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PDB: 40 results

2VBN
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BU of 2vbn by Molmil
Molecular basis of human XPC gene recognition and cleavage by engineered homing endonuclease heterodimers
Descriptor: 5'-D(*AP*AP*AP*AP*GP*GP*CP*AP*GP*AP)-3', 5'-D(*AP*GP*GP*AP*TP*CP*CP*TP*AP*AP)-3', 5'-D(*TP*CP*TP*GP*CP*CP*TP*TP*TP*TP *TP*TP*GP*AP)-3', ...
Authors:Redondo, P, Prieto, J, Munoz, I.G, Alibes, A, Stricher, F, Serrano, L, Arnould, S, Perez, C, Cabaniols, J.P, Duchateau, P, Paques, F, Blanco, F.J, Montoya, G.
Deposit date:2007-09-14
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular Basis of Xeroderma Pigmentosum Group C DNA Recognition by Engineered Meganucleases
Nature, 456, 2008
2VS8
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The crystal structure of I-DmoI in complex with DNA and Mn
Descriptor: 5'-D(*CP*CP*GP*GP*CP*AP*AP* GP*GP*CP)-3', 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP *CP*TP*TP*AP*C)-3', 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP *GP*TP*AP*A)-3', ...
Authors:Marcaida, M.J, Prieto, J, Redondo, P, Nadra, A.D, Alibes, A, Serrano, L, Grizot, S, Duchateau, P, Paques, F, Blanco, F.J, Montoya, G.
Deposit date:2008-04-21
Release date:2008-11-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of I-Dmoi in Complex with its Target DNA Provides New Insights Into Meganuclease Engineering.
Proc.Natl.Acad.Sci.USA, 105, 2008
5A74
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Crystal structure of the homing endonuclease I-CvuI in complex with its target (Sro1.3) in the presence of 2 mM Mn
Descriptor: 10MER DNA, 5'-D(*GP*AP*CP*GP*TP*TP*CP*TP*GP*AP)-3', 14MER DNA, ...
Authors:Molina, R, Redondo, P, LopezMendez, B, Villate, M, Merino, N, Blanco, F.J, Valton, J, Grizot, S, Duchateau, P, Prieto, J, Montoya, G.
Deposit date:2015-07-02
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Homing Endonuclease I-Cvui Provides a New Template for Genome Modification
J.Biol.Chem., 290, 2015
5A77
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Crystal structure of the homing endonuclease I-CvuI in complex with I- CreI target (C1221) in the presence of 2 mM Mg revealing DNA cleaved
Descriptor: 10MER DNA, 5'-D(*GP*AP*CP*GP*TP*TP*TP*TP* GP*AP*DGP*AP*CP*GP*TP*TP*TP*TP*GP*A)-3', 14MER DNA, ...
Authors:Molina, R, Redondo, P, LopezMendez, B, Villate, M, Merino, N, Blanco, F.J, Valton, J, Grizot, S, Duchateau, P, Prieto, J, Montoya, G.
Deposit date:2015-07-03
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Homing Endonuclease I-Cvui Provides a New Template for Genome Modification
J.Biol.Chem., 290, 2015
5A0M
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BU of 5a0m by Molmil
THE CRYSTAL STRUCTURE OF I-SCEI IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF MN
Descriptor: 5'-D(*CP*AP*CP*GP*CP*TP*AP*GP*GP*GP*AP*TP*AP*AP)-3', 5'-D(*CP*AP*GP*GP*GP*TP*AP*AP*TP*AP*CP)-3', 5'-D(*CP*CP*CP*TP*AP*GP*CP*GP*TP)-3', ...
Authors:Prieto, J, Redondo, P, Merino, N, Villate, M, Blanco, F.J, Molina, R.
Deposit date:2015-04-21
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the I-Scei Nuclease Complexed with its DsDNA Target and Three Catalytic Metal Ions.
Acta Crystallogr.,Sect.F, 72, 2016
5A72
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Crystal structure of the homing endonuclease I-CvuI in complex with its target (Sro1.3) in the presence of 2 mM Ca
Descriptor: 24MER DNA, 5'-D(*DTP*CP*AP*GP*AP*AP*CP*GP*TP*CP*GP*TP*AP *DCP*GP*AP*CP*GP*TP*TP*CP*TP*GP*A)-3', CALCIUM ION, ...
Authors:Molina, R, Redondo, P, LopezMendez, B, Villate, M, Merino, N, Blanco, F.J, Valton, J, Grizot, S, Duchateau, P, Prieto, J, Montoya, G.
Deposit date:2015-07-02
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the Homing Endonuclease I-Cvui Provides a New Template for Genome Modification
J.Biol.Chem., 290, 2015
5A78
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BU of 5a78 by Molmil
Crystal structure of the homing endonuclease I-CvuI in complex with I- CreI target (C1221) in the presence of 2 mM Mg revealing DNA not cleaved
Descriptor: 24MER DNA, 5'-D(*TP*CP*AP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP *CP*GP*AP*CP*GP*TP*TP*TP*TP*GP*A)-3', DNA ENDONUCLEASE I-CVUI, ...
