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PDB: 4046 results

6MD2
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BU of 6md2 by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and Arachidonic acid
Descriptor: 2-chloro-5-nitro-N-phenylbenzamide, ARACHIDONIC ACID, Peroxisome proliferator-activated receptor gamma
Authors:Shang, J, Kojetin, D.J.
Deposit date:2018-09-03
Release date:2019-01-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cooperative cobinding of synthetic and natural ligands to the nuclear receptor PPAR gamma.
Elife, 7, 2018
5YD0
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BU of 5yd0 by Molmil
Crystal structure of Schlafen 13 (SLFN13) N'-domain
Descriptor: Schlafen 8, ZINC ION
Authors:Yang, J.-Y, Gao, S.
Deposit date:2017-09-09
Release date:2018-03-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.182 Å)
Cite:Structure of Schlafen13 reveals a new class of tRNA/rRNA- targeting RNase engaged in translational control
Nat Commun, 9, 2018
6MD0
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BU of 6md0 by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Oleic Acid
Descriptor: OLEIC ACID, Peroxisome proliferator-activated receptor gamma
Authors:Shang, J, Kojetin, D.J.
Deposit date:2018-09-03
Release date:2019-01-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Cooperative cobinding of synthetic and natural ligands to the nuclear receptor PPAR gamma.
Elife, 7, 2018
6PFU
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BU of 6pfu by Molmil
rsEGFP2 with a chlorinated chromophore in the non-fluorescent off-state in a contracted unit cell
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.619 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
6PFR
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BU of 6pfr by Molmil
rsEGFP2 with a chlorinated chromophore in the fluorescent on-state
Descriptor: Green fluorescent protein
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
8WYE
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BU of 8wye by Molmil
Cryo-EM structure of DSR2-DSAD1 (partial) complex
Descriptor: Bacillus phage SPbeta DