Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 127 results

2AEO
DownloadVisualize
BU of 2aeo by Molmil
Crystal structure of cisplatinated bovine Cu,Zn superoxide dismutase
Descriptor: COPPER (II) ION, Cisplatin, Superoxide dismutase [Cu-Zn], ...
Authors:Calderone, V, Casini, A, Mangani, S, Messori, L, Orioli, P.L.
Deposit date:2005-07-23
Release date:2006-05-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural investigation of cisplatin-protein interactions: selective platination of His19 in a cuprozinc superoxide dismutase.
Angew. Chem. Int. Ed. Engl., 45, 2006
6H6S
DownloadVisualize
BU of 6h6s by Molmil
Sad phasing on nickel-substituted human carbonic anhydrase II
Descriptor: Carbonic anhydrase 2, NICKEL (II) ION
Authors:Calderone, V, Fragai, M, Silva, J.P, Luchinat, C, Ravera, E, Geraldes, C.F.G.C, Macedo, A.L, Cerofolini, L, Giuntini, S.
Deposit date:2018-07-30
Release date:2019-01-09
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Non-crystallographic symmetry in proteins: Jahn-Teller-like and Butterfly-like effects?
J. Biol. Inorg. Chem., 24, 2019
1KQX
DownloadVisualize
BU of 1kqx by Molmil
Crystal structure of apo-CRBP from zebrafish
Descriptor: Cellular retinol-binding protein
Authors:Calderone, V, Folli, C, Marchesani, A, Berni, R, Zanotti, G.
Deposit date:2002-01-08
Release date:2002-08-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification and structural analysis of a zebrafish apo and holo cellular retinol-binding protein.
J.Mol.Biol., 321, 2002
1KQW
DownloadVisualize
BU of 1kqw by Molmil
Crystal structure of holo-CRBP from zebrafish
Descriptor: Cellular retinol-binding protein, RETINOL
Authors:Calderone, V, Folli, C, Marchesani, A, Berni, R, Zanotti, G.
Deposit date:2002-01-08
Release date:2002-08-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Identification and structural analysis of a zebrafish apo and holo cellular retinol-binding protein.
J.Mol.Biol., 321, 2002
3LKA
DownloadVisualize
BU of 3lka by Molmil
Catalytic domain of human MMP-12 complexed with hydroxamic acid and paramethoxy-sulfonyl amide
Descriptor: 4-methoxybenzenesulfonamide, ACETOHYDROXAMIC ACID, CALCIUM ION, ...
Authors:Calderone, V.
Deposit date:2010-01-27
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Entropic contribution to the linking coefficient in fragment based drug design: a case study.
J.Med.Chem., 53, 2010
3NXA
DownloadVisualize
BU of 3nxa by Molmil
X-ray structure of the apo form of human S100A16
Descriptor: Protein S100-A16
Authors:Calderone, V.
Deposit date:2010-07-13
Release date:2010-11-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of human S100A16, a low-affinity calcium binder.
J.Biol.Inorg.Chem., 16, 2011
1RJU
DownloadVisualize
BU of 1rju by Molmil
Crystal structure of a truncated form of yeast copper thionein
Descriptor: COPPER (I) ION, Metallothionein
Authors:Calderone, V, Dolderer, B, Hartmann, H.J, Echner, H, Luchinat, C, Del Bianco, C, Mangani, S, Weser, U.
Deposit date:2003-11-20
Release date:2004-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:The Crystal Structure of Yeast Copper Thionein: the solution of a long lasting Enigma.
Proc.Natl.Acad.Sci.USA, 102, 2005
3EHX
DownloadVisualize
BU of 3ehx by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor (R)-2-(biphenyl-4-ylsulfonamido)-4-methylpentanoic acid
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-(biphenyl-4-ylsulfonyl)-D-leucine, ...
Authors:Calderone, V.
Deposit date:2008-09-15
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biotin-tagged probes for MMP expression and activation: design, synthesis, and binding properties
Bioconjug.Chem., 20, 2009
3EHY
DownloadVisualize
BU of 3ehy by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor (R)-2-(4-methoxyphenylsulfonamido)propanoic acid
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-[(4-methoxyphenyl)sulfonyl]-D-alanine, ...
Authors:Calderone, V.
Deposit date:2008-09-15
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biotin-tagged probes for MMP expression and activation: design, synthesis, and binding properties
Bioconjug.Chem., 20, 2009
3F1A
DownloadVisualize
BU of 3f1a by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-oxo-2-(phenylsulfonylamino)ethanamide, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3F19
DownloadVisualize
BU of 3f19 by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor 4-fluoro-N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Descriptor: 2-[(4-fluorophenyl)sulfonylamino]-N-oxo-ethanamide, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3F16
DownloadVisualize
BU of 3f16 by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor (R)-N-(3-hydroxy-1-nitroso-1-oxopropan-2-yl)-4-methoxybenzenesulfonamide
Descriptor: (2R)-3-hydroxy-2-[(4-methoxyphenyl)sulfonylamino]-N-oxo-propanamide, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3F17
DownloadVisualize
BU of 3f17 by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor N-(2-nitroso-2-oxoethyl)biphenyl-4-sulfonamide
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-oxidanyl-2-[(4-phenylphenyl)sulfonylamino]ethanamide, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3F15
DownloadVisualize
BU of 3f15 by Molmil
Crystal structure of the catalytic domain of human mmp12 complexed with the inhibitor (S)-N-(2,3-dihydroxypropyl)-4-methoxy-N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Descriptor: 2-[[(2S)-2,3-dihydroxypropyl]-(4-methoxyphenyl)sulfonyl-amino]-N-oxo-ethanamide, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3F18
DownloadVisualize
BU of 3f18 by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor 4-fluoro-N-(2-hydroxyethyl)-N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Descriptor: 2-[(4-fluorophenyl)sulfonyl-(2-hydroxyethyl)amino]-N-oxo-ethanamide, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
1RMT
DownloadVisualize
BU of 1rmt by Molmil
Crystal structure of AphA class B acid phosphatase/phosphotransferase complexed with adenosine.
Descriptor: ADENOSINE, Class B acid phosphatase, MAGNESIUM ION
Authors:Calderone, V, Forleo, C, Benvenuti, M, Rossolini, G.M, Thaller, M.C, Mangani, S.
Deposit date:2003-11-28
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Insights in the catalytic mechanism of AphA from Escherichia coli
To be Published
2OXU
DownloadVisualize
BU of 2oxu by Molmil
Uninhibited form of human MMP-12
Descriptor: CALCIUM ION, Macrophage metalloelastase, ZINC ION
Authors:Calderone, V, Bertini, I, Fragai, M, Luchinat, C, Maletta, M, Yeo, K.J.
Deposit date:2007-02-21
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Snapshots of the reaction mechanism of matrix metalloproteinases.
ANGEW.CHEM.INT.ED.ENGL., 45, 2006
2OXZ
DownloadVisualize
BU of 2oxz by Molmil
Human MMP-12 in complex with two peptides PQG and IAG
Descriptor: CALCIUM ION, ILE-ALA-GLY peptide, Macrophage metalloelastase, ...
Authors:Calderone, V, Bertini, I, Fragai, M, Luchinat, C, Maletta, M, Yeo, K.J.
Deposit date:2007-02-21
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Snapshots of the reaction mechanism of matrix metalloproteinases.
ANGEW.CHEM.INT.ED.ENGL., 45, 2006
1Q3A
DownloadVisualize
BU of 1q3a by Molmil
Crystal structure of the catalytic domain of human matrix metalloproteinase 10
Descriptor: CALCIUM ION, N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC ACID, Stromelysin-2, ...
Authors:Calderone, V, Bertini, I, Fragai, M, Luchinat, C, Mangani, S, Terni, B.
Deposit date:2003-07-29
Release date:2004-04-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the catalytic domain of human matrix metalloproteinase 10.
J.Mol.Biol., 336, 2004
2OXW
DownloadVisualize
BU of 2oxw by Molmil
Human MMP-12 complexed with the peptide IAG
Descriptor: CALCIUM ION, ILE-ALA-GLY peptide, Macrophage metalloelastase, ...
Authors:Calderone, V, Bertini, I, Fragai, M, Luchinat, C, Maletta, M, Yeo, K.J.
Deposit date:2007-02-21
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Snapshots of the reaction mechanism of matrix metalloproteinases.
ANGEW.CHEM.INT.ED.ENGL., 45, 2006
1NAQ
DownloadVisualize
BU of 1naq by Molmil
Crystal structure of CUTA1 from E.coli at 1.7 A resolution
Descriptor: MERCURIBENZOIC ACID, MERCURY (II) ION, Periplasmic divalent cation tolerance protein cutA
Authors:Calderone, V, Mangani, S, Benvenuti, M, Viezzoli, M.S, Banci, L, Bertini, I, Structural Proteomics in Europe (SPINE)
Deposit date:2002-11-28
Release date:2003-11-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The evolutionarily conserved trimeric structure of CutA1 proteins suggests a role in signal transduction.
J.Biol.Chem., 278, 2003
1KT6
DownloadVisualize
BU of 1kt6 by Molmil
Crystal structure of bovine holo-RBP at pH 9.0
Descriptor: RETINOL, plasma retinol-binding protein
Authors:Calderone, V, Berni, R, Zanotti, G.
Deposit date:2002-01-15
Release date:2003-06-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-resolution Structures of Retinol-binding Protein in Complex with Retinol: pH-induced Protein Structural Changes in the Crystal State
J.Mol.Biol., 329, 2003
1KT7
DownloadVisualize
BU of 1kt7 by Molmil
Crystal structure of bovine holo-RBP at pH 7.0
Descriptor: Plasma retinol-binding protein, RETINOL
Authors:Calderone, V, Berni, R, Zanotti, G.
Deposit date:2002-01-15
Release date:2003-06-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.274 Å)
Cite:High-resolution Structures of Retinol-binding Protein in Complex with Retinol: pH-induced Protein Structural Changes in the Crystal State
J.Mol.Biol., 329, 2003
1KT3
DownloadVisualize
BU of 1kt3 by Molmil
Crystal structure of bovine holo-RBP at pH 2.0
Descriptor: Plasma retinol-binding protein, RETINOL
Authors:Calderone, V, Berni, R, Zanotti, G.
Deposit date:2002-01-15
Release date:2003-06-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-resolution Structures of Retinol-binding Protein in Complex with Retinol: pH-induced Protein Structural Changes in the Crystal State
J.Mol.Biol., 329, 2003
1KT5
DownloadVisualize
BU of 1kt5 by Molmil
Crystal structure of bovine holo-RBP at pH 4.0
Descriptor: Plasma retinol-binding protein, RETINOL
Authors:Calderone, V, Berni, R, Zanotti, G.
Deposit date:2002-01-15
Release date:2003-06-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:High-resolution Structures of Retinol-binding Protein in Complex with Retinol: pH-induced Protein Structural Changes in the Crystal State
J.Mol.Biol., 329, 2003

221051

數據於2024-06-12公開中

PDB statisticsPDBj update infoContact PDBjnumon