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PDB: 913 results

2X2D
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BU of 2x2d by Molmil
acetyl-CypA:HIV-1 N-term capsid domain complex
Descriptor: CAPSID PROTEIN P24, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A
Authors:Lammers, M, Neumann, H, Chin, J.W, James, L.C.
Deposit date:2010-01-12
Release date:2010-03-23
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Acetylation Regulates Cyclophilin a Catalysis, Immunosuppression and HIV Isomerisation
Nat.Chem.Biol., 6, 2010
1NCP
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BU of 1ncp by Molmil
STRUCTURAL CHARACTERIZATION OF A 39 RESIDUE SYNTHETIC PEPTIDE CONTAINING THE TWO ZINC BINDING DOMAINS FROM THE HIV-1 P7 NUCLEOCAPSID PROTEIN BY CD AND NMR SPECTROSCOPY
Descriptor: HIV-1 P7 NUCLEOCAPSID PROTEIN, ZINC ION
Authors:Clore, G.M, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1991-11-27
Release date:1993-10-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural characterization of a 39-residue synthetic peptide containing the two zinc binding domains from the HIV-1 p7 nucleocapsid protein by CD and NMR spectroscopy.
FEBS Lett., 292, 1991
3PMZ
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BU of 3pmz by Molmil
Crystal Structure of the Complex of Acetylcholine Binding Protein and d-tubocurarine
Descriptor: (1beta,1'alpha)-7',12'-dihydroxy-6,6'-dimethoxy-2,2',2'-trimethyltubocuraran-2'-ium, MAGNESIUM ION, Soluble acetylcholine receptor
Authors:Talley, T.T, Harel, M, Yamauchi, J.G, Radic, Z, Hansen, S, Huxford, T, Taylor, P.W.
Deposit date:2010-11-18
Release date:2011-10-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:The Curare Alkaloids: Analyzing the Poses of Complexes with the Acetylcholine Binding Protein in Relation to Structure and Binding Energies
To be Published
1X60
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BU of 1x60 by Molmil
Solution structure of the peptidoglycan binding domain of B. subtilis cell wall lytic enzyme CwlC
Descriptor: Sporulation-specific N-acetylmuramoyl-L-alanine amidase
Authors:Mishima, M, Shida, T, Yabuki, K, Kato, K, Sekiguchi, J, Kojima, C.
Deposit date:2005-05-17
Release date:2005-08-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the Peptidoglycan Binding Domain of Bacillus subtilis Cell Wall Lytic Enzyme CwlC: Characterization of the Sporulation-Related Repeats by NMR(,)
Biochemistry, 44, 2005
6HRM
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BU of 6hrm by Molmil
E. coli 70S d2d8 stapled ribosome
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Schmied, W.H, Tnimov, Z, Uttamapinant, C, Rae, C.D, Fried, S.D, Chin, J.W.
Deposit date:2018-09-27
Release date:2018-12-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Controlling orthogonal ribosome subunit interactions enables evolution of new function.
Nature, 564, 2018
7NZQ
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BU of 7nzq by Molmil
D-lyxose isomerase from the hyperthermophilic archaeon Thermofilum sp complexed with D-mannose
Descriptor: 1,2-ETHANEDIOL, D-lyxose/D-mannose family sugar isomerase, DI(HYDROXYETHYL)ETHER, ...
Authors:De Rose, S.A, Isupov, M.N, Littlechild, J.A, Schoenheit, P.
Deposit date:2021-03-24
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Biochemical and Structural Characterisation of a Novel D-Lyxose Isomerase From the Hyperthermophilic Archaeon Thermofilum sp.
Front Bioeng Biotechnol, 9, 2021
7OEX
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BU of 7oex by Molmil
Crystal structure of RBBP9 in complex with phenylalanine
Descriptor: PHENYLALANINE, Serine hydrolase RBBP9
Authors:Fiedler, M, Tang, S, Chin, J.W.
Deposit date:2021-05-04
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Mechanism-based traps enable protease and hydrolase substrate discovery.
Nature, 602, 2022
7OD2
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BU of 7od2 by Molmil
NMR structure of the Anemonia erythraea AeTX-K toxin
Descriptor: Kappa-actitoxin-Aer3a
Authors:Qasim, A, Qassem, N, Chill, J.H.
Deposit date:2021-04-28
Release date:2022-04-06
Method:SOLUTION NMR
Cite:Structural determination of AeTX-K by NMR
To Be Published
1S6L
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BU of 1s6l by Molmil
Solution structure of MerB, the Organomercurial Lyase involved in the bacterial mercury resistance system
Descriptor: Alkylmercury lyase
Authors:Di Lello, P, Benison, G.C, Valafar, H, Pitts, K.E, Summers, A.O, Legault, P, Omichinski, J.G.
Deposit date:2004-01-25
Release date:2005-04-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structural studies reveal a novel protein fold for MerB, the organomercurial lyase involved in the bacterial mercury resistance system.
Biochemistry, 43, 2004
5WJC
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BU of 5wjc by Molmil
Crystal structure of Schizosaccharomyces pombe Mis16 in complex with Eic1
Descriptor: Eic1 protein, Kinetochore protein Mis16
Authors:An, S, Cho, U.-S, Koldewey, P, Chik, J, Subramanian, L.
Deposit date:2017-07-21
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Mis16 Switches Function from a Histone H4 Chaperone to a CENP-ACnp1-Specific Assembly Factor through Eic1 Interaction.
Structure, 26, 2018
4IHD
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BU of 4ihd by Molmil
Crystal Structure of Uncleaved ThnT T282C, derivatized at the active site with EtHg
Descriptor: ETHYL MERCURY ION, ThnT protein
Authors:Buller, A.R, Schildbach, J.F, Townsend, C.A.
Deposit date:2012-12-18
Release date:2014-08-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Exploring the Role of Conformational Heterogeneity in cis-Autoproteolytic Activation of ThnT.
Biochemistry, 53, 2014
1QHB
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BU of 1qhb by Molmil
VANADIUM BROMOPEROXIDASE FROM RED ALGA CORALLINA OFFICINALIS
Descriptor: CALCIUM ION, HALOPEROXIDASE, PHOSPHATE ION
Authors:Isupov, M.N, Dalby, A.R, Brindley, A.A, Littlechild, J.A.
Deposit date:1999-05-11
Release date:2000-07-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of dodecameric vanadium-dependent bromoperoxidase from the red algae Corallina officinalis.
J.Mol.Biol., 299, 2000
3ZNF
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BU of 3znf by Molmil
HIGH-RESOLUTION THREE-DIMENSIONAL STRUCTURE OF A SINGLE ZINC FINGER FROM A HUMAN ENHANCER BINDING PROTEIN IN SOLUTION
Descriptor: ZINC FINGER, ZINC ION
Authors:Gronenborn, A.M, Clore, G.M, Omichinski, J.G.
Deposit date:1990-07-09
Release date:1992-01-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:High-resolution three-dimensional structure of a single zinc finger from a human enhancer binding protein in solution.
Biochemistry, 29, 1990
1QHF
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BU of 1qhf by Molmil
YEAST PHOSPHOGLYCERATE MUTASE-3PG COMPLEX STRUCTURE TO 1.7 A
Descriptor: 3-PHOSPHOGLYCERIC ACID, PROTEIN (PHOSPHOGLYCERATE MUTASE), SULFATE ION
Authors:Crowhurst, G, Littlechild, J, Watson, H.C.
Deposit date:1999-05-13
Release date:1999-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a phosphoglycerate mutase:3-phosphoglyceric acid complex at 1.7 A.
Acta Crystallogr.,Sect.D, 55, 1999
1MGP
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BU of 1mgp by Molmil
Hypothetical protein TM841 from Thermotoga maritima reveals fatty acid binding function
Descriptor: Hypothetical protein TM841, PALMITIC ACID
Authors:Schulze-Gahmen, U, Pelaschier, J, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-08-15
Release date:2002-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a hypothetical protein, TM841 of Thermotoga maritima, reveals its function as fatty acid binding protein
Proteins, 50, 2003
4IHE
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BU of 4ihe by Molmil
Crystal Structure of Uncleaved ThnT T282A
Descriptor: ThnT protein
Authors:Buller, A.R, Schildbach, J.F, Townsend, C.A.
Deposit date:2012-12-18
Release date:2014-08-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Exploring the Role of Conformational Heterogeneity in cis-Autoproteolytic Activation of ThnT.
Biochemistry, 53, 2014
3NTT
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BU of 3ntt by Molmil
Structural insights of Adeno-Associated virus 5. A gene therapy Vector for Cystic Fibrosis
Descriptor: Capsid protein, GLYCEROL, SODIUM ION
Authors:Govindasamy, L, DiMattia, M, Chiorini, J.A, McKenna, R, Muzyczka, N, Agbandje-McKenna, M.
Deposit date:2010-07-05
Release date:2011-12-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structural insights into adeno-associated virus serotype 5.
J.Virol., 87, 2013
4CV2
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BU of 4cv2 by Molmil
Crystal structure of E. coli FabI in complex with NADH and CG400549
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 1-(3-amino-2-methylbenzyl)-4-[2-(thiophen-2-yl)ethoxy]pyridin-2(1H)-one, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]
Authors:Tareilus, M, Schiebel, J, Chang, A, Shah, S, Tonge, P.J, Kisker, C.
Deposit date:2014-03-22
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rational Design of Broad Spectrum Antibacterial Activity Based on a Clinically Relevant Enoyl-Acyl Carrier Protein (Acp) Reductase Inhibitor.
J.Biol.Chem., 289, 2014
4ALD
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BU of 4ald by Molmil
HUMAN MUSCLE FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE COMPLEXED WITH FRUCTOSE 1,6-BISPHOSPHATE
Descriptor: 1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM), FRUCTOSE-BISPHOSPHATE ALDOLASE
Authors:Dalby, A.R, Dauter, Z, Littlechild, J.A.
Deposit date:1998-07-26
Release date:1999-03-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of human muscle aldolase complexed with fructose 1,6-bisphosphate: mechanistic implications.
Protein Sci., 8, 1999
5Y5N
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BU of 5y5n by Molmil
Crystal structure of human Sirtuin 2 in complex with a selective inhibitor
Descriptor: 2-[[3-(2-phenylethoxy)phenyl]amino]benzamide, NAD-dependent protein deacetylase sirtuin-2, ZINC ION
Authors:Mellini, P, Itoh, Y, Tsumoto, H, Li, Y, Suzuki, M, Tokuda, N, Kakizawa, T, Miura, Y, Takeuchi, J, Lahtela-Kakkonen, M, Suzuki, T.
Deposit date:2017-08-09
Release date:2017-09-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Potent mechanism-based sirtuin-2-selective inhibition by anin situ-generated occupant of the substrate-binding site, "selectivity pocket" and NAD+-binding site.
Chem Sci, 8, 2017
1QMV
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BU of 1qmv by Molmil
thioredoxin peroxidase B from red blood cells
Descriptor: PEROXIREDOXIN-2
Authors:Isupov, M.N, Littlechild, J.A, Lebedev, A.A, Errington, N, Vagin, A.A, Schroder, E.
Deposit date:1999-10-07
Release date:2000-07-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Decameric 2-Cys Peroxiredoxin from Human Erythrocytes at 1.7 A Resolution.
Structure, 8, 2000
4B8N
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BU of 4b8n by Molmil
Cytochrome b5 of Ostreococcus tauri virus 2
Descriptor: CYTOCHROME B5-HOST ORIGIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Isupov, M, Reid, E.L, Weynberg, K.D, Love, J, Wilson, W.H, Kelly, S.L, Lamb, D.C, Allen, M.J, Littlechild, J.A.
Deposit date:2012-08-28
Release date:2013-09-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Functional and Structural Characterisation of a Viral Cytochrome B5.
FEBS Lett., 587, 2013
5YGV
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BU of 5ygv by Molmil
Crystal structure of the abscisic acid receptor PYR1 in complex with an antagonist
Descriptor: (2Z,4E)-3-methyl-5-[(1S,4S)-2,6,6-trimethyl-4-[3-(4-methylphenyl)prop-2-ynoxy]-1-oxidanyl-cyclohex-2-en-1-yl]penta-2,4-dienoic acid, Abscisic acid receptor PYR1
Authors:Akiyama, T, Sue, M, Takeuchi, J, Mimura, N, Okamoto, M, Monda, K, Iba, K, Ohnishi, T, Todoroki, Y, Yajima, S.
Deposit date:2017-09-27
Release date:2018-04-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Chemical Design of Abscisic Acid Antagonists That Block PYL-PP2C Receptor Interactions.
ACS Chem. Biol., 13, 2018
6ICJ
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BU of 6icj by Molmil
Crystal structure of PPARgamma with compound BR102375K
Descriptor: 2-butyl-5-[(3-tert-butyl-1,2,4-oxadiazol-5-yl)methyl]-6-methyl-3-{[2'-(5-oxo-4,5-dihydro-1,2,4-oxadiazol-3-yl)[1,1'-biphenyl]-4-yl]methyl}pyrimidin-4(3H)-one, GLYCEROL, Nuclear receptor coactivator 1, ...
Authors:Hong, E, Chin, J, Jang, T.H, Kim, K.H, Jung, W, Kim, S.H.
Deposit date:2018-09-06
Release date:2019-09-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.483 Å)
Cite:Crystal structure of PPARgamma with compound BR102375K
To Be Published
4CMD
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BU of 4cmd by Molmil
The (R)-selective transaminase from Nectria haematococca
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Sayer, C, Isupov, M, Martinez-Torres, R.J, Richter, N, Hailes, H.C, Ward, J, Littlechild, J.
Deposit date:2014-01-16
Release date:2014-03-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The Substrate Specificity, Enantioselectivity and Structure of the (R)-Selective Amine:Pyruvate Transaminase from Nectria Haematococca.
FEBS J., 281, 2014

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