Authors:Molina, R, Redondo, P, LopezMendez, B, Villate, M, Merino, N, Blanco, F.J, Valton, J, Grizot, S, Duchateau, P, Prieto, J, Montoya, G.
Deposit date:2015-07-03
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Homing Endonuclease I-Cvui Provides a New Template for Genome Modification
J.Biol.Chem., 290, 2015
2JA4
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BU of 2ja4 by Molmil
Crystal structure of CD5 domain III reveals the fold of a group B scavenger cysteine-rich receptor
Descriptor: T-CELL SURFACE GLYCOPROTEIN CD5
Authors:Rodamilans, B, Munoz, I.G, Sarrias, M.R, Lozano, F, Blanco, F.J, Montoya, G.
Deposit date:2006-11-21
Release date:2007-03-06
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal Structure of the Third Extracellular Domain of Cd5 Reveals the Fold of a Group B Scavenger Cysteine-Rich Receptor Domain.
J.Biol.Chem., 282, 2007
2VNF
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BU of 2vnf by Molmil
MOLECULAR BASIS OF HISTONE H3K4ME3 RECOGNITION BY ING4
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, HISTONE H3, ...
Authors:Palacios, A, Munoz, I.G, Pantoja-Uceda, D, Marcaida, M.J, Torres, D, Martin-Garcia, J.M, Luque, I, Montoya, G, Blanco, F.J.
Deposit date:2008-02-04
Release date:2008-04-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Molecular Basis of Histone H3K4Me3 Recognition by Ing4
J.Biol.Chem., 283, 2008
2O7M
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BU of 2o7m by Molmil
The C-terminal loop of the homing endonuclease I-CreI is essential for DNA binding and cleavage. Identification of a novel site for specificity engineering in the I-CreI scaffold
Descriptor: DNA endonuclease I-CreI
Authors:Prieto, J, Redondo, P, Padro, D, Blanco, F.J, Paques, F, Montoya, G.
Deposit date:2006-12-11
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:The C-terminal loop of the homing endonuclease I-CreI is essential for site recognition, DNA binding and cleavage
Nucleic Acids Res., 35, 2007
2JTO
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BU of 2jto by Molmil
Solution Structure of Tick Carboxypeptidase Inhibitor
Descriptor: Carboxypeptidase inhibitor
Authors:Pantoja-Uceda, D, Blanco, F.J.
Deposit date:2007-08-03
Release date:2008-07-15
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:The NMR structure and dynamics of the two-domain tick carboxypeptidase inhibitor reveal flexibility in its free form and stiffness upon binding to human carboxypeptidase B.
Biochemistry, 47, 2008
2K1J
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BU of 2k1j by Molmil
Plan homeodomain finger of tumour supressor ING4
Descriptor: Inhibitor of growth protein 4, ZINC ION
Authors:Palacios, A, Garcia, P, Padro, D, Lopez-Hernandez, E, Blanco, F.J.
Deposit date:2008-03-05
Release date:2008-04-15
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure and NMR characterization of the binding to methylated histone tails of the plant homeodomain finger of the tumour suppressor ING4.
Febs Lett., 580, 2006
2KG4
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BU of 2kg4 by Molmil
Three-dimensional structure of human Gadd45alpha in solution by NMR
Descriptor: Growth arrest and DNA-damage-inducible protein GADD45 alpha
Authors:Sanchez, R, Pantoja-Uceda, D, Prieto, J, Diercks, T, Campos-Olivas, R, Blanco, F.J.
Deposit date:2009-03-04
Release date:2009-03-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of human growth arrest and DNA damage 45alpha (Gadd45alpha) and its interactions with proliferating cell nuclear antigen (PCNA) and Aurora A kinase
J.Biol.Chem., 285, 2010
2KPZ
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BU of 2kpz by Molmil
Human NEDD4 3RD WW Domain Complex with The Human T-cell Leukemia virus 1 GAG-Pro poliprotein Derived Peptide SDPQIPPPYVEP
Descriptor: 12-mer from Gag-Pro polyprotein, E3 ubiquitin-protein ligase NEDD4
Authors:Iglesias-Bexiga, M, Macias, M, Bonet, R, Blanco, F.J, Cobos, E.S, Luque, I.
Deposit date:2009-10-23
Release date:2010-11-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Human NEDD4 3RD WW Domain Complex with Human T-cell Leukemia virus GAP-Pro Poliprotein Derived Peptide
To be Published
2KQ0
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BU of 2kq0 by Molmil
Human NEDD4 3rd WW Domain Complex with Ebola Zaire Virus Matrix Protein VP40 Derived Peptide ILPTAPPEYMEA
Descriptor: 12-mer from Matrix protein VP40, E3 ubiquitin-protein ligase NEDD4
Authors:Iglesias-Bexiga, M, Macias, M, Bonet, R, Blanco, F.J, Cobos, E.S, Luque, I.
Deposit date:2009-10-23
Release date:2010-11-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Human NEDD4 3rd WW Domain Complex with Ebola Zaire Virus Matrix Protein VP40 Derived Peptide
To be Published
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