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PDB: 281 results

6XGY
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BU of 6xgy by Molmil
Crystal structure of E. coli MlaFB ABC transport subunits in the dimeric state
Descriptor: ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Chang, Y, Bhabha, G, Ekiert, D.C.
Deposit date:2020-06-18
Release date:2020-07-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of MlaFB uncovers novel mechanisms of ABC transporter regulation.
Elife, 9, 2020
2ZUB
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BU of 2zub by Molmil
Left handed RadA
Descriptor: DNA repair and recombination protein radA
Authors:Chang, Y.W, Ko, T.P, Wang, T.F, Wang, A.H.J.
Deposit date:2008-10-15
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Three new structures of left-handed RADA helical filaments: structural flexibility of N-terminal domain is critical for recombinase activity
Plos One, 4, 2009
7YSI
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BU of 7ysi by Molmil
Crystal structure of thioredoxin 2
Descriptor: Thiol disulfide reductase thioredoxin, ZINC ION
Authors:Chang, Y.J, Park, H.H.
Deposit date:2022-08-12
Release date:2023-03-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.202 Å)
Cite:Comparison of the structure and activity of thioredoxin 2 and thioredoxin 1 from Acinetobacter baumannii.
Iucrj, 10, 2023
8K1T
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BU of 8k1t by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of MgCl2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.48 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8K1S
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Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8K1U
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Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
4EJV
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BU of 4ejv by Molmil
Staphylococcus epidermidis TcaR in complex with chloramphenicol
Descriptor: 2,2-dichloro-N-[(1S,2S)-1,3-dihydroxy-1-(4-nitrophenyl)propan-2-yl]acetamide, Transcriptional regulator TcaR
Authors:Chang, Y.M, Chen, C.K.M, Wang, A.H.J.
Deposit date:2012-04-07
Release date:2013-05-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural analysis of the antibiotic recognition mechanism of MarR family proteins
Acta Crystallogr.,Sect.D, 2013
4EJU
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BU of 4eju by Molmil
Staphylococcus epidermidis TcaR full length
Descriptor: Transcriptional regulator TcaR
Authors:Chang, Y.M, Chen, C.K.M, Wang, A.H.J.
Deposit date:2012-04-07
Release date:2013-05-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural analysis of the antibiotic recognition mechanism of MarR family proteins
Acta Crystallogr.,Sect.D, 2013
4EJW
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BU of 4ejw by Molmil
Staphylococcus epidermidis TcaR in complex with streptomycin
Descriptor: STREPTOMYCIN, Transcriptional regulator TcaR
Authors:Chang, Y.M, Chen, C.K.M, Wang, A.H.J.
Deposit date:2012-04-07
Release date:2013-05-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural analysis of the antibiotic recognition mechanism of MarR family proteins
Acta Crystallogr.,Sect.D, 2013
4R3K
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BU of 4r3k by Molmil
Crystal structure of Ard1 N-terminal acetyltransferase from Sulfolobus solfataricus bound to CoA
Descriptor: CALCIUM ION, COENZYME A, SULFATE ION, ...
Authors:Chang, Y.Y, Hsu, C.H.
Deposit date:2014-08-16
Release date:2015-03-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.133 Å)
Cite:Structural Basis for Substrate-specific Acetylation of N alpha-acetyltransferase Ard1 from Sulfolobus solfataricus
Sci Rep, 5, 2015
4R3L
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BU of 4r3l by Molmil
Crystal structure of Ard1 N-terminal acetyltransferase from Sulfolobus solfataricus bound to substrate peptide fragment and CoA
Descriptor: COENZYME A, N-terminal 6-mer peptide from Alba, Uncharacterized N-acetyltransferase SSO0209
Authors:Chang, Y.Y, Hsu, C.H.
Deposit date:2014-08-16
Release date:2015-03-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.839 Å)
Cite:Structural Basis for Substrate-specific Acetylation of N alpha-acetyltransferase Ard1 from Sulfolobus solfataricus
Sci Rep, 5, 2015
7UPQ
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BU of 7upq by Molmil
Crystal structure of designed heterotrimeric assembly DHT03_1arm_A21/B/C
Descriptor: DHT03 protein A, DHT03 protein B, DHT03 protein C
Authors:Chang, Y, Bhabha, G, Ekiert, D.C.
Deposit date:2022-04-16
Release date:2022-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:De novo design of obligate ABC-type heterotrimeric proteins.
Nat.Struct.Mol.Biol., 29, 2022
7UPO
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BU of 7upo by Molmil
Crystal structure of designed heterotrimeric assembly DHT03
Descriptor: DHT03 protein A, DHT03 protein B, DHT03 protein C
Authors:Chang, Y, Bhabha, G, Ekiert, D.C.
Deposit date:2022-04-16
Release date:2022-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:De novo design of obligate ABC-type heterotrimeric proteins.
Nat.Struct.Mol.Biol., 29, 2022
7UPP
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BU of 7upp by Molmil
Crystal structure of designed heterotrimeric assembly DHT03_2arm_A21/B21/C long
Descriptor: DHT03 protein A, DHT03 protein B, DHT03 protein C
Authors:Chang, Y, Bhabha, G, Ekiert, D.C.
Deposit date:2022-04-16
Release date:2022-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:De novo design of obligate ABC-type heterotrimeric proteins.
Nat.Struct.Mol.Biol., 29, 2022
7XAO
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BU of 7xao by Molmil
Crystal structure of thioredoxin 1
Descriptor: Thioredoxin
Authors:Chang, Y.J, Park, H.H.
Deposit date:2022-03-18
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:High-resolution crystal structure of Acinetobacter baumannii thioredoxin 1.
Biochem.Biophys.Res.Commun., 608, 2022
7UDN
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BU of 7udn by Molmil
Crystal structure of designed helical repeat protein RPB_PLP1_R6 in alternative conformation 2
Descriptor: Designed helical repeat protein (DHR) RPB_PLP1_R6
Authors:Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UDM
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BU of 7udm by Molmil
Crystal structure of designed helical repeat protein RPB_PLP1_R6 in alternative conformation 1 (with peptide)
Descriptor: 6xPLP, Designed helical repeat protein (DHR) RPB_PLP1_R6
Authors:Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
3OPW
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BU of 3opw by Molmil
Crystal Structure of the Rph1 catalytic core
Descriptor: DNA damage-responsive transcriptional repressor RPH1
Authors:Chang, Y, Wu, J, Tong, X, Zhou, J, Ding, J.
Deposit date:2010-09-02
Release date:2010-12-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the catalytic core of Saccharomyces cerevesiae histone demethylase Rph1: insights into the substrate specificity and catalytic mechanism
Biochem.J., 433, 2011
3OPT
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BU of 3opt by Molmil
Crystal structure of the Rph1 catalytic core with a-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, DNA damage-responsive transcriptional repressor RPH1, NICKEL (II) ION
Authors:Chang, Y, Wu, J, Tong, X, Zhou, J, Ding, J.
Deposit date:2010-09-02
Release date:2010-12-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the catalytic core of Saccharomyces cerevesiae histone demethylase Rph1: insights into the substrate specificity and catalytic mechanism
Biochem.J., 433, 2011
7UDK
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BU of 7udk by Molmil
Crystal structure of designed helical repeat protein RPB_LRP2_R4 bound to LRPx4 peptide
Descriptor: 4xLRP, Designed helical repeat protein (DHR) RPB_LRP2_R4
Authors:Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
4Z4X
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BU of 4z4x by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20D25N with Open Flap
Descriptor: Protease
Authors:Chang, Y.C, Shen, C.-H, Weber, I.T.
Deposit date:2015-04-02
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Conformational variation of an extreme drug resistant mutant of HIV protease.
J.Mol.Graph.Model., 62, 2015
3QO2
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BU of 3qo2 by Molmil
Structural insights for MPP8 chromodomain interaction with histone H3 lysine 9
Descriptor: 1,2-ETHANEDIOL, Histone H3 peptide, M-phase phosphoprotein 8
Authors:Chang, Y, Horton, J.R, Bedford, M.T, Zhang, X, Cheng, X.
Deposit date:2011-02-09
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural insights for MPP8 chromodomain interaction with histone H3 lysine 9: potential effect of phosphorylation on methyl-lysine binding.
J.Mol.Biol., 408, 2011
4EJT
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BU of 4ejt by Molmil
Staphylococcus epidermidis TcaR in complex with RNA
Descriptor: 5'-R(*AP*A)-3', Transcriptional regulator TcaR
Authors:Chang, Y.M, Chen, C.K.-M, Wang, A.H.-J.
Deposit date:2012-04-07
Release date:2013-06-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Functional studies of ssDNA binding ability of MarR family protein TcaR from Staphylococcus epidermidis.
Plos One, 7, 2012
7UE2
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BU of 7ue2 by Molmil
Crystal structure of designed helical repeat protein RPB_PLP3_R6 bound to PLPx6 peptide
Descriptor: PLPx6 peptide, RPB_PLP3_R6
Authors:Chang, Y, Ekiert, D.C, Bhabha, G.
Deposit date:2022-03-21
Release date:2023-03-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
6AG4
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BU of 6ag4 by Molmil
Crystal structure of Ard1 N-terminal acetyltransferase H88A/E127A mutant from Sulfolobus solfataricus
Descriptor: ACETYL COENZYME *A, CALCIUM ION, N-alpha-acetyltransferase, ...
Authors:Chang, Y.Y, Hsu, C.H.
Deposit date:2018-08-09
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.256 Å)
Cite:Adaptation of thermophilic acetyltransferase to a water-mediated catalytic mechanism.
Chem.Commun.(Camb.), 56, 2020

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