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PDB: 543 results

4RWO
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Crystal structure of the porcine OAS1 L149R mutant in complex with dsRNA and ApCpp in the AMP donor position
Descriptor: 2'-5'-oligoadenylate synthase 1, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, ...
Authors:Lohoefener, J, Steinke, N, Kay-Fedorov, P, Baruch, P, Nikulin, A, Tishchenko, S, Manstein, D.J, Fedorov, R.
Deposit date:2014-12-05
Release date:2015-05-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Activation Mechanism of 2'-5'-Oligoadenylate Synthetase Gives New Insights Into OAS/cGAS Triggers of Innate Immunity.
Structure, 23, 2015
4IM6
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LRR domain from human NLRP1
Descriptor: GLYCEROL, NACHT, LRR and PYD domains-containing protein 1
Authors:Hahne, G, Reubold, T.F, Eschenburg, S.
Deposit date:2013-01-02
Release date:2014-01-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the leucine-rich repeat domain of the NOD-like receptor NLRP1: implications for binding of muramyl dipeptide.
Febs Lett., 588, 2014
4RWN
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Crystal structure of the pre-reactive state of porcine OAS1
Descriptor: 2'-5'-oligoadenylate synthase 1, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, ...
Authors:Lohoefener, J, Steinke, N, Kay-Fedorov, P, Baruch, P, Nikulin, A, Tishchenko, S, Manstein, D.J, Fedorov, R.
Deposit date:2014-12-05
Release date:2015-05-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Activation Mechanism of 2'-5'-Oligoadenylate Synthetase Gives New Insights Into OAS/cGAS Triggers of Innate Immunity.
Structure, 23, 2015
1DLG
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CRYSTAL STRUCTURE OF THE C115S ENTEROBACTER CLOACAE MURA IN THE UN-LIGANDED STATE
Descriptor: CYCLOHEXYLAMMONIUM ION, PHOSPHATE ION, UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE MURA
Authors:Schonbrunn, E, Eschenburg, S, Krekel, F, Luger, K, Amrhein, N.
Deposit date:1999-12-09
Release date:2000-04-12
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Role of the loop containing residue 115 in the induced-fit mechanism of the bacterial cell wall biosynthetic enzyme MurA.
Biochemistry, 39, 2000
1DK1
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DETAILED VIEW OF A KEY ELEMENT OF THE RIBOSOME ASSEMBLY: CRYSTAL STRUCTURE OF THE S15-RRNA COMPLEX
Descriptor: 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Nikulin, A, Serganov, A, Ennifar, E, Tischenko, S, Nevskaya, N.
Deposit date:1999-12-06
Release date:2000-04-02
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the S15-rRNA complex.
Nat.Struct.Biol., 7, 2000
4P2S
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BU of 4p2s by Molmil
Alanine Scanning Mutagenesis Identifies an Asparagine-Arginine-Lysine Triad Essential to Assembly of the Shell of the Pdu Microcompartment
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Putative propanediol utilization protein PduA, ...
Authors:Sinha, S, Cheng, S, Sung, Y.W, McNamara, D.E, Sawaya, M.R, Yeates, T.O, Bobik, T.A.
Deposit date:2014-03-03
Release date:2014-05-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Alanine Scanning Mutagenesis Identifies an Asparagine-Arginine-Lysine Triad Essential to Assembly of the Shell of the Pdu Microcompartment.
J.Mol.Biol., 426, 2014
4LQ4
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crystal structure of mutant ribosomal protein L1 from Methanococcus jannaschii with deletion of 8 residues from C-terminus
Descriptor: 50S ribosomal protein L1, CHLORIDE ION, ISOPROPYL ALCOHOL, ...
Authors:Gabdulkhakov, A.G, Tishchenko, S.V, Shkliaeva, A.A, Garber, M.B, Nikonov, S.V, Sarskikh, A.V.
Deposit date:2013-07-17
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of a mutant of archaeal ribosomal protein L1 from Methanococcus jannaschii
Crystallography Reports, 59, 2014
4E1V
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X-RAY Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with 5-Fluorouracil at 2.15 A Resolution
Descriptor: 1,2-ETHANEDIOL, 5-FLUOROURACIL, GLYCEROL, ...
Authors:Lashkov, A.A, Sotnichenko, S.E, Prokofev, I.I, Gabdoulkhakov, A.G, Mikhailov, A.M.
Deposit date:2012-03-07
Release date:2013-03-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:X-ray structure of Salmonella typhimurium uridine phosphorylase complexed with 5-fluorouracil and molecular modelling of the complex of 5-fluorouracil with uridine phosphorylase from Vibrio cholerae.
Acta Crystallogr.,Sect.D, 68, 2012
4H1T
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X-RAY Structure of the Complex VchUPh with Phosphate ion at 1.92A Resolution.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Sotnichenko, S.E, Betzel, C, Mikhailov, A.M.
Deposit date:2012-09-11
Release date:2013-09-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.924 Å)
Cite:X-RAY Structure of the Complex VchUPh with Phosphate ion at 1.92A Resolution.
TO BE PUBLISHED
1IC6
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STRUCTURE OF A SERINE PROTEASE PROTEINASE K FROM TRITIRACHIUM ALBUM LIMBER AT 0.98 A RESOLUTION
Descriptor: CALCIUM ION, NITRATE ION, PROTEINASE K
Authors:Betzel, C, Gourinath, S, Kumar, P, Kaur, P, Perbandt, M, Eschenburg, S, Singh, T.P.
Deposit date:2001-03-30
Release date:2001-04-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Structure of a serine protease proteinase K from Tritirachium album limber at 0.98 A resolution.
Biochemistry, 40, 2001
8QDO
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BU of 8qdo by Molmil
Crystal structure of the tegument protein UL82 (pp71) from Human Cytomegalovirus
Descriptor: Protein pp71, TETRAETHYLENE GLYCOL
Authors:Bresch, I.P, Eberhage, J, Reubold, T.F, Eschenburg, S.
Deposit date:2023-08-30
Release date:2024-02-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the tegument protein UL82 (pp71) from human cytomegalovirus.
Protein Sci., 33, 2024
2AKA
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BU of 2aka by Molmil
Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus
Descriptor: Dynamin-1, LINKER, myosin II heavy chain
Authors:Reubold, T.F, Eschenburg, S, Becker, A, Leonard, M, Schmid, S.L, Vallee, R.B, Kull, F.J, Manstein, D.J.
Deposit date:2005-08-03
Release date:2005-08-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the GTPase domain of rat dynamin 1.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1U63
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THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-mRNA COMPLEX
Descriptor: 49 NT FRAGMENT OF MRNA FOR L1, 50S ribosomal protein L1P
Authors:Nevskaya, N, Tishchenko, S, Gabdoulkhakov, A, Nikonova, E, Nikonov, O, Nikulin, A, Garber, M, Nikonov, S, Piendl, W.
Deposit date:2004-07-29
Release date:2005-04-12
Last modified:2016-11-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Ribosomal protein L1 recognizes the same specific structural motif in its target sites on the autoregulatory mRNA and 23S rRNA.
Nucleic Acids Res., 33, 2005
8P9U
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BU of 8p9u by Molmil
Crystal Structure of Two-Domain Laccase mutant M199A/D268N from Streptomyces griseoflavus
Descriptor: CALCIUM ION, COPPER (II) ION, OXYGEN MOLECULE, ...
Authors:Kolyadenko, I.A, Tishchenko, S.V, Gabdulkhakov, A.G.
Deposit date:2023-06-06
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insight into the Amino Acid Environment of the Two-Domain Laccase's Trinuclear Copper Cluster.
Int J Mol Sci, 24, 2023
8P9V
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BU of 8p9v by Molmil
Crystal Structure of Two-Domain Laccase mutant M199G/R240H/D268N from Streptomyces griseoflavus
Descriptor: COPPER (II) ION, OXYGEN MOLECULE, PEROXIDE ION, ...
Authors:Kolyadenko, I.A, Tishchenko, S.V, Gabdulkhakov, A.G.
Deposit date:2023-06-06
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insight into the Amino Acid Environment of the Two-Domain Laccase's Trinuclear Copper Cluster.
Int J Mol Sci, 24, 2023
1AOK
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BU of 1aok by Molmil
VIPOXIN COMPLEX
Descriptor: ACETATE ION, VIPOXIN COMPLEX
Authors:Perbandt, M, Wilson, J.C, Eschenburg, S, Betzel, C.
Deposit date:1997-07-07
Release date:1998-01-21
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of vipoxin at 2.0 A: an example of regulation of a toxic function generated by molecular evolution.
