Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1008 results

4QDK
DownloadVisualize
BU of 4qdk by Molmil
Crystal structure of magnesium protoporphyrin IX methyltransferase (ChlM) from Synechocystis PCC 6803 with bound SAH
Descriptor: GLYCEROL, Magnesium-protoporphyrin O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Chen, X, Wang, X, Liu, L.
Deposit date:2014-05-14
Release date:2014-08-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into the catalytic mechanism of Synechocystis magnesium protoporphyrin IX O-methyltransferase (ChlM).
J.Biol.Chem., 289, 2014
4ZD3
DownloadVisualize
BU of 4zd3 by Molmil
Structure of a transglutaminase 2-specific autoantibody Fab fragment
Descriptor: 679-14-14E06 Fab fragment heavy chain, 679-14-14E06 Fab fragment light chain
Authors:Chen, X, Dalhus, B, Hnida, K, Iversen, R, Sollid, L.M.
Deposit date:2015-04-16
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Antigen Recognition by Transglutaminase 2-specific Autoantibodies in Celiac Disease.
J.Biol.Chem., 290, 2015
7K1J
DownloadVisualize
BU of 7k1j by Molmil
CryoEM structure of inactivated-form DNA-PK (Complex III)
Descriptor: DNA (5'-D(*AP*AP*GP*CP*AP*GP*TP*AP*GP*AP*GP*CP*A)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*TP*CP*TP*AP*CP*TP*GP*CP*TP*TP*CP*GP*AP*TP*AP*TP*CP*G)-3'), DNA-dependent protein kinase catalytic subunit, ...
Authors:Chen, X, Gellert, M, Yang, W.
Deposit date:2020-09-07
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of an activated DNA-PK and its implications for NHEJ.
Mol.Cell, 81, 2021
7K1N
DownloadVisualize
BU of 7k1n by Molmil
CryoEM structure of inactivated-form DNA-PK (Complex V)
Descriptor: DNA (5'-D(P*AP*AP*GP*CP*AP*GP*TP*AP*GP*AP*GP*CP*A)-3'), DNA (5'-D(P*GP*CP*AP*TP*GP*CP*TP*CP*TP*AP*CP*TP*GP*CP*TP*TP*CP*GP*AP*TP*AP*TP*CP*G)-3'), DNA-dependent protein kinase catalytic subunit, ...
Authors:Chen, X, Gellert, M, Yang, W.
Deposit date:2020-09-08
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of an activated DNA-PK and its implications for NHEJ.
Mol.Cell, 81, 2021
5W1X
DownloadVisualize
BU of 5w1x by Molmil
Crystal Structure of Humanpapillomavirus18 (HPV18) Capsid L1 Pentamers Bound to Heparin Oligosaccharides
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose, 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose, 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose, ...
Authors:Chen, X.S, Dasgupta, J.
Deposit date:2017-06-05
Release date:2018-12-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.374 Å)
Cite:Structural basis of oligosaccharide receptor recognition by human papillomavirus.
J. Biol. Chem., 286, 2011
3DR9
DownloadVisualize
BU of 3dr9 by Molmil
Increased Distal Histidine Conformational Flexibility in the Deoxy Form of Dehaloperoxidase from Amphitrite ornata
Descriptor: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Chen, X, de Serrano, V.S, Betts, L, Franzen, S.
Deposit date:2008-07-10
Release date:2009-01-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Distal histidine conformational flexibility in dehaloperoxidase from Amphitrite ornata.
Acta Crystallogr.,Sect.D, 65, 2009
3FUS
DownloadVisualize
BU of 3fus by Molmil
Improved Structure of the Unliganded Simian Immunodeficiency Virus gp120 Core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chen, X, Poon, B, Wang, Q, Ma, J.
Deposit date:2009-01-14
Release date:2009-06-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural improvement of unliganded simian immunodeficiency virus gp120 core by normal-mode-based X-ray crystallographic refinement.
