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PDB: 53 件

4YFS
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Structure of the synthetic Duffy Binding Protein (DBP) antigen DEKnull relevant for malaria vaccine design
分子名称: Duffy receptor
著者Chen, E, Tolia, N.H.
登録日2015-02-25
公開日2015-03-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Analysis of the Synthetic Duffy Binding Protein (DBP) Antigen DEKnull Relevant for Plasmodium vivax Malaria Vaccine Design.
Plos Negl Trop Dis, 9, 2015
8D78
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BU of 8d78 by Molmil
Crystal structure of a Ba stabilized four-tetrad, parallel Tetrahymena thermophila telomeric G-quadruplex in complex with N-methyl mesoporphyrin IX
分子名称: BARIUM ION, DNA (5'-D(*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*G)-3'), N-METHYLMESOPORPHYRIN
著者Chen, E.V, Beseiso, D, Yatsunyk, L.A.
登録日2022-06-07
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Biophysical and structural characterization of telomeric G-quadruplexes from Tetrahymena thermophila in complex with N-Methyl Mesoporphyrin IX
To Be Published
8D79
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Crystal structure of a four-tetrad, parallel, and Na+ stabilized Tetrahymena thermophila telomeric G-quadruplex in complex with N-methyl mesoporphyrin IX
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*T)-3'), N-METHYLMESOPORPHYRIN, ...
著者Chen, E.V, Beseiso, D, Yatsunyk, L.A.
登録日2022-06-07
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Biophysical and structural characterization of telomeric G-quadruplexes from Tetrahymena thermophila in complex with N-Methyl Mesoporphyrin IX
To Be Published
8EBO
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Homopurine parallel G-quadruplex from human chromosome 7 stabilized by K+ ions
分子名称: COBALT (III) ION, DNA (5'-D(*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*AP*AP*AP*GP*GP*GP*GP*A)-3'), N-METHYLMESOPORPHYRIN, ...
著者Chen, E.V, Yatsunyk, L.A.
登録日2022-08-31
公開日2022-12-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Homopurine guanine-rich sequences in complex with N-methyl mesoporphyrin IX form parallel G-quadruplex dimers and display a unique symmetry tetrad.
Bioorg.Med.Chem., 77, 2022
4QEX
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BU of 4qex by Molmil
Crystal structure of PfEBA-175 RII in complex with a Fab fragment from inhibitory antibody R217
分子名称: Antibody Heavy Chain, Antibody Light Chain, Erythrocyte-binding antigen-175
著者Chen, E, Paing, M.M, Salinas, N, Sim, B.K, Tolia, N.H.
登録日2014-05-19
公開日2014-06-04
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Structural and Functional Basis for Inhibition of Erythrocyte Invasion by Antibodies that Target Plasmodium falciparum EBA-175.
Plos Pathog., 9, 2013
7YAT
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BU of 7yat by Molmil
CryoEM tetra protofilament structure of the hamster prion 108-144 fibril
分子名称: Major prion protein
著者Chen, E.H.-L, Kao, S.-W, Lee, C.-H, Huang, J.Y.C, Chen, R.P.-Y, Wu, K.-P.
登録日2022-06-28
公開日2022-07-27
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献2.2 angstrom Cryo-EM Tetra-Protofilament Structure of the Hamster Prion 108-144 Fibril Reveals an Ordered Water Channel in the Center.
J.Am.Chem.Soc., 144, 2022
5F3J
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BU of 5f3j by Molmil
Crystal structure of DBP in complex with inhibitory monoclonal antibody 2D10
分子名称: Antibody 2D10 single chain variable fragment, Duffy receptor
著者Chen, E, Salinas, N.D, Tolia, N.H.
登録日2015-12-02
公開日2016-05-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (4.001 Å)
主引用文献Broadly neutralizing epitopes in the Plasmodium vivax vaccine candidate Duffy Binding Protein.
Proc.Natl.Acad.Sci.USA, 113, 2016
4UUN
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BU of 4uun by Molmil
Trichomonas vaginalis lactate dehydrogenase in complex with NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, L-LACTATE DEHYDROGENASE
著者Steindel, P.A, Chen, E.H, Theobald, D.L.
登録日2014-07-29
公開日2015-08-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
4UUM
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BU of 4uum by Molmil
Apo trichomonas vaginalis lactate dehydrogenase
分子名称: L-LACTATE DEHYDROGENASE
著者Steindel, P.A, Chen, E.H, Theobald, D.L.
登録日2014-07-29
公開日2015-08-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.368 Å)
主引用文献Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
4UUO
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BU of 4uuo by Molmil
Apo Trichomonas vaginalis malate dehydrogenase
分子名称: CYTOSOLIC MALATE DEHYDROGENASE
著者Steindel, P.A, Chen, E.H, Theobald, D.L.
登録日2014-07-29
公開日2015-08-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.842 Å)
主引用文献Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
8WZX
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BU of 8wzx by Molmil
Cryo-EM structure of the hamster prion 23-144 fibril at pH 3.7
分子名称: Major prion protein
著者Lee, C.-H, Saw, J.-E, Chen, E, Wang, C.-H, Chen, R.
登録日2023-11-02
公開日2024-05-01
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献The Positively Charged Cluster in the N-terminal Disordered Region may Affect Prion Protein Misfolding: Cryo-EM Structure of Hamster PrP(23-144) Fibrils.
J.Mol.Biol., 436, 2024
4UUP
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BU of 4uup by Molmil
Reconstructed ancestral trichomonad malate dehydrogenase in complex with NADH, SO4, and PO4
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MALATE DEHYDROGENASE, PHOSPHATE ION, ...
著者Steindel, P.A, Chen, E.H, Theobald, D.L.
登録日2014-07-29
公開日2015-08-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.543 Å)
主引用文献Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
4UUL
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Apo trichomonas vaginalis lactate dehydrogenase L91R
分子名称: L-LACTATE DEHYDROGENASE
著者Steindel, P.A, Chen, E.H, L Theobald, D.
登録日2014-07-29
公開日2015-08-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
4YM4
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BU of 4ym4 by Molmil
Truncated Human TIFA in complex with its Thr9 phosphorylated N-terminal peptide 1-15
分子名称: TRAF-interacting protein with FHA domain-containing protein A
著者Weng, J.H, Wei, T.Y.W, Hsieh, Y.C, Huang, C.C.F, Wu, P.Y.G, Chen, E.S.W, Huang, K.F, Chen, C.J, Tsai, M.D.
登録日2015-03-06
公開日2015-10-21
最終更新日2015-10-28
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献Uncovering the Mechanism of Forkhead-Associated Domain-Mediated TIFA Oligomerization That Plays a Central Role in Immune Responses.
Biochemistry, 54, 2015
4ZGI
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BU of 4zgi by Molmil
Structure of Truncated Human TIFA
分子名称: TRAF-interacting protein with FHA domain-containing protein A
著者Weng, J.H, Wei, T.Y.W, Hsieh, Y.C, Huang, C.C.F, Wu, P.Y.G, Chen, E.S.W, Huang, K.F, Chen, C.J, Tsai, M.D.
登録日2015-04-23
公開日2015-10-14
最終更新日2015-10-28
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Uncovering the Mechanism of Forkhead-Associated Domain-Mediated TIFA Oligomerization That Plays a Central Role in Immune Responses.
Biochemistry, 54, 2015
5A1T
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BU of 5a1t by Molmil
Trichomonas vaginalis lactate dehydrogenase in complex with NADH and oxamate
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, L-LACTATE DEHYDROGENASE, OXAMIC ACID
著者Steindel, P.A, Chen, E.H, Theobald, D.L.
登録日2015-05-05
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
4V1N
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BU of 4v1n by Molmil
Architecture of the RNA polymerase II-Mediator core transcription initiation complex
分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
著者Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P.
登録日2014-09-29
公開日2015-02-04
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Architecture of the RNA Polymerase II-Mediator Core Initiation Complex.
Nature, 518, 2015
5JPE
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BU of 5jpe by Molmil
Yeast-specific serine/threonine protein phosphatase (PPZ1) of Candida albicans
分子名称: CITRATE ANION, GLYCEROL, Serine/threonine-protein phosphatase
著者Choy, M.S, Chen, E.H, Peti, W, Page, R.
登録日2016-05-03
公開日2016-08-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.611 Å)
主引用文献Molecular Insights into the Fungus-Specific Serine/Threonine Protein Phosphatase Z1 in Candida albicans.
Mbio, 7, 2016
5JPF
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BU of 5jpf by Molmil
Serine/Threonine phosphatase Z1 (Candida albicans) binds to inhibitor microcystin-LR
分子名称: MALONATE ION, MANGANESE (II) ION, Microcystin-LR, ...
著者Choy, M.S, Chen, E.H, Peti, W, Page, R.
登録日2016-05-03
公開日2016-08-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.39929724 Å)
主引用文献Molecular Insights into the Fungus-Specific Serine/Threonine Protein Phosphatase Z1 in Candida albicans.
Mbio, 7, 2016
7LL0
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BU of 7ll0 by Molmil
Crystal structure of a four-tetrad, parallel, and K+ stabilized Tetrahymena thermophila telomeric G-quadruplex
分子名称: 26-mer DNA, POTASSIUM ION
著者Yatsunyk, L.A, Chen, E.V.
登録日2021-02-03
公開日2021-07-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The first crystal structures of hybrid and parallel four-tetrad intramolecular G-quadruplexes.
Nucleic Acids Res., 50, 2022
7JLH
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BU of 7jlh by Molmil
Structure of Centromeric Satellite III Non-canonical Duplex
分子名称: ACETATE ION, DNA AATGG, MAGNESIUM ION
著者Yatsunyk, L.A, Chen, E.V.
登録日2020-07-29
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal Structure of 4-repeat Satellite III Sequence with Non-Canonical Base Interactions
To Be Published
4V1M
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BU of 4v1m by Molmil
Architecture of the RNA polymerase II-Mediator core transcription initiation complex
分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP)-3', 5'-D(*CP*CP*AP*GP*GP*AP)-3', 5'-D(*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*CP *CP*BRUP*GP*GP*TP*C)-3', ...
著者Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P.
登録日2014-09-29
公開日2015-02-04
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Architecture of the RNA Polymerase II-Mediator Core Initiation Complex.
Nature, 518, 2015
7JKU
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BU of 7jku by Molmil
Crystal structure of a four-tetrad, parallel, and K+ stabilized Tetrahymena thermophila telomeric G-quadruplex
分子名称: 26-mer DNA, POTASSIUM ION
著者Yatsunyk, L.A, McCarthy, S.E, Beseiso, D, Gallagher, E.P, Chen, E.V, Miao, J.
登録日2020-07-28
公開日2021-07-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献The first crystal structures of hybrid and parallel four-tetrad intramolecular G-quadruplexes.
Nucleic Acids Res., 50, 2022
7KLP
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Crystal structure of a three-tetrad, parallel, K+ stabilized human telomeric G-quadruplex
分子名称: HEXAETHYLENE GLYCOL, POTASSIUM ION, telomeric DNA
著者Yatsunyk, L.A, Li, K.S, Chen, E.V.
登録日2020-10-30
公開日2020-12-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Water spines and networks in G-quadruplex structures.
Nucleic Acids Res., 49, 2021
2O9X
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BU of 2o9x by Molmil
Crystal Structure Of A Putative Redox Enzyme Maturation Protein From Archaeoglobus Fulgidus
分子名称: Reductase, assembly protein
著者Kirillova, O, Chruszcz, M, Skarina, T, Gorodichtchenskaia, E, Cymborowski, M, Shumilin, I, Savchenko, A, Edwards, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2006-12-14
公開日2007-01-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献An extremely SAD case: structure of a putative redox-enzyme maturation protein from Archaeoglobus fulgidus at 3.4 A resolution.
Acta Crystallogr.,Sect.D, 63, 2007

 

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件を2024-09-04に公開中

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