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PDB: 32 件
7MJ0
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BU of 7mj0 by Molmil
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with adenosine monophosphate AMP
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase
著者Chatterjee, S, Rankin, J.A, Lagishetty, S, Hu, J, Hausinger, R.P.
登録日2021-04-19
公開日2021-09-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献The LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MJ2
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LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with Zn
分子名称: MAGNESIUM ION, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase, ZINC ION
著者Chatterjee, S, Rankin, J.A, Lagishetty, S, Hu, J, Hausinger, R.P.
登録日2021-04-19
公開日2021-09-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MJ1
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BU of 7mj1 by Molmil
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with NAD
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Chatterjee, S, Rankin, J.A, Lagishetty, S, Hu, J, Hausinger, R.P.
登録日2021-04-19
公開日2021-09-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.402 Å)
主引用文献The LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LDK
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BU of 7ldk by Molmil
Structure of human respiratory syncytial virus nonstructural protein 2 (NS2)
分子名称: CHLORIDE ION, D(-)-TARTARIC ACID, Non-structural protein 2
著者Chatterjee, S, Borek, D, Otwinowski, Z, Amarasinghe, G.K, Leung, D.W.
登録日2021-01-13
公開日2021-03-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Structural basis for IFN antagonism by human respiratory syncytial virus nonstructural protein 2.
Proc.Natl.Acad.Sci.USA, 118, 2021
6KRB
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BU of 6krb by Molmil
High resolution crystal structure of an Acylphosphatase protein cage
分子名称: Acylphosphatase, GLYCEROL, SULFATE ION
著者Chatterjee, S, Nath, S, Sen, U.
登録日2019-08-21
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.375 Å)
主引用文献High resolution structure of Vibrio cholerae acylphosphatase (VcAcP) cage: Identification of drugs, location of its binding site and engineering to facilitate cage formation.
Biochem.Biophys.Res.Commun., 523, 2020
8UC2
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BU of 8uc2 by Molmil
Ethylene forming enzyme (EFE) R171A variant in complex with nickel and Benzoic acid
分子名称: 1,2-ETHANEDIOL, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, BENZOIC ACID, ...
著者Chatterjee, S, Rankin, J.A, Hu, J, Hausinger, R.
登録日2023-09-25
公開日2023-10-04
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural, Spectroscopic, and Computational Insights from Canavanine-Bound and Two Catalytically Compromised Variants of the Ethylene-Forming Enzyme.
Biochemistry, 63, 2024
3NZZ
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BU of 3nzz by Molmil
Crystal Structure of the Salmonella Type III Secretion System Tip Protein SipD
分子名称: Cell invasion protein sipD, NICKEL (II) ION
著者Chatterjee, S, Zhong, D, Nordhues, B.A, Battaile, K.P, Lovell, S, DeGuzman, R.N.
登録日2010-07-18
公開日2010-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The crystal structures of the Salmonella type III secretion system tip protein SipD in complex with deoxycholate and chenodeoxycholate.
Protein Sci., 20, 2011
3O00
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Crystal Structure of the Salmonella Type III Secretion System Tip Protein SipD-C244S
分子名称: Cell invasion protein sipD, NICKEL (II) ION
著者Chatterjee, S, Zhong, D, Nordhues, B.A, Battaile, K.P, Lovell, S, DeGuzman, R.N.
登録日2010-07-18
公開日2010-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The crystal structures of the Salmonella type III secretion system tip protein SipD in complex with deoxycholate and chenodeoxycholate.
Protein Sci., 20, 2011
3O02
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BU of 3o02 by Molmil
The Crystal Structure of the Salmonella Type III Secretion System Tip Protein SipD in Complex with Chenodeoxycholate
分子名称: CHENODEOXYCHOLIC ACID, Cell invasion protein sipD, NICKEL (II) ION
著者Chatterjee, S, Zhong, D, Nordhues, B.A, Battaile, K.P, Lovell, S, DeGuzman, R.N.
登録日2010-07-18
公開日2010-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structures of the Salmonella type III secretion system tip protein SipD in complex with deoxycholate and chenodeoxycholate.
Protein Sci., 20, 2011
3O01
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BU of 3o01 by Molmil
The Crystal Structure of the Salmonella Type III Secretion System Tip Protein SipD in Complex with Deoxycholate
分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, Cell invasion protein sipD, NICKEL (II) ION
著者Chatterjee, S, Zhong, D, Nordhues, B.A, Battaile, K.P, Lovell, S, DeGuzman, R.N.
登録日2010-07-18
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structures of the Salmonella type III secretion system tip protein SipD in complex with deoxycholate and chenodeoxycholate.
Protein Sci., 20, 2011
5Z3M
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BU of 5z3m by Molmil
Crystal structure of Low Molecular Weight Phosphotyrosine phosphatase (VcLMWPTP-2) from Vibrio choleraeO395
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, GLYCEROL, Phosphotyrosine protein phosphatase, ...
著者Chatterjee, S, Nath, S, Sen, U.
登録日2018-01-08
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Vibrio cholerae LMWPTP-2 display unique surface charge and grooves around the active site: Indicative of distinctive substrate specificity and scope to design specific inhibitor.
Biochim Biophys Acta Proteins Proteom, 1867, 2019
8STD
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BU of 8std by Molmil
S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with authentic substrate NaAD and soaked with CS2
分子名称: MAGNESIUM ION, NICOTINIC ACID ADENINE DINUCLEOTIDE, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase
著者Chatterjee, S, Rankin, J.A, Hu, J, Hausinger, R.P.
登録日2023-05-10
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure of the LarB-Substrate Complex and Identification of a Reaction Intermediate during Nickel-Pincer Nucleotide Cofactor Biosynthesis.
Biochemistry, 62, 2023
5YGG
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BU of 5ygg by Molmil
Crystal structure of Fructokinase Double-Mutant (T261C-H108C) from Vibrio cholerae O395 in fructose, ADP and potassium ion bound form
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Fructokinase, ...
著者Chatterjee, S, Paul, R, Nath, S, Sen, U.
登録日2017-09-22
公開日2018-09-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.671 Å)
主引用文献Large-scale conformational changes and redistribution of surface negative charge upon sugar binding dictate the fidelity of phosphorylation in Vibrio cholerae fructokinase.
Sci Rep, 8, 2018
8SOQ
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BU of 8soq by Molmil
S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with authentic substrate NaAD
分子名称: MAGNESIUM ION, NICOTINIC ACID ADENINE DINUCLEOTIDE, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase
著者Chatterjee, S, Rankin, J.A, Hu, J, Hausinger, R.P.
登録日2023-04-29
公開日2023-12-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the LarB-Substrate Complex and Identification of a Reaction Intermediate during Nickel-Pincer Nucleotide Cofactor Biosynthesis.
Biochemistry, 62, 2023
4YEC
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BU of 4yec by Molmil
Crystal structure of a clostripain (PARMER_00083) from Parabacteroides merdae ATCC 43184 in complex with peptide inhibitor Ac-VLTK-AOMK
分子名称: Clostripain family, Peptide inhibitor Ac-VLTK-AOMK
著者Wolan, D.W, Gonzalez-Paez, G.E, Chatterjee, S.
登録日2015-02-24
公開日2016-03-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Substrate Profiling and High Resolution Co-complex Crystal Structure of a Secreted C11 Protease Conserved across Commensal Bacteria.
ACS Chem. Biol., 12, 2017
8CVI
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BU of 8cvi by Molmil
Cryo-EM structure of the supercoiled EPEC H6 flagellar filament core Curly I waveform
分子名称: Flagellin
著者Kreutzberger, M.A, Chatterjee, S, Frankel, G, Egelman, E.H.
登録日2022-05-18
公開日2022-09-07
最終更新日2022-09-28
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Convergent evolution in the supercoiling of prokaryotic flagellar filaments.
Cell, 185, 2022
8CYE
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BU of 8cye by Molmil
Cryo-EM asymmetric reconstruction of the EPEC H6 bacterial flagellar filament Normal Waveform
分子名称: Flagellin
著者Kreutzberger, M.A.B, Chatterjee, S, Frankel, G, Egelman, E.H.
登録日2022-05-23
公開日2022-09-07
最終更新日2022-09-28
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Convergent evolution in the supercoiling of prokaryotic flagellar filaments.
Cell, 185, 2022
7FDS
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BU of 7fds by Molmil
High resolution crystal structure of LpqH from Mycobacterium tuberculosis
分子名称: Lipoprotein LpqH
著者Kundapura, S.V, Chatterjee, S, Samanta, D, Ramagopal, U.A.
登録日2021-07-17
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.258 Å)
主引用文献High-resolution crystal structure of LpqH, an immunomodulatory surface lipoprotein of Mycobacterium tuberculosis reveals a distinct fold and a conserved cleft on its surface.
Int.J.Biol.Macromol., 210, 2022
5B81
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BU of 5b81 by Molmil
Solution NMR structure of a 16-mer DNA duplex containing quadruple GC mismatches showing staggered base pairing, and consequent rescue of canonical double helical characteristics
分子名称: DNA (5'-D(*CP*GP*CP*GP*TP*AP*CP*GP*CP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*CP*AP*TP*GP*CP*GP*CP*TP*AP*CP*GP*CP*G)-3')
著者De, M, Chatterjee, S.
登録日2016-06-11
公開日2016-06-29
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR structure of a 16-mer DNA duplex containing quadruple GC mismatches showing staggered base pairing, and consequent rescue of canonical double helical characteristics
To Be Published
7SN7
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BU of 7sn7 by Molmil
Cryo-EM structure of the enteropathogenic E. coli O127:H6 flagellar filament
分子名称: Flagellin
著者Kreutzberger, M.A.B, Chatterjee, S, Frankel, G, Egelman, E.H.
登録日2021-10-27
公開日2022-03-16
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022
2MD4
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BU of 2md4 by Molmil
Fragment based approach and binding behavior of LFampinB with Lipopolysaccharide: biophysical aspects
分子名称: Lactotransferrin
著者Bhunia, A, Chatterjee, S, Ghosh, A, Jana, J.
登録日2013-08-29
公開日2013-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sequence context induced antimicrobial activity: insight into lipopolysaccharide permeabilization.
Mol Biosyst, 10, 2014
2MD1
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BU of 2md1 by Molmil
Fragment based approach and binding behavior of LFampinB with Lipopolysaccharide:biophysical aspects
分子名称: Lactotransferrin
著者Bhunia, A, Chatterjee, S, Ghosh, A, Jana, J.
登録日2013-08-29
公開日2013-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sequence context induced antimicrobial activity: insight into lipopolysaccharide permeabilization.
Mol Biosyst, 10, 2014
2MD2
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BU of 2md2 by Molmil
Fragment based approach and binding behavior of LFampinB with Lipopolysaccharide: biophysical aspects
分子名称: Lactotransferrin
著者Bhunia, A, Chatterjee, S, Ghosh, A, Jana, J.
登録日2013-08-29
公開日2013-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sequence context induced antimicrobial activity: insight into lipopolysaccharide permeabilization.
Mol Biosyst, 10, 2014
2MD3
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BU of 2md3 by Molmil
Fragment based approach and binding behavior of LFampinB with Lipopolysaccharide:biophysical aspects
分子名称: Lactotransferrin
著者Bhunia, A, Chatterjee, S, Ghosh, A, Jana, J.
登録日2013-08-29
公開日2013-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sequence context induced antimicrobial activity: insight into lipopolysaccharide permeabilization.
Mol Biosyst, 10, 2014
5WDK
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A processive dipeptidyl aminopeptidase secreted from an established commensal bacterium P. distasonis
分子名称: 5-[(3aS,4R,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-N-(2-oxopropyl)pentanamide, Aminopeptidase C, POTASSIUM ION
著者Wolan, D.W, Xu, J.H, Solania, A, Chatterjee, S, Jiang, Z, ODonoghue, A.J.
登録日2017-07-05
公開日2018-07-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献A Commensal Dipeptidyl Aminopeptidase with Specificity for N-Terminal Glycine Degrades Human-Produced Antimicrobial Peptides in Vitro.
Acs Chem.Biol., 13, 2018

 

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