Acta Crystallogr.,Sect.D, 65, 2009
8QH2
DownloadVisualize
BU of 8qh2 by Molmil
Crystal structure of chimeric UAP1L1
Descriptor: UDP-N-acetylhexosamine pyrophosphorylase,UDP-N-acetylhexosamine pyrophosphorylase-like protein 1
Authors:Chen, X, Yan, K, Bartual, S, van Aalten, D.
Deposit date:2023-09-06
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:UAP1L1 is an active pyrophosphorylase with an active site disulfide regulating protein thermostability
To Be Published
4ZHJ
DownloadVisualize
BU of 4zhj by Molmil
Crystal Structure of the Catalytic Subunit of Magnesium Chelatase
Descriptor: Mg-chelatase subunit ChlH
Authors:Chen, X, Pu, H, Fang, Y, Liu, L.
Deposit date:2015-04-25
Release date:2015-08-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Crystal structure of the catalytic subunit of magnesium chelatase
Nat.Plants, 1, 2015
2NBV
DownloadVisualize
BU of 2nbv by Molmil
Solution structure of the Rpn13 Pru domain engaging the hPLIC2 UBL domain
Descriptor: Proteasomal ubiquitin receptor ADRM1, Ubiquilin-2
Authors:Chen, X, Walters, K.J.
Deposit date:2016-03-12
Release date:2016-07-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome.
Structure, 24, 2016
2N3T
DownloadVisualize
BU of 2n3t by Molmil
Solution structure of the Rpn1 substrate receptor site toroid 1 (T1)
Descriptor: 26S proteasome regulatory subunit RPN1
Authors:Chen, X, Walters, K.J.
Deposit date:2015-06-10
Release date:2016-02-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016
2N3W
DownloadVisualize
BU of 2n3w by Molmil
Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the contracted binding mode
Descriptor: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40
Authors:Chen, X, Walters, K.J.
Deposit date:2015-06-10
Release date:2016-02-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016
474D
DownloadVisualize
BU of 474d by Molmil
A NOVEL END-TO-END BINDING OF TWO NETROPSINS TO THE DNA DECAMER D(CCCCCIIIII)2
Descriptor: DNA (5'-D(*CP*CP*CP*(CBR)P*CP*IP*IP*IP*IP*I)-3'), NETROPSIN
Authors:Chen, X, Rao, S.T, Sekar, K, Sundaralingam, M.
Deposit date:1998-01-14
Release date:1998-12-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A novel end-to-end binding of two netropsins to the DNA decamers d(CCCCCIIIII)2, d(CCCBr5CCIIIII)2and d(CBr5CCCCIIIII)2.
Nucleic Acids Res., 26, 1998
2NBW
DownloadVisualize
BU of 2nbw by Molmil
Solution structure of the Rpn1 T1 site with the Rad23 UBL domain
Descriptor: 26S proteasome regulatory subunit RPN1, UV excision repair protein RAD23
Authors:Chen, X, Walters, K.J.
Deposit date:2016-03-14
Release date:2016-07-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome.
Structure, 24, 2016
2N3V
DownloadVisualize
BU of 2n3v by Molmil
Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the extended binding mode
Descriptor: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40
Authors:Chen, X, Walters, K.J.
Deposit date:2015-06-10
Release date:2016-02-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016
2NBU
DownloadVisualize
BU of 2nbu by Molmil
Solution structure of the Rad23 ubiquitin-like (UBL) domain
Descriptor: UV excision repair protein RAD23
Authors:Chen, X, Walters, K.J.
Deposit date:2016-03-12
Release date:2016-07-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome.
Structure, 24, 2016
2KQZ
DownloadVisualize
BU of 2kqz by Molmil
Solution structure of the Rpn13 DEUBAD domain
Descriptor: Proteasomal ubiquitin receptor ADRM1
Authors:Chen, X, Lee, B, Finley, D, Walters, K.J.
Deposit date:2009-11-25
Release date:2010-05-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of Proteasome Ubiquitin Receptor hRpn13 and Its Activation by the Scaffolding Protein hRpn2.
Mol.Cell, 38, 2010
2KR0
DownloadVisualize
BU of 2kr0 by Molmil
Solution structure of the proteasome ubiquitin receptor Rpn13
Descriptor: Proteasomal ubiquitin receptor ADRM1
Authors:Chen, X, Lee, B, Finley, D, Walters, K.J.
Deposit date:2009-11-25
Release date:2010-05-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of Proteasome Ubiquitin Receptor hRpn13 and Its Activation by the Scaffolding Protein hRpn2.
Mol.Cell, 38, 2010
1CN3
DownloadVisualize
BU of 1cn3 by Molmil
INTERACTION OF POLYOMAVIRUS INTERNAL PROTEIN VP2 WITH MAJOR CAPSID PROTEIN VP1 AND IMPLICATIONS FOR PARTICIPATION OF VP2 IN VIRAL ENTRY
Descriptor: COAT PROTEIN VP1, FRAGMENT OF COAT PROTEIN VP2
Authors:Chen, X, Stehle, T, Harrison, S.C.
Deposit date:1999-05-24
Release date:1999-06-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Interaction of polyomavirus internal protein VP2 with the major capsid protein VP1 and implications for participation of VP2 in viral entry.
EMBO J., 17, 1998
2N3U
DownloadVisualize
BU of 2n3u by Molmil
Solution structure of the Rpn1 T1 site engaging two monoubiquitin molecules
Descriptor: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40
Authors:Chen, X, Walters, K.J.
Deposit date:2015-06-10
Release date:2016-02-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016
8KFO
DownloadVisualize
BU of 8kfo by Molmil
Crystal structure of BSA in complex with B3
Descriptor: 6-[(~{E})-2-[1-[2-[2-(2-methoxyethoxy)ethoxy]ethyl]pyridin-1-ium-4-yl]ethenyl]-~{N},~{N}-dimethyl-naphthalen-2-amine, Albumin
Authors:Chen, X, Ge, Y.H, Yang, H, Fang, B, Li, L.
Deposit date:2023-08-16
Release date:2024-08-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Bioinspired two-stage assembled photosensitive protein engineering for tumor-specific mitochondrial targeted phototherapy
To Be Published
6MUN
DownloadVisualize
BU of 6mun by Molmil
Structure of hRpn10 bound to UBQLN2 UBL
Descriptor: 26S proteasome non-ATPase regulatory subunit 4, Ubiquilin-2
Authors:Chen, X, Walters, K.J.
Deposit date:2018-10-23
Release date:2019-09-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of hRpn10 Bound to UBQLN2 UBL Illustrates Basis for Complementarity between Shuttle Factors and Substrates at the Proteasome.
J.Mol.Biol., 431, 2019
6OER
DownloadVisualize
BU of 6oer by Molmil
Cryo-EM structure of mouse RAG1/2 NFC complex (DNA2)
Descriptor: CALCIUM ION, DNA (46-MER), DNA (57-MER), ...
Authors:Chen, X, Cui, Y, Zhou, Z.H, Yang, W, Gellert, M.
Deposit date:2019-03-27
Release date:2020-01-29
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Cutting antiparallel DNA strands in a single active site.
Nat.Struct.Mol.Biol., 27, 2020
8WQ3
DownloadVisualize
BU of 8wq3 by Molmil
Crystal structure of the C-terminal RRM domain of an RBP
Descriptor: CHLORIDE ION, RNA-binding protein 45
Authors:Chen, X, Jiang, M, Yang, Z, Chen, X, Wei, Q, Guo, S, Wang, M.
Deposit date:2023-10-10
Release date:2024-08-21
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural basis for RNA recognition by the C-terminal RRM domain of human RBM45.
J.Biol.Chem., 300, 2024
8WQ5
DownloadVisualize
BU of 8wq5 by Molmil
Crystal structure of the C-terminal RRM domain of an RBP in complex with ssDNA
Descriptor: DNA (5'-D(*GP*AP*CP*GP*CP*AP*G)-3'), GLYCEROL, RNA-binding protein 45
Authors:Chen, X, Yang, Z, Chen, X, Wei, Q, Guo, S, Jiang, M, Wang, M.
Deposit date:2023-10-11
Release date:2024-08-21
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for RNA recognition by the C-terminal RRM domain of human RBM45.
J.Biol.Chem., 300, 2024

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon