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PDB: 107 results

8BJP
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BU of 8bjp by Molmil
The N288D mutant cytoplasmic PAS domain of Geobacillus thermodenitrificans histidine kinase CitA
Descriptor: MAGNESIUM ION, cytoplasmic PAS domain of CitA from Geobacillus thermodenitrificans
Authors:Becker, S.
Deposit date:2022-11-04
Release date:2023-11-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The N288D mutant cytoplasmic PAS domain of Geobacillus thermodenitrificans histidine kinase CitA
To Be Published
8BGB
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BU of 8bgb by Molmil
Structure of the citrate-bound extracytoplasmic PAS domain of histidine kinase CitA from Geobacillus thermodenitrificans
Descriptor: CITRATE ANION, Histidine kinase, SODIUM ION
Authors:Becker, S.
Deposit date:2022-10-27
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the citrate-bound extracytoplasmic PAS domain of histidine kinase CitA from Geobacillus thermodenitrificans
To Be Published
8BIY
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BU of 8biy by Molmil
Citrate-free extracytoplasmic PAS domain mutant R93A of sensor histidine kinase CitA from Geobacillus thermodenitrificans
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, Histidine kinase, ...
Authors:Becker, S.
Deposit date:2022-11-02
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Citrate-free extracytoplasmic PAS domain mutant R93A of sensor histidine kinase CitA from Geobacillus thermodenitrificans
To Be Published
5C58
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A double mutant of serratia marcescens hemophore receptor HasR in complex with its hemophore HasA and heme
Descriptor: HasR protein, Hemophore HasA, PROTOPORPHYRIN IX CONTAINING FE
Authors:Becker, S, Diederichs, K, Welte, W.
Deposit date:2015-06-19
Release date:2016-06-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.795 Å)
Cite:Binding of HasA by its transmembrane receptor HasR follows a conformational funnel mechanism.
Eur.Biophys.J., 49, 2020
7OOJ
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BU of 7ooj by Molmil
Structure of D-Thr53 Ubiquitin
Descriptor: CADMIUM ION, Ubiquitin
Authors:Becker, S.
Deposit date:2021-05-27
Release date:2022-05-18
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A litmus test for classifying recognition mechanisms of transiently binding proteins.
Nat Commun, 13, 2022
1BG1
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BU of 1bg1 by Molmil
TRANSCRIPTION FACTOR STAT3B/DNA COMPLEX
Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*TP*TP*CP*CP*CP*GP*TP*AP*AP*AP*TP*CP*T)-3'), PROTEIN (TRANSCRIPTION FACTOR STAT3B)
Authors:Becker, S, Groner, B, Muller, C.W.
Deposit date:1998-06-03
Release date:1999-01-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Three-dimensional structure of the Stat3beta homodimer bound to DNA.
Nature, 394, 1998
6FCG
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BU of 6fcg by Molmil
Crystal structure of an endo-laminarinase from Formosa Hel1_33_131
Descriptor: CALCIUM ION, Glycoside hydrolase, GH17 family
Authors:Becker, S, Robb, C.S, Hehemann, J.H.
Deposit date:2017-12-20
Release date:2018-12-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Adaptive mechanisms that provide competitive advantages to marine bacteroidetes during microalgal blooms.
ISME J, 12, 2018
6EHM
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BU of 6ehm by Molmil
Model of the Ebola virus nucleocapsid subunit from recombinant virus-like particles
Descriptor: Membrane-associated protein VP24, Nucleoprotein
Authors:Wan, W, Kolesnikova, L, Clarke, M, Koehler, A, Noda, T, Becker, S, Briggs, J.A.G.
Deposit date:2017-09-13
Release date:2017-11-08
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (7.3 Å)
Cite:Structure and assembly of the Ebola virus nucleocapsid.
Nature, 551, 2017
2W0N
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BU of 2w0n by Molmil
Plasticity of PAS domain and potential role for signal transduction in the histidine-kinase DcuS
Descriptor: SENSOR PROTEIN DCUS
Authors:Etzkorn, M, Kneuper, H, Duennwald, P, Vijayan, V, Kraemer, J, Griesinger, C, Becker, S, Unden, G, Baldus, M.
