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PDB: 215 件

6WR4
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Structure of human ATG9A, the only transmembrane protein of the core autophagy machinery
分子名称: Autophagy-related protein 9A, Lauryl Maltose Neopentyl Glycol
著者Guardia, C.M, Tan, X, Lian, T, Rana, M.S, Zhou, W, Christenson, E.T, Lowry, A.J, Faraldo-Gomez, J.D, Bonifacino, J.S, Jiang, J, Banerjee, A.
登録日2020-04-29
公開日2020-07-08
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of Human ATG9A, the Only Transmembrane Protein of the Core Autophagy Machinery.
Cell Rep, 31, 2020
6U00
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Crystal Structure of Fungal RNA Kinase
分子名称: PHOSPHATE ION, tRNA ligase
著者Shuman, S, Goldgur, Y, Banerjee, A.
登録日2019-08-13
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.981 Å)
主引用文献Atomic structures of the RNA end-healing 5'-OH kinase and 2',3'-cyclic phosphodiesterase domains of fungal tRNA ligase: conformational switches in the kinase upon binding of the GTP phosphate donor.
Nucleic Acids Res., 47, 2019
6TZM
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Crystal Structure of Fungal RNA Kinase
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, tRNA ligase
著者Shuman, S, Goldgur, Y, Banerjee, A.
登録日2019-08-12
公開日2019-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.714 Å)
主引用文献Atomic structures of the RNA end-healing 5'-OH kinase and 2',3'-cyclic phosphodiesterase domains of fungal tRNA ligase: conformational switches in the kinase upon binding of the GTP phosphate donor.
Nucleic Acids Res., 47, 2019
6A1Q
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Crystal structures of disordered Z-type helices
分子名称: DNA (5'-D(P*CP*AP*CP*A)-3'), DNA (5'-D(P*TP*GP*TP*G)-3')
著者Karthik, S, Mandal, P.K, Thirugnanasambandam, A, Gautham, N.
登録日2018-06-07
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Crystal structures of disordered Z-type helices.
Nucleosides Nucleotides Nucleic Acids, 38, 2019
5IYE
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Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
分子名称: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3'), ZINC ION
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-03-24
公開日2017-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.694 Å)
主引用文献Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
5IYG
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Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
分子名称: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3')
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-03-24
公開日2017-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
5IYJ
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Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
分子名称: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3')
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-03-24
公開日2017-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
5ZHP
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M3 muscarinic acetylcholine receptor in complex with a selective antagonist
分子名称: (1R,2R,4S,5S,7s)-7-({[4-fluoro-2-(thiophen-2-yl)phenyl]carbamoyl}oxy)-9,9-dimethyl-3-oxa-9-azatricyclo[3.3.1.0~2,4~]nonan-9-ium, CITRIC ACID, HEXAETHYLENE GLYCOL, ...
著者Liu, H, Hofmann, J, Fish, I, Schaake, B, Eitel, K, Bartuschat, A, Kaindl, J, Rampp, H, Banerjee, A, Hubner, H, Clark, M.J, Vincent, S.G, Fisher, J, Heinrich, M, Hirata, K, Liu, X, Sunahara, R.K, Shoichet, B.K, Kobilka, B.K, Gmeiner, P.
登録日2018-03-13
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure-guided development of selective M3 muscarinic acetylcholine receptor antagonists
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5WV7
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Crystal structure of d(CCGGGGTACCCCGG)2 at 1.4A resolution
分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*GP*TP*AP*CP*CP*CP*CP*GP*G)-3')
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-12-22
公開日2017-05-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.406 Å)
主引用文献Crystal structure of d(CCGGGGTACCCCGG)2 at 1.4 angstrom resolution.
Acta Crystallogr F Struct Biol Commun, 73, 2017
6BK9
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Crystal Structure of Squid Arrestin
分子名称: CHLORIDE ION, Visual arrestin
著者Eger, B.T, Bandyopadhyay, A, Yedidi, R.S, Ernst, O.P.
登録日2017-11-08
公開日2018-09-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.00005579 Å)
主引用文献A Novel Polar Core and Weakly Fixed C-Tail in Squid Arrestin Provide New Insight into Interaction with Rhodopsin.
J. Mol. Biol., 430, 2018
6BMM
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Structure of human DHHC20 palmitoyltransferase, space group P21
分子名称: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S,5S)-hexane-2,5-diol, PHOSPHATE ION, ...
著者Rana, M.S, Lee, C.-J, Banerjee, A.
登録日2017-11-15
公開日2018-01-24
最終更新日2018-03-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Fatty acyl recognition and transfer by an integral membraneS-acyltransferase.
Science, 359, 2018
2LS5
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Solution structure of a putative protein disulfide isomerase from Bacteroides thetaiotaomicron
分子名称: Uncharacterized protein
著者Harris, R, Bandaranayake, A.D, Banu, R, Bonanno, J.B, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chaparro, R, Evans, B, Garforth, S, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Lim, S, Love, J, Matikainen, B, Patel, H, Seidel, R.D, Smith, B, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2012-04-20
公開日2012-05-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a putative protein disulfide isomerase from Bacteroides thetaiotaomicron
To be Published
2LRN
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Solution structure of a thiol:disulfide interchange protein from Bacteroides sp.
分子名称: Thiol:disulfide interchange protein
著者Harris, R, Bandaranayake, A.D, Banu, R, Bonanno, J.B, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chaparro, R, Evans, B, Garforth, S, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Lim, S, Love, J, Matikainen, B, Patel, H, Seidel, R.D, Smith, B, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2012-04-10
公開日2012-04-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a thiol:disulfide interchange protein from Bacteroides sp.
To be Published
2LST
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Solution structure of a thioredoxin from Thermus thermophilus
分子名称: Thioredoxin
著者Harris, R, Bandaranayake, A.D, Banu, R, Bonanno, J.B, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chaparro, R, Evans, B, Garforth, S, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Lim, S, Love, J, Matikainen, B, Patel, H, Seidel, R.D, Smith, B, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2012-05-04
公開日2012-05-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a thioredoxin from Thermus thermophilus
To be Published
6E3A
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tRNA 2'-phosphotransferase
分子名称: COENZYME A, Probable RNA 2'-phosphotransferase, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate
著者Shuman, S, Goldgur, Y, Banerjee, A.
登録日2018-07-13
公開日2019-03-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure of tRNA splicing enzyme Tpt1 illuminates the mechanism of RNA 2'-PO4recognition and ADP-ribosylation.
Nat Commun, 10, 2019
5YPP
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Crystal structure of IlvN.Val-1a
分子名称: ACETATE ION, Acetolactate synthase isozyme 1 small subunit, DI(HYDROXYETHYL)ETHER, ...
著者Sarma, S.P, Bansal, A, Schindelin, H, Demeler, B.
登録日2017-11-02
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic Structures of IlvN·Val/Ile Complexes: Conformational Selectivity for Feedback Inhibition of Aceto Hydroxy Acid Synthases.
Biochemistry, 58, 2019
7JNO
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BU of 7jno by Molmil
X-ray crystallographic structure of the NS3 helicase domain from Tick-borne encephalitis virus
分子名称: Serine protease NS3
著者Weeks, S.D, Munwar, A, Lucero, H.A, Bandara, A, Munawar, A.H.
登録日2020-08-05
公開日2020-08-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of Tickborne Encephalitis Virus NS3-Helicase and implications for drug design
To Be Published
8A28
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Structure of the astacin zymogen of LAST-MAM from Limulus polyphemus
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, MAGNESIUM ION, ...
著者Guevara, T, Rodriguez Banqueri, A.
登録日2022-06-02
公開日2022-10-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Zymogenic latency in an ∼250-million-year-old astacin metallopeptidase.
Acta Crystallogr D Struct Biol, 78, 2022
1AXL
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SOLUTION CONFORMATION OF THE (-)-TRANS-ANTI-[BP]DG ADDUCT OPPOSITE A DELETION SITE IN DNA DUPLEX D(CCATC-[BP]G-CTACC)D(GGTAG--GATGG), NMR, 6 STRUCTURES
分子名称: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, DNA DUPLEX D(CCATC-[BP]G-CTACC)D(GGTAG--GATGG)
著者Feng, B, Gorin, A.A, Kolbanovskiy, A, Hingerty, B.E, Geacintov, N.E, Broyde, S, Patel, D.J.
登録日1997-10-16
公開日1998-07-01
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution conformation of the (-)-trans-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the minor groove.
Biochemistry, 36, 1997
7BML
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BU of 7bml by Molmil
Crystal structure of outer surface protein C (OspC) from Borrelia burgdorferi
分子名称: Outer surface protein C
著者Sliwiak, J, Bierwagen, P, Ruszkowski, M, Jaskolski, M, Urbanowicz, A.
登録日2021-01-20
公開日2021-02-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural studies of outer surface proteins (OspC) from different Borrelia strains
To Be Published
6CMV
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BU of 6cmv by Molmil
Crystal structure of Archaeal Biofilm Regulator (AbfR2) from Sulfolobus acidocaldarius
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Transcriptional regulator Lrs14-like protein
著者Essen, L.-O, Vogt, M.S, Banerjee, A.
登録日2018-03-06
公開日2018-11-14
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of an Lrs14-like archaeal biofilm regulator from Sulfolobus acidocaldarius.
Acta Crystallogr D Struct Biol, 74, 2018
8A9T
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Tubulin-[1,2]oxazoloisoindole-1 complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
著者Prota, A.E, Abel, A.-C, Steinmetz, M.O, Barraja, P, Montalbano, A, Spano, V.
登録日2022-06-29
公開日2022-11-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Development of [1,2]oxazoloisoindoles tubulin polymerization inhibitors: Further chemical modifications and potential therapeutic effects against lymphomas.
Eur.J.Med.Chem., 243, 2022
8A9Z
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Tubulin-[1,2]oxazoloisoindole-2e complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 7-[(3,5-dimethoxyphenyl)methyl]pyrrolo[3,4-g][1,2]benzoxazole, CALCIUM ION, ...
著者Prota, A.E, Abel, A.-C, Steinmetz, M.O, Barraja, P, Montalbano, A, Spano, V.
登録日2022-06-29
公開日2022-11-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.294 Å)
主引用文献Development of [1,2]oxazoloisoindoles tubulin polymerization inhibitors: Further chemical modifications and potential therapeutic effects against lymphomas.
Eur.J.Med.Chem., 243, 2022
6BMN
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Structure of human DHHC20 palmitoyltransferase, space group P63
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, ZINC ION, ...
著者Rana, M.S, Lee, C.-J, Banerjee, A.
登録日2017-11-15
公開日2018-01-24
最終更新日2018-03-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Fatty acyl recognition and transfer by an integral membraneS-acyltransferase.
Science, 359, 2018
6BML
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Structure of human DHHC20 palmitoyltransferase, irreversibly inhibited by 2-bromopalmitate
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE, PALMITIC ACID, PHOSPHATE ION, ...
著者Rana, M.S, Lee, C.-J, Banerjee, A.
登録日2017-11-15
公開日2018-01-24
最終更新日2018-03-28
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Fatty acyl recognition and transfer by an integral membraneS-acyltransferase.
Science, 359, 2018

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