Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1273 results

7BEX
DownloadVisualize
BU of 7bex by Molmil
Glyceraldehyde 3-phosphate dehydrogenase from Campylobacter jejeuni - ADP complex
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, BETA-MERCAPTOETHANOL, ...
Authors:Moody, P.C.E, Ayna, A.
Deposit date:2020-12-29
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.054 Å)
Cite:structure of Camplylobacter jejueni GAPDH in complex with ADP
To Be Published
5VYA
DownloadVisualize
BU of 5vya by Molmil
S. cerevisiae Hsp104:casein complex, Extended Conformation
Descriptor: Alpha-S1-casein, Heat shock protein 104, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Gates, S.N, Yokom, A.L, Lin, J.-B, Jackrel, M.E, Rizo, A.N, Kendsersky, N.M, Buell, C.E, Sweeny, E.A, Chuang, E, Torrente, M.P, Mack, K.L, Su, M, Shorter, J, Southworth, D.R.
Deposit date:2017-05-24
Release date:2017-07-05
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Ratchet-like polypeptide translocation mechanism of the AAA+ disaggregase Hsp104.
Science, 357, 2017
5VY9
DownloadVisualize
BU of 5vy9 by Molmil
S. cerevisiae Hsp104:casein complex, Middle Domain Conformation
Descriptor: Alpha-S1-casein, Heat shock protein 104, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Gates, S.N, Yokom, A.L, Lin, J.-B, Jackrel, M.E, Rizo, A.N, Kendsersky, N.M, Buell, C.E, Sweeny, E.A, Chuang, E, Torrente, M.P, Mack, K.L, Su, M, Shorter, J, Southworth, D.R.
Deposit date:2017-05-24
Release date:2017-07-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Ratchet-like polypeptide translocation mechanism of the AAA+ disaggregase Hsp104.
Science, 357, 2017
7TE2
DownloadVisualize
BU of 7te2 by Molmil
Crystal Structure of AerR from Rhodobacter capsulatus at 2.25 A.
Descriptor: AerR, CHLORIDE ION, COBALAMIN, ...
Authors:Dragnea, V, Gonzalez-Gutierrez, G, Bauer, C.E.
Deposit date:2022-01-04
Release date:2022-08-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Analyses of CrtJ and Its B 12 -Binding Co-Regulators SAerR and LAerR from the Purple Photosynthetic Bacterium Rhodobacter capsulatus.
Microorganisms, 10, 2022
7T3F
DownloadVisualize
BU of 7t3f by Molmil
Development of BRD4 inhibitors as arsenicals antidotes
Descriptor: 4-fluoro-3-methyl-N-(3-methyl-2-oxo-1,2,3,4-tetrahydroquinazolin-6-yl)benzene-1-sulfonamide, Bromodomain-containing protein 4, GLYCEROL
Authors:Wu, M, Yatchang, M, Mathew, B, Zhai, L, Ruiz, P, Bostwick, R, Augelli-Szafran, C.E, Suto, M.J.
Deposit date:2021-12-07
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Development of BRD4 inhibitors as anti-inflammatory agents and antidotes for arsenicals.
Bioorg.Med.Chem.Lett., 64, 2022
5W8Q
DownloadVisualize
BU of 5w8q by Molmil
Crystal structure of biphenyl synthase from Malus domestica
Descriptor: (3R)-butane-1,3-diol, BIS3 biphenyl synthase
Authors:Stewart Jr, C.E, Noel, J.P.
Deposit date:2017-06-22
Release date:2017-12-13
Method:X-RAY DIFFRACTION (1.173 Å)
Cite:Molecular architectures of benzoic acid-specific type III polyketide synthases.
Acta Crystallogr D Struct Biol, 73, 2017
5WC4
DownloadVisualize
BU of 5wc4 by Molmil
Crystal structure of biphenyl synthase from Malus domestic complexed with benzoyl-CoA
Descriptor: (3R)-butane-1,3-diol, BIS3 biphenyl synthase, benzoyl coenzyme A
Authors:Stewart Jr, C.E, Noel, J.P.
Deposit date:2017-06-29
Release date:2017-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Molecular architectures of benzoic acid-specific type III polyketide synthases.
Acta Crystallogr D Struct Biol, 73, 2017
5UVL
DownloadVisualize
BU of 5uvl by Molmil
Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using Synchrotron Radiation
Descriptor: CALCIUM ION, NITRATE ION, Proteinase K
Authors:Martin-Garcia, J.M, Conrad, C.E, Nelson, G, Stander, N, Zatsepin, N.A, Zook, J, Zhu, L, Geiger, J, Chun, E, Kissick, D, Hilgart, M.C, Ogata, C, Ishchenko, A, Nagaratnam, N, Roy-Chowdhury, S, Coe, J, Subramanian, G, Schaffer, A, James, D, Ketawala, G, Venugopalan, N, Xu, S, Corcoran, S, Ferguson, D, Weierstall, U, Spence, J.C.H, Cherezov, V, Fromme, P, Fischetti, R.F, Liu, W.
Deposit date:2017-02-20
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Serial millisecond crystallography of membrane and soluble protein microcrystals using synchrotron radiation.
IUCrJ, 4, 2017
7MLF
DownloadVisualize
BU of 7mlf by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) Covalently Bound to Compound C7
Descriptor: 3C-like proteinase, N-(4-tert-butylphenyl)-2-chloro-N-[(1R)-2-(cyclohexylamino)-2-oxo-1-(pyridin-3-yl)ethyl]acetamide
Authors:Sharon, I, Stille, J, Tjutrins, J, Wang, G, Venegas, F.A, Hennecker, C, Rueda, A.M, Miron, C.E, Pinus, S, Labarre, A, Patrascu, M.B, Vlaho, D, Huot, M, Mittermaier, A.K, Moitessier, N, Schmeing, T.M.
Deposit date:2021-04-28
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design, synthesis and in vitro evaluation of novel SARS-CoV-2 3CL pro covalent inhibitors.
Eur.J.Med.Chem., 229, 2021
7MLG
DownloadVisualize
BU of 7mlg by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) Covalently Bound to Compound C63
Descriptor: (2R)-2-[(4-tert-butylphenyl)(ethanesulfonyl)amino]-N-cyclohexyl-2-(pyridin-3-yl)acetamide, 3C-like proteinase
Authors:Sharon, I, Stille, J, Tjutrins, J, Wang, G, Venegas, F.A, Hennecker, C, Rueda, A.M, Miron, C.E, Pinus, S, Labarre, A, Patrascu, M.B, Vlaho, D, Huot, M, Mittermaier, A.K, Moitessier, N, Schmeing, T.M.
Deposit date:2021-04-28
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Design, synthesis and in vitro evaluation of novel SARS-CoV-2 3CL pro covalent inhibitors.
Eur.J.Med.Chem., 229, 2021
7NFU
DownloadVisualize
BU of 7nfu by Molmil
Crystal structure of C-terminally truncated Geobacillus thermoleovorans nucleoid occlusion protein Noc
Descriptor: GLYCEROL, Nucleoid occlusion protein, SULFATE ION
Authors:Jalal, A.S.B, Tran, N.T, Wu, L.J, Ramakrishnan, K, Rejzek, M, Stevenson, C.E.M, Lawson, D.M, Errington, J, Le, T.B.K.
Deposit date:2021-02-07
Release date:2021-02-17
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:CTP regulates membrane-binding activity of the nucleoid occlusion protein Noc.
Mol.Cell, 81, 2021
7NG0
DownloadVisualize
BU of 7ng0 by Molmil
Crystal structure of N- and C-terminally truncated Geobacillus thermoleovorans nucleoid occlusion protein Noc
Descriptor: Nucleoid occlusion protein, SULFATE ION
Authors:Jalal, A.S.B, Tran, N.T, Wu, L.J, Ramakrishnan, K, Rejzek, M, Stevenson, C.E.M, Lawson, D.M, Errington, J, Le, T.B.K.
Deposit date:2021-02-08
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:CTP regulates membrane-binding activity of the nucleoid occlusion protein Noc.
Mol.Cell, 81, 2021
8OK4
DownloadVisualize
BU of 8ok4 by Molmil
Variant Surface Glycoprotein VSG11wt-Oil
Descriptor: Variant surface glycoprotein, alpha-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Zeelen, J.P, Stebbins, C.E, Aresta-Branco, F, Foti, K.
Deposit date:2023-03-27
Release date:2023-09-13
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:A structural classification of the variant surface glycoproteins of the African trypanosomey.
Plos Negl Trop Dis, 17, 2023
8ONH
DownloadVisualize
BU of 8onh by Molmil
Variant Surface Glycoprotein VSG11wt-Oil
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Variant surface glycoprotein, alpha-D-glucopyranose, ...
Authors:Zeelen, J.P, Stebbins, C.E, Foti, K, Gkeka, A, Vlachou, E.P.
Deposit date:2023-04-03
Release date:2023-09-13
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:A structural classification of the variant surface glycoproteins of the African trypanosomey.
Plos Negl Trop Dis, 17, 2023
8OK8
DownloadVisualize
BU of 8ok8 by Molmil
Variant Surface Glycoprotein VSG615
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Variant surface glycoprotein 615, ...
Authors:Zeelen, J.P, Stebbins, C.E, Chandra, M.
Deposit date:2023-03-27
Release date:2023-09-13
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:A structural classification of the variant surface glycoproteins of the African trypanosomey.
Plos Negl Trop Dis, 17, 2023
8OK5
DownloadVisualize
BU of 8ok5 by Molmil
Variant Surface Glycoprotein VSG11 monomer with iodine
Descriptor: IODIDE ION, Variant surface glycoprotein, alpha-D-glucopyranose, ...
Authors:Zeelen, J.P, Stebbins, C.E, Aresta-Branco, F.
Deposit date:2023-03-27
Release date:2023-09-13
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:A structural classification of the variant surface glycoproteins of the African trypanosomey.
Plos Negl Trop Dis, 17, 2023
8OK6
DownloadVisualize
BU of 8ok6 by Molmil
Variant Surface Glycoprotein VSG11 two monomers
Descriptor: SULFATE ION, Variant surface glycoprotein, alpha-D-glucopyranose, ...
Authors:Gkeka, A, Vlachou, E.P, Zeelen, J.P, Stebbins, C.E.
Deposit date:2023-03-27
Release date:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A structural classification of the variant surface glycoproteins of the African trypanosomey.
Plos Negl Trop Dis, 17, 2023
8OK7
DownloadVisualize
BU of 8ok7 by Molmil
Variant Surface Glycoprotein VSG558 NTD
Descriptor: Variant surface glycoprotein 558, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zeelen, J.P, Stebbins, C.E, van Straaten, M, Zhong, J.
Deposit date:2023-03-27
Release date:2023-09-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:A structural classification of the variant surface glycoproteins of the African trypanosomey.
Plos Negl Trop Dis, 17, 2023
5L40
DownloadVisualize
BU of 5l40 by Molmil
polyketide ketoreductase SimC7 - apo crystal form 1
Descriptor: polyketide ketoreductase SimC7
Authors:Schafer, M, Stevenson, C.E.M, Wilkinson, B, Lawson, D.M, Buttner, M.J.
Deposit date:2016-05-24
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Substrate-Assisted Catalysis in Polyketide Reduction Proceeds via a Phenolate Intermediate.
Cell Chem Biol, 23, 2016
8ODT
DownloadVisualize
BU of 8odt by Molmil
Structure of TolQR complex from E.coli
Descriptor: Tol-Pal system protein TolQ, Tol-Pal system protein TolR
Authors:Webby, M.N, Kleanthous, C, Press, C.E.
Deposit date:2023-03-09
Release date:2023-11-01
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Tunable force transduction through the Escherichia coli cell envelope.
Proc.Natl.Acad.Sci.USA, 120, 2023
5VJH
DownloadVisualize
BU of 5vjh by Molmil
Closed State CryoEM Reconstruction of Hsp104:ATPyS and FITC casein
Descriptor: FITC casein, Heat shock protein 104, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Gates, S.N, Yokom, A.L, Lin, J.-B, Jackrel, M.E, Rizo, A.N, Kendsersky, N.M, Buell, C.E, Sweeny, E.A, Chuang, E, Torrente, M.P, Mack, K.L, Su, M, Shorter, J, Southworth, D.R.
Deposit date:2017-04-19
Release date:2017-07-05
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Ratchet-like polypeptide translocation mechanism of the AAA+ disaggregase Hsp104.
Science, 357, 2017
7M4U
DownloadVisualize
BU of 7m4u by Molmil
A. baumannii Ribosome-Eravacycline complex: 30S
Descriptor: 16s Ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2021-03-22
Release date:2021-05-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii.
Mbio, 12, 2021
7M4X
DownloadVisualize
BU of 7m4x by Molmil
A. baumannii Ribosome-Eravacycline complex: P-site tRNA 70S
Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2021-03-22
Release date:2021-05-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii.
Mbio, 12, 2021
7BI1
DownloadVisualize
BU of 7bi1 by Molmil
XFEL crystal structure of soybean ascorbate peroxidase compound II
Descriptor: Ascorbate peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kwon, H, Tosha, T, Sugimoto, H, Raven, E.L, Moody, P.C.E.
Deposit date:2021-01-12
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:XFEL Crystal Structures of Peroxidase Compound II.
Angew.Chem.Int.Ed.Engl., 60, 2021
7BIU
DownloadVisualize
BU of 7biu by Molmil
XFEL crystal structure of cytochrome c peroxidase compound II
Descriptor: Cytochrome c peroxidase, mitochondrial, HEME C
Authors:Kwon, H, Tosha, T, Sugimoto, H, Raven, E.L, Moody, P.C.E.
Deposit date:2021-01-13
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:XFEL Crystal Structures of Peroxidase Compound II.
Angew.Chem.Int.Ed.Engl., 60, 2021

221371

数据于2024-06-19公开中

PDB statisticsPDBj update infoContact PDBjnumon