FEBS Lett., 412, 1997
4N8U
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Two-Domain Laccase from Streptomyces viridochromogenes at 2.4 A resolution AC629
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, COPPER (II) ION, ...
Authors:Gabdulkhakov, A, Tischenko, S, Yurevich, L, Lisov, A, Leontievsky, A.
Deposit date:2013-10-18
Release date:2014-10-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Two-Domain Laccase from Streptomyces viridochromogenes at 2.4 A resolution AC629
To be Published
4NB7
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Crystal Structure of Two-Domain Laccase from Streptomyces LIvidans AC1709 in complex with azide after 180 min soaking
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, AZIDE ION, ...
Authors:Gabdulkhakov, A, Tischenko, S, Yurevich, L, Lisov, A, Leontievsky, A.
Deposit date:2013-10-23
Release date:2014-10-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure of Two-Domain Laccase from Streptomyces Lividans AC1709 in complex with azide after 180 min soaking
To be Published
3C9X
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BU of 3c9x by Molmil
Crystal structure of Trichoderma reesei aspartic proteinase
Descriptor: GLYCEROL, Trichoderma reesei Aspartic protease
Authors:Nascimento, A.S, Krauchenco, S, Golubev, A.M, Gustchina, A, Wlodawer, A, Polikarpov, I.
Deposit date:2008-02-19
Release date:2008-08-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Statistical coupling analysis of aspartic proteinases based on crystal structures of the Trichoderma reesei enzyme and its complex with pepstatin A.
J.Mol.Biol., 382, 2008
8Q7Y
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BU of 8q7y by Molmil
ESIBD structure of beta-galactosidase
Descriptor: Beta-galactosidase
Authors:Esser, T, Boehning, J, Bharat, T.A.M, Rauschenbach, S.
Deposit date:2023-08-17
Release date:2024-01-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM of soft-landed beta-galactosidase: Gas-phase and native structures are remarkably similar.
Sci Adv, 10, 2024
4IGU
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BU of 4igu by Molmil
Crystal structure of the RGS domain of CG5036
Descriptor: 1,2-ETHANEDIOL, CG5036, CHLORIDE ION, ...
Authors:Gabdulkhakov, A, Tishchenko, S.
Deposit date:2012-12-18
Release date:2013-12-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Double suppression of the G alpha protein activity by RGS proteins
Mol.Cell, 53, 2014
4NAJ
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Crystal Structure of Two-Domain Laccase from Streptomyces Lividans AC1709 in complex with azide after 90 min soaking
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, AZIDE ION, ...
Authors:Gabdulkhakov, A, Tischenko, S, Yurevich, L, Lisov, A, Leontievsky, A.
Deposit date:2013-10-22
Release date:2014-10-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Two-Domain Laccase from Streptomyces Lividans AC1709 in complex with azide after 90 min soaking
To be Published
1L3P
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BU of 1l3p by Molmil
CRYSTAL STRUCTURE OF THE FUNCTIONAL DOMAIN OF THE MAJOR GRASS POLLEN ALLERGEN Phl p 5b
Descriptor: MAGNESIUM ION, PHOSPHATE ION, POLLEN ALLERGEN Phl p 5b
Authors:Rajashankar, K.R, Bufe, A, Weber, W, Eschenburg, S, Lindner, B, Betzel, C.
Deposit date:2002-02-28
Release date:2003-02-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure of the functional domain of the major grass-pollen allergen Phlp 5b.
Acta Crystallogr.,Sect.D, 58, 2002
4GYB
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BU of 4gyb by Molmil
Two-domain laccase from streptomyces lividans at 2.4 A resolution AC1709
Descriptor: CHLORIDE ION, COPPER (II) ION, Copper oxidase, ...
Authors:Gabdulkhakov, A, Tischenko, S, Yurevich, L, Lisov, A, Leontievsky, A.
Deposit date:2012-09-05
Release date:2013-10-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Two-domain laccase from streptomyces lividans at 2.4 A resolution AC1709
To be Published
6HD3
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Common mode of remodeling AAA ATPases p97/CDC48 by their disassembly cofactors ASPL/PUX1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 48 homolog A, PHOSPHATE ION
Authors:Heinemann, U, Roske, Y, Banchenko, S, Arumughan, A, Petrovic, S.
Deposit date:2018-08-17
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Common Mode of Remodeling AAA ATPases p97/CDC48 by Their Disassembling Cofactors ASPL/PUX1.
Structure, 27, 2019

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