Deposit date:2008-08-19
Release date:2008-09-30
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Plasticity of the Pas Domain and a Potential Role for Signal Transduction in the Histidine Kinase Dcus.
Nat.Struct.Mol.Biol., 15, 2008
5NWM
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BU of 5nwm by Molmil
Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6
Descriptor: Nuclear receptor coactivator 1, Signal transducer and activator of transcription 6
Authors:Russo, L, Becker, S, Griesinger, C.
Deposit date:2017-05-06
Release date:2017-12-06
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6.
Sci Rep, 7, 2017
4UN2
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BU of 4un2 by Molmil
Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin
Descriptor: UBIQUITIN, UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2
Authors:Michielssens, S, Peters, J.H, Ban, D, Pratihar, S, Seeliger, D, Sharma, M, Giller, K, Sabo, T.M, Becker, S, Lee, D, Griesinger, C, de Groot, B.L.
Deposit date:2014-05-23
Release date:2014-08-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:A Designed Conformational Shift to Control Protein Binding Specificity.
Angew.Chem.Int.Ed.Engl., 53, 2014
5JDP
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BU of 5jdp by Molmil
E73V mutant of the human voltage-dependent anion channel
Descriptor: Voltage-dependent anion-selective channel protein 1
Authors:Jaremko, M, Jaremko, L, Villinger, S, Schmidt, C, Giller, K, Griesinger, C, Becker, S, Zweckstetter, M.
Deposit date:2016-04-17
Release date:2016-08-10
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:High-Resolution NMR Determination of the Dynamic Structure of Membrane Proteins.
Angew.Chem.Int.Ed.Engl., 55, 2016
2I8B
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BU of 2i8b by Molmil
Crystal structure of the C-terminal domain of Ebola virus VP30
Descriptor: Minor nucleoprotein VP30
Authors:Muziol, T.M, Hartlieb, B, Becker, S, Weissenhorn, W.
Deposit date:2006-09-01
Release date:2007-01-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the C-terminal domain of Ebola virus VP30 reveals a role in transcription and nucleocapsid association.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2J86
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BU of 2j86 by Molmil
Structural analysis of the PP2C Family Phosphatase tPphA of Thermosynechococcus elongatus
Descriptor: MAGNESIUM ION, PROTEIN SERINE-THREONINE PHOSPHATASE
Authors:Schlicker, C, Kloft, N, Forchhammer, K, Becker, S.
Deposit date:2006-10-19
Release date:2007-11-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural Analysis of the Pp2C Phosphatase Tppha from Thermosynechococcus Elongatus: A Flexible Flap Subdomain Controls Access to the Catalytic Site.
J.Mol.Biol., 376, 2008
7F1M
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BU of 7f1m by Molmil
Marburg virus nucleoprotein-RNA complex
Descriptor: Nucleoprotein, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3')
Authors:Fujita, F.Y, Sugita, Y, Takamatsu, Y, Houri, K, Muramoto, Y, Nakano, M, Tsunoda, Y, Igarashi, M, Becker, S, Noda, T.
Deposit date:2021-06-09
Release date:2022-03-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insight into Marburg virus nucleoprotein-RNA complex formation.
Nat Commun, 13, 2022
2J6D
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BU of 2j6d by Molmil
CONKUNITZIN-S2 - CONE SNAIL NEUROTOXIN - DENOVO STRUCTURE
Descriptor: CONKUNITZIN-S2
Authors:Korukottu, J, Bayrhuber, M, Montaville, P, Vijayan, V, Jung, Y.-S, Becker, S, Zweckstetter, M.
Deposit date:2006-09-27
Release date:2007-01-16
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Fast High-Resolution Protein Structure Determination by Using Unassigned NMR Data.
Angew.Chem.Int.Ed.Engl., 46, 2007
5FQ1
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BU of 5fq1 by Molmil
Structure of the cytoplasmic PAS domain of the Geobacillus thermodenitrificans histidine kinase CitA
Descriptor: GLYCEROL, HISTIDINE KINASE, PHOSPHATE ION
Authors:Schomburg, B, Giller, K, Becker, S.
Deposit date:2015-12-03
Release date:2017-01-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Cryogenic optical localization provides 3D protein structure data with Angstrom resolution.
Nat. Methods, 14, 2017
8VCI
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BU of 8vci by Molmil
SARS-CoV-2 Frameshift Stimulatory Element with Upstream Multibranch Loop
Descriptor: Frameshift Stimulatory Element with Upstream Multi-branch Loop
Authors:Peterson, J.M, Becker, S.T, O'Leary, C.A, Juneja, P, Yang, Y, Moss, W.N.
Deposit date:2023-12-14
Release date:2024-01-17
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Structure of the SARS-CoV-2 Frameshift Stimulatory Element with an Upstream Multibranch Loop.
Biochemistry, 63, 2024
2Y8I
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BU of 2y8i by Molmil
Structural basis for the allosteric interference of myosin function by mutants G680A and G680V of Dictyostelium myosin-2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MYOSIN-2 HEAVY CHAIN
Authors:Preller, M, Bauer, S, Adamek, N, Fujita-Becker, S, Fedorov, R, Geeves, M.A, Manstein, D.J.
Deposit date:2011-02-07
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.132 Å)
Cite:Structural Basis for the Allosteric Interference of Myosin Function by Reactive Thiol Region Mutations G680A and G680V.
J.Biol.Chem., 286, 2011
2Y9E
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BU of 2y9e by Molmil
Structural basis for the allosteric interference of myosin function by mutants G680A and G680V of Dictyostelium myosin-2
Descriptor: MYOSIN-2
Authors:Preller, M, Bauer, S, Adamek, N, Fujita-Becker, S, Fedorov, R, Geeves, M.A, Manstein, D.J.
Deposit date:2011-02-14
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.397 Å)
Cite:Structural Basis for the Allosteric Interference of Myosin Function by Reactive Thiol Region Mutations G680A and G680V.
J.Biol.Chem., 286, 2011
5NWX
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BU of 5nwx by Molmil
Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6
Descriptor: Nuclear receptor coactivator 1, Signal transducer and activator of transcription 6
Authors:Russo, L, Giller, K, Pfitzner, E, Griesinger, C, Becker, S.
Deposit date:2017-05-08
Release date:2017-12-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6.
Sci Rep, 7, 2017
2Y0R
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BU of 2y0r by Molmil
Structural basis for the allosteric interference of myosin function by mutants G680A and G680V of Dictyostelium myosin-2
Descriptor: MYOSIN-2 HEAVY CHAIN
Authors:Preller, M, Bauer, S, Adamek, N, Fujita-Becker, S, Fedorov, R, Geeves, M.A, Manstein, D.J.
Deposit date:2010-12-07
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural Basis for the Allosteric Interference of Myosin Function by Reactive Thiol Region Mutations G680A and G680V.
J.Biol.Chem., 286, 2011
1G8X
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STRUCTURE OF A GENETICALLY ENGINEERED MOLECULAR MOTOR
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MYOSIN II HEAVY CHAIN FUSED TO ALPHA-ACTININ 3
Authors:Kliche, W, Fujita-Becker, S, Kollmar, M, Manstein, D.J, Kull, F.J.
Deposit date:2000-11-21
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a genetically engineered molecular motor.
EMBO J., 20, 2001
8OWJ
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BU of 8owj by Molmil
Lipidic amyloid-beta(1-40) fibril - polymorph L2-L2
Descriptor: Amyloid-beta A4 protein
Authors:Frieg, B, Han, M, Giller, K, Dienemann, C, Riedel, D, Becker, S, Andreas, L.B, Griesinger, C, Schroeder, G.F.
Deposit date:2023-04-28
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Cryo-EM structures of lipidic fibrils of amyloid-beta (1-40).
Nat Commun, 15, 2024
8OVM
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BU of 8ovm by Molmil
Lipidic amyloid-beta(1-40) fibril - polymorph L2
Descriptor: Amyloid-beta A4 protein
Authors:Frieg, B, Han, M, Giller, K, Dienemann, C, Riedel, D, Becker, S, Andreas, L.B, Griesinger, C, Schroeder, G.F.
Deposit date:2023-04-26
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Cryo-EM structures of lipidic fibrils of amyloid-beta (1-40).
Nat Commun, 15, 2024

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