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PDB: 189 results

6VRP
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BU of 6vrp by Molmil
Reverse Transcriptase Diabody with R83T Mutation
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Single-chain Fv
Authors:Chesterman, C, Arnold, E.
Deposit date:2020-02-08
Release date:2021-02-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.
Structure, 29, 2021
6VUN
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BU of 6vun by Molmil
Reverse Transcriptase Diabody with R83C Mutation
Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, Single-chain Fv
Authors:Chesterman, C, Arnold, E.
Deposit date:2020-02-16
Release date:2021-02-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.
Structure, 29, 2021
6VUO
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BU of 6vuo by Molmil
Reverse Transcriptase Diabody with S82bC/R83T Mutation
Descriptor: 1,2-ETHANEDIOL, Single-chain Fv
Authors:Chelsy, C, Arnold, E.
Deposit date:2020-02-16
Release date:2021-02-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.
Structure, 29, 2021
6VUG
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BU of 6vug by Molmil
Diabody bound to a Reverse Transcriptase Aptamer Complex
Descriptor: DNA (38-MER), GLYCEROL, Heavy chain variable fragment, ...
Authors:Chesterman, C, Arnold, E.
Deposit date:2020-02-15
Release date:2021-02-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.
Structure, 29, 2021
6VUP
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BU of 6vup by Molmil
Reverse Transcriptase Diabody with R83T/E85C Mutations
Descriptor: 1,2-ETHANEDIOL, Single-chain Fv
Authors:Chesterman, C, Arnold, E.
Deposit date:2020-02-16
Release date:2021-02-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.
Structure, 29, 2021
1IHN
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BU of 1ihn by Molmil
MT938
Descriptor: CHLORIDE ION, hypothetical protein MTH938
Authors:Das, K, Montelione, G.T, Arnold, E, Northeast Structural Genomics Consortium (NESG)
Deposit date:2001-04-19
Release date:2001-05-16
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystal structure of MTH938 from Methanobacterium thermoautotrophicum at 2.2 A resolution reveals a novel tertiary protein fold.
Proteins, 45, 2001
1QE1
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BU of 1qe1 by Molmil
CRYSTAL STRUCTURE OF 3TC-RESISTANT M184I MUTANT OF HIV-1 REVERSE TRANSCRIPTASE
Descriptor: REVERSE TRANSCRIPTASE, SUBUNIT P51, SUBUNIT P66
Authors:Sarafianos, S.G, Das, K, Ding, J, Hughes, S.H, Arnold, E.
Deposit date:1999-07-12
Release date:1999-08-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Lamivudine (3TC) resistance in HIV-1 reverse transcriptase involves steric hindrance with beta-branched amino acids.
Proc.Natl.Acad.Sci.USA, 96, 1999
5HLF
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BU of 5hlf by Molmil
STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE In COMPLEX WITH A 38-MER HAIRPIN TEMPLATE-PRIMER DNA APTAMER AND AN ALPHA-CARBOXYPHOSPHONATE INHIBITOR
Descriptor: DNA (38-MER), GLYCEROL, HIV-1 REVERSE TRANSCRIPTASE P51 SUBUNIT, ...
Authors:Das, K, Arnold, E.
Deposit date:2016-01-15
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Exploring the role of the alpha-carboxyphosphonate moiety in the HIV-RT activity of alpha-carboxy nucleoside phosphonates.
Org.Biomol.Chem., 14, 2016
5HRO
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BU of 5hro by Molmil
STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE In COMPLEX WITH A DNA aptamer and an Alpha-carboxy nucleoside phosphonate inhibitor (alpha-CNP)
Descriptor: DNA (38-MER), HIV-1 REVERSE TRANSCRIPTASE P51 SUBUNIT, HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT, ...
Authors:Das, K, Arnold, E.
Deposit date:2016-01-23
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Conformational States of HIV-1 Reverse Transcriptase for Nucleotide Incorporation vs Pyrophosphorolysis-Binding of Foscarnet.
Acs Chem.Biol., 11, 2016
5HP1
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BU of 5hp1 by Molmil
STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE In COMPLEX WITH A DNA aptamer and FOSCARNET, a Pyrophosphate analog
Descriptor: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE, DNA (38-MER), GLYCEROL, ...
Authors:Das, K, Arnold, E.
Deposit date:2016-01-19
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Conformational States of HIV-1 Reverse Transcriptase for Nucleotide Incorporation vs Pyrophosphorolysis-Binding of Foscarnet.
Acs Chem.Biol., 11, 2016
5I42
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BU of 5i42 by Molmil
Structure of HIV-1 Reverse Transcriptase in complex with a DNA aptamer, AZTTP, and CA(2+) ion
Descriptor: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (38-MER), ...
Authors:Das, K, Arnold, E.
Deposit date:2016-02-11
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Conformational States of HIV-1 Reverse Transcriptase for Nucleotide Incorporation vs Pyrophosphorolysis-Binding of Foscarnet.
Acs Chem.Biol., 11, 2016
7KBO
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BU of 7kbo by Molmil
Reverse Transcriptase Diabody with S82bC, R83T Mutations Crystallized in C2
Descriptor: 1,2-ETHANEDIOL, Single-chain scFv
Authors:Chesterman, C, Arnold, E.
Deposit date:2020-10-02
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.
Structure, 29, 2021
7KBM
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BU of 7kbm by Molmil
Reverse Transcriptase Diabody with R83C Mutation Crystallized in C2
Descriptor: Single-chain scFv
Authors:Chesterman, C, Arnold, E.
Deposit date:2020-10-02
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.
Structure, 29, 2021
7KBP
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BU of 7kbp by Molmil
Herceptin Diabody with R83T, E85C Mutations
Descriptor: GLYCEROL, Single-chain Fv
Authors:Chesterman, C, Arnold, E.
Deposit date:2020-10-02
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.
Structure, 29, 2021
4MQ9
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BU of 4mq9 by Molmil
Crystal structure of Thermus thermophilus RNA polymerase holoenzyme in complex with GE23077
Descriptor: (2Z)-2-methylbut-2-enoic acid, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Ho, M.X, Arnold, E, Ebright, R.H, Zhang, Y, Tuske, S.
Deposit date:2013-09-16
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides.
Elife, 3, 2014
7KSE
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BU of 7kse by Molmil
Crystal structure of Prototype Foamy Virus Protease-Reverse Transcriptase CSH mutant (selenomethionine-labeled)
Descriptor: CALCIUM ION, Peptidase A9/Reverse transcriptase/RNase H
Authors:Harrison, J.J.E.K, Das, K, Ruiz, F.X, Arnold, E.
Deposit date:2020-11-21
Release date:2021-08-11
Last modified:2021-09-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of a Retroviral Polyprotein: Prototype Foamy Virus Protease-Reverse Transcriptase (PR-RT).
Viruses, 13, 2021
7KSF
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BU of 7ksf by Molmil
Crystal structure of Prototype Foamy Virus Protease-Reverse Transcriptase (native)
Descriptor: CALCIUM ION, Protease/Reverse transcriptase/ribonuclease H
Authors:Harrison, J.J.E.K, Das, K, Ruiz, F.X, Arnold, E.
Deposit date:2020-11-21
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of a Retroviral Polyprotein: Prototype Foamy Virus Protease-Reverse Transcriptase (PR-RT).
Viruses, 13, 2021
7LQU
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BU of 7lqu by Molmil
Crystal Structure of HIV-1 RT in Complex with NBD-14075
Descriptor: Reverse transcriptase p51, Reverse transcriptase p66, SULFATE ION, ...
Authors:Losada, N, Ruiz, F.X, Gruber, K, Das, K, Arnold, E.
Deposit date:2021-02-15
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:HIV-1 gp120 Antagonists Also Inhibit HIV-1 Reverse Transcriptase by Bridging the NNRTI and NRTI Sites.
J.Med.Chem., 64, 2021
7LPX
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BU of 7lpx by Molmil
Crystal Structure of HIV-1 RT in Complex with NBD-14270
Descriptor: Reverse transcriptase p51, Reverse transcriptase p66, SULFATE ION, ...
Authors:Losada, N, Ruiz, F.X, Arnold, E.
Deposit date:2021-02-12
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:HIV-1 gp120 Antagonists Also Inhibit HIV-1 Reverse Transcriptase by Bridging the NNRTI and NRTI Sites.
J.Med.Chem., 64, 2021
7LPW
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BU of 7lpw by Molmil
Crystal Structure of HIV-1 RT in Complex with NBD-14189
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, Reverse transcriptase p51, ...
Authors:Losada, N, Ruiz, F.X, Arnold, E.
Deposit date:2021-02-12
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:HIV-1 gp120 Antagonists Also Inhibit HIV-1 Reverse Transcriptase by Bridging the NNRTI and NRTI Sites.
J.Med.Chem., 64, 2021
4OIP
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BU of 4oip by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077, ATP, and CMPcPP
Descriptor: (2Z)-2-methylbut-2-enoic acid, 5'-D(*CP*CP*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*G)-3', 5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3', ...
Authors:Zhang, Y, Ebright, R.H, Arnold, E.
Deposit date:2014-01-20
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides.
Elife, 3, 2014
7LRI
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BU of 7lri by Molmil
Structure of HIV-1 Reverse Transcriptase in complex with DNA, dTTP, and CA(2+) ion
Descriptor: CALCIUM ION, DNA/RNA (38-MER), GLYCEROL, ...
Authors:Hoang, A, Ruiz, F.X, Arnold, E.
Deposit date:2021-02-16
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural basis of HIV inhibition by L-nucleosides: Opportunities for drug development and repurposing.
Drug Discov Today, 27, 2022
7LRX
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BU of 7lrx by Molmil
Structure of HIV-1 Reverse Transcriptase in complex with DNA, L-dCTP, and CA(2+) ion
Descriptor: 4-amino-1-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-L-erythro-pentofuranosyl}pyrimidin-2(1H)-one, AMMONIUM ION, CALCIUM ION, ...
Authors:Hoang, A, Ruiz, F.X, Arnold, E.
Deposit date:2021-02-17
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of HIV inhibition by L-nucleosides: Opportunities for drug development and repurposing.
Drug Discov Today, 27, 2022
7LRY
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BU of 7lry by Molmil
Structure of HIV-1 Reverse Transcriptase in complex with DNA, (-)FTC-TP, and CA(2+) ion
Descriptor: AMMONIUM ION, CALCIUM ION, DNA/RNA (38-MER), ...
Authors:Hoang, A, Ruiz, F.X, Arnold, E.
Deposit date:2021-02-17
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis of HIV inhibition by L-nucleosides: Opportunities for drug development and repurposing.
Drug Discov Today, 27, 2022
7LRM
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BU of 7lrm by Molmil
Structure of HIV-1 Reverse Transcriptase in complex with DNA, dCTP, and CA(2+) ion
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA/RNA (38-MER), ...
Authors:Hoang, A, Ruiz, F.X, Arnold, E.
Deposit date:2021-02-16
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Structural basis of HIV inhibition by L-nucleosides: Opportunities for drug development and repurposing.
Drug Discov Today, 27, 2022

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