, K, Yamaki, T, Aizawa, T, Takiya, S, Demura, M, Nitta, K.
Deposit date:2004-03-20
Release date:2005-03-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of FMBP-1 tandem repeat 3
To be Published
5H5O
DownloadVisualize
BU of 5h5o by Molmil
A cyclic-GMP-dependent signalling pathway regulates bacterial phytopathogenesis
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, Diguanylate cyclase
Authors:Chin, K.H, Chou, S.-H.
Deposit date:2016-11-08
Release date:2017-05-24
Method:X-RAY DIFFRACTION (2.122 Å)
Cite:A cyclic GMP-dependent signalling pathway regulates bacterial phytopathogenesis
EMBO J., 32, 2013
5L0F
DownloadVisualize
BU of 5l0f by Molmil
Human metavinculin quadruple mutant (residues 959-1134)
Descriptor: GLYCEROL, Vinculin
Authors:Chinthalapudi, K, Izard, T.
Deposit date:2016-07-27
Release date:2016-08-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Differential lipid binding of vinculin isoforms promotes quasi-equivalent dimerization.
Proc.Natl.Acad.Sci.USA, 113, 2016
5L0G
DownloadVisualize
BU of 5l0g by Molmil
Human metavinculin MVt Q971R, R975D, T978R mutant (residues 959-1134) in complex with PIP2
Descriptor: Vinculin, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Chinthalapudi, K, Izard, T.
Deposit date:2016-07-27
Release date:2016-08-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Differential lipid binding of vinculin isoforms promotes quasi-equivalent dimerization.
Proc.Natl.Acad.Sci.USA, 113, 2016
1IDV
DownloadVisualize
BU of 1idv by Molmil
NMR structure of HCV ires RNA domain IIIC
Descriptor: HEPATITIS C IRES RNA DOMAIN IIIC
Authors:Kaluarachchi, K, Rijnbrand, R, Lemon, S.M, Gorenstein, D.G.
Deposit date:2001-04-05
Release date:2001-10-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Mutational and structural analysis of stem-loop IIIC of the hepatitis C virus and GB virus B internal ribosome entry sites
J.Mol.Biol., 343, 2004
5HTL
DownloadVisualize
BU of 5htl by Molmil
Structure of MshE with cdg
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MSHA biogenesis protein MshE
Authors:Chin, K.H, Wang, Y.C.
Deposit date:2016-01-27
Release date:2016-10-05
Last modified:2016-10-12
Method:X-RAY DIFFRACTION (1.371 Å)
Cite:Nucleotide binding by the widespread high-affinity cyclic di-GMP receptor MshEN domain.
Nat Commun, 7, 2016
1VDB
DownloadVisualize
BU of 1vdb by Molmil
NMR structure of FMBP-1 tandem repeat 1 in 30%(v/v) TFE solution
Descriptor: Fibroin-modulator-binding-protein-1
Authors:Kawaguchi, K, Yamaki, T, Aizawa, T, Takiya, S, Demura, M, Nitta, K.
Deposit date:2004-03-20
Release date:2005-03-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of FMBP-1 tandem repeat 1 in 30%(v/v) TFE solution
To be Published
1VDA
DownloadVisualize
BU of 1vda by Molmil
Solution structure of FMBP-1 tandem repeat 4
Descriptor: Fibroin-modulator-binding-protein-1
Authors:Kawaguchi, K, Yamaki, T, Aizawa, T, Takiya, S, Demura, M, Nitta, K.
Deposit date:2004-03-20
Release date:2005-03-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of FMBP-1 tandem repeat 4
To be Published
5L0I
DownloadVisualize
BU of 5l0i by Molmil
Human metavinculin MVt R975W cardiomyopathy-associated mutant (residues 959-1134)
Descriptor: GLYCEROL, SODIUM ION, Vinculin
Authors:Chinthalapudi, K, Izard, T.
Deposit date:2016-07-27
Release date:2016-08-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Differential lipid binding of vinculin isoforms promotes quasi-equivalent dimerization.
Proc.Natl.Acad.Sci.USA, 113, 2016
1EF2
DownloadVisualize
BU of 1ef2 by Molmil
CRYSTAL STRUCTURE OF MANGANESE-SUBSTITUTED KLEBSIELLA AEROGENES UREASE
Descriptor: MANGANESE (II) ION, UREASE ALPHA SUBUNIT, UREASE BETA SUBUNIT, ...
Authors:Yamaguchi, K, Cosper, N.J, Stalhandske, C, Scott, R.A, Pearson, M.A, Karplus, P.A, Hausinger, R.P.
Deposit date:2000-02-05
Release date:2000-03-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Characterization of metal-substituted Klebsiella aerogenes urease.
J.Biol.Inorg.Chem., 4, 1999
5I4E
DownloadVisualize
BU of 5i4e by Molmil
Crystal Structure of Human Nonmuscle Myosin 2C motor domain
Descriptor: ADP ORTHOVANADATE, MAGNESIUM ION, Myosin-14,Alpha-actinin A
Authors:Chinthalapudi, K, Heissler, S.M, Preller, M, Sellers, J.R, Manstein, D.J.
Deposit date:2016-02-11
Release date:2017-09-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mechanistic insights into the active site and allosteric communication pathways in human nonmuscle myosin-2C.
Elife, 6, 2017
5L0H
DownloadVisualize
BU of 5l0h by Molmil
Human metavinculin MVt cardiomyopathy-associated mutant R975W (residues 959-1134) in complex with PIP2
Descriptor: DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, Vinculin, ...
Authors:Chinthalapudi, K, Izard, T.
Deposit date:2016-07-27
Release date:2016-08-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Differential lipid binding of vinculin isoforms promotes quasi-equivalent dimerization.
Proc.Natl.Acad.Sci.USA, 113, 2016

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon