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PDB: 324 results

7SGT
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BU of 7sgt by Molmil
Domain III (EDIII) of the POWV E glycoprotein
Descriptor: Envelope protein E
Authors:Harris, R, Cahill, S.M, Cowburn, D.
Deposit date:2021-10-07
Release date:2022-05-18
Last modified:2022-06-22
Method:SOLUTION NMR
Cite:A Powassan virus domain III nanoparticle immunogen elicits neutralizing and protective antibodies in mice.
Plos Pathog., 18, 2022
2GGR
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BU of 2ggr by Molmil
Solution structure of the C-terminal SH3 domain of c-CrkII
Descriptor: Proto-oncogene C-crk
Authors:Muralidharan, V, Dutta, K, Muir, T.W, Cowburn, D.
Deposit date:2006-03-24
Release date:2006-08-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure and Folding Characteristics of the C-Terminal SH3 Domain of c-Crk-II
Biochemistry, 45, 2006
2GG1
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BU of 2gg1 by Molmil
NMR solution structure of domain III of the E-protein of tick-borne Langat flavivirus (includes RDC restraints)
Descriptor: Genome polyprotein
Authors:Mukherjee, M, Dutta, K, White, M.A, Cowburn, D, Fox, R.O.
Deposit date:2006-03-23
Release date:2006-04-25
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:NMR solution structure and backbone dynamics of domain III of the E protein of tick-borne Langat flavivirus suggests a potential site for molecular recognition.
Protein Sci., 15, 2006
7PBW
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BU of 7pbw by Molmil
Cryo-EM structure of light harvesting complex 2 from Rba. sphaeroides.
Descriptor: BACTERIOCHLOROPHYLL A, CALCIUM ION, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:Qian, P, Swainsbury, D.J.K, Croll, T.I, Castro-Hartmann, P, Sader, K, Divitini, G, Hunter, C.N.
Deposit date:2021-08-02
Release date:2021-11-24
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Cryo-EM Structure of the Rhodobacter sphaeroides Light-Harvesting 2 Complex at 2.1 angstrom.
Biochemistry, 60, 2021
6OHY
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BU of 6ohy by Molmil
Chimpanzee SIV Env trimeric ectodomain.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pallesen, J, Andrabi, R, de Val, N, Burton, D.R, Ward, A.B.
Deposit date:2019-04-08
Release date:2019-06-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:The Chimpanzee SIV Envelope Trimer: Structure and Deployment as an HIV Vaccine Template.
Cell Rep, 27, 2019
7JJN
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BU of 7jjn by Molmil
Eubacterium rectale Amy13B (EUR_01860)
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Koropatkin, N.M, Cockburn, D.W, Cerqueira, F.M.
Deposit date:2020-07-27
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The structures of the GH13_36 amylases from Eubacterium rectale and Ruminococcus bromii reveal subsite architectures that favor maltose production
Amylase, 4, 2020
7R0W
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BU of 7r0w by Molmil
2.8 Angstrom cryo-EM structure of the dimeric cytochrome b6f-PetP complex from Synechocystis sp. PCC 6803 with natively bound lipids and plastoquinone molecules
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S,8E)-1-{[(2S)-1-hydroxy-3-{[(1S)-1-hydroxypentadecyl]oxy}propan-2-yl]oxy}heptadec-8-en-1-ol, (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, ...
Authors:Farmer, D.F, Proctor, M.S, Malone, L.A, Swainsbury, D.P.K, Hawkings, F.R, Hitchcock, A, Johnson, M.P.
Deposit date:2022-02-02
Release date:2022-07-06
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of the Synechocystis sp. PCC 6803 cytochrome b6f complex with and without the regulatory PetP subunit.
Biochem.J., 479, 2022
7LSA
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BU of 7lsa by Molmil
Ruminococcus bromii Amy12 with maltoheptaose
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Koropatkin, N.M, Cockburn, D.W, Brown, H.A, Kibler, R.D.
Deposit date:2021-02-18
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure and substrate recognition by the Ruminococcus bromii amylosome pullulanases.
J.Struct.Biol., 213, 2021
7LST
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BU of 7lst by Molmil
Ruminococcus bromii Amy12-D392A with 63-a-D-glucosyl-maltotriosyl-maltotriose
Descriptor: ACETATE ION, CALCIUM ION, GLYCEROL, ...
Authors:Koropatkin, N.M, Cockburn, D.W, Brown, H.A, Kibler, R.D.
Deposit date:2021-02-18
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure and substrate recognition by the Ruminococcus bromii amylosome pullulanases.
J.Struct.Biol., 213, 2021
7LSU
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BU of 7lsu by Molmil
Ruminococcus bromii Amy12-D392A with 63-a-D-glucosyl-maltotriose
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Koropatkin, N.M, Cockburn, D.W, Brown, H.A, Kibler, R.D.
Deposit date:2021-02-18
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and substrate recognition by the Ruminococcus bromii amylosome pullulanases.
J.Struct.Biol., 213, 2021
7LSR
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BU of 7lsr by Molmil
Ruminococcus bromii Amy12-D392A with maltoheptaose
Descriptor: CALCIUM ION, GLYCEROL, Pullulanase, ...
Authors:Koropatkin, N.M, Cockburn, D.W, Brown, H.A, Kibler, R.D.
Deposit date:2021-02-18
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structure and substrate recognition by the Ruminococcus bromii amylosome pullulanases.
J.Struct.Biol., 213, 2021
6QQN
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BU of 6qqn by Molmil
Tubulin-TH588 complex
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Patterson, J.C, Joughin, B.A, Prota, A.E, Muehlethaler, T, Jonas, O.H, Whitman, M.A, Varmeh, S, Chen, S, Balk, S.P, Steinmetz, M.O, Lauffenburger, D.A, Yaffe, M.B.
Deposit date:2019-02-18
Release date:2019-07-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:VISAGE Reveals a Targetable Mitotic Spindle Vulnerability in Cancer Cells.
Cell Syst, 9, 2019
7KCR
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BU of 7kcr by Molmil
Cryo-EM structure of Zika virus in complex with E protein cross-linking human monoclonal antibody ADI30056
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADI30056 Fab heavy chain variable region, ADI30056 Fab light chain variable region, ...
Authors:Sevvana, M, Rogers, T.F, Miller, A.S, Long, F, Klose, T, Beutler, N, Lai, Y.C, Parren, M, Walker, L.M, Buda, G, Burton, D.R, Rossmann, M.G, Kuhn, R.J.
Deposit date:2020-10-07
Release date:2020-12-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural Basis of Zika Virus Specific Neutralization in Subsequent Flavivirus Infections.
Viruses, 12, 2020
6VAP
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BU of 6vap by Molmil
Structure of the type II thioesterase BorB from the borrelidin biosynthetic cluster
Descriptor: Thioesterase
Authors:Pereira, J.H, Curran, S.C, Baluyot, M.-J, Lake, J, Putz, H, Rosenburg, D, Keasling, J, Adams, P.D.
Deposit date:2019-12-17
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure and Function of BorB, the Type II Thioesterase from the Borrelidin Biosynthetic Gene Cluster.
Biochemistry, 59, 2020
8FG1
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BU of 8fg1 by Molmil
Human diaphanous inhibitory domain bound to diaphanous autoregulatory domain
Descriptor: Protein diaphanous homolog 1
Authors:Ramirez, L.M.S, Theophall, G, Premo, A, Manigrasso, M, Yepuri, G, Burz, D, Ramasamy, R, Schmidt, A.M, Shekhtman, A.
Deposit date:2022-12-12
Release date:2023-10-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Disruption of the productive encounter complex results in dysregulation of DIAPH1 activity.
J.Biol.Chem., 299, 2023
8PAT
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BU of 8pat by Molmil
Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 3.
Descriptor: ACE-GLN-ALC-GLX-LEU-PHE, Beta sliding clamp
Authors:Compain, G, Monsarrat, C, Blagojevic, J, Brillet, K, Dumas, P, Hammann, P, Kuhn, L, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Burnouf, D, Guichard, G.
Deposit date:2023-06-08
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp.
Jacs Au, 4, 2024
8PAY
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BU of 8pay by Molmil
Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 2.
Descriptor: ACE-GLN-ALC-GLC-LEU-PHE, Beta sliding clamp, GLYCEROL, ...
Authors:Compain, G, Monsarrat, C, Blagojevic, J, Brillet, K, Dumas, P, Hammann, P, Kuhn, L, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Burnouf, D, wagner, J, Guichard, G.
Deposit date:2023-06-08
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp.
Jacs Au, 4, 2024
6BS6
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BU of 6bs6 by Molmil
SusG with mixed linkage amylosaccharide
Descriptor: ACETATE ION, Alpha-amylase SusG, CALCIUM ION, ...
Authors:Koropatkin, N.M, Cockburn, D.W.
Deposit date:2017-12-01
Release date:2018-01-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structural basis for the flexible recognition of alpha-glucan substrates by Bacteroides thetaiotaomicron SusG.
Protein Sci., 27, 2018
7LDG
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BU of 7ldg by Molmil
Crystal structure of the MEILB2-BRCA2 complex
Descriptor: Breast cancer type 2 susceptibility protein, Heat shock factor 2-binding protein
Authors:Nandakumar, J, Pendlebury, D.F.
Deposit date:2021-01-13
Release date:2021-08-11
Last modified:2021-08-25
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structure of a meiosis-specific complex central to BRCA2 localization at recombination sites.
Nat.Struct.Mol.Biol., 28, 2021
6FVL
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BU of 6fvl by Molmil
DNA polymerase sliding clamp from Escherichia coli with bound P7 peptide
Descriptor: Beta sliding clamp, GLYCEROL, P7 peptide, ...
Authors:Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D.
Deposit date:2018-03-04
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.975 Å)
Cite:Peptide Interactions on Bacterial Sliding Clamps.
Acs Infect Dis., 2019
5ELD
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BU of 5eld by Molmil
Cholera toxin classical B-pentamer in complex with A Lewis-y
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cholera enterotoxin B subunit, DI(HYDROXYETHYL)ETHER, ...
Authors:Heggelund, J.E, Burschowsky, D, Krengel, U.
Deposit date:2015-11-04
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-Resolution Crystal Structures Elucidate the Molecular Basis of Cholera Blood Group Dependence.
Plos Pathog., 12, 2016
5ELF
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BU of 5elf by Molmil
Cholera toxin El Tor B-pentamer in complex with A-pentasaccharide
Descriptor: BICINE, CALCIUM ION, Cholera enterotoxin subunit B, ...
Authors:Heggelund, J.E, Burschowsky, D, Krengel, U.
Deposit date:2015-11-04
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:High-Resolution Crystal Structures Elucidate the Molecular Basis of Cholera Blood Group Dependence.
Plos Pathog., 12, 2016
4TR7
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BU of 4tr7 by Molmil
Crystal structure of DNA polymerase sliding clamp from Mycobaterium tuberculosis
Descriptor: DNA polymerase III subunit beta
Authors:Olieric, V, Burnouf, D, Ennifar, E, Wolff, P.
Deposit date:2014-06-14
Release date:2014-09-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J.Med.Chem., 57, 2014
4TR8
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BU of 4tr8 by Molmil
Crystal structure of DNA polymerase sliding clamp from Pseudomonas aeruginosa
Descriptor: DNA polymerase III subunit beta, SODIUM ION
Authors:Olieric, V, Burnouf, D, Ennifar, E, Wolff, P.
Deposit date:2014-06-15
Release date:2014-09-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J.Med.Chem., 57, 2014
5ELB
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BU of 5elb by Molmil
Cholera toxin classical B-pentamer in complex with Lewis-y
Descriptor: BICINE, CALCIUM ION, Cholera enterotoxin B subunit, ...
Authors:Heggelund, J.E, Burschowsky, D, Krengel, U.
Deposit date:2015-11-04
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:High-Resolution Crystal Structures Elucidate the Molecular Basis of Cholera Blood Group Dependence.
Plos Pathog., 12, 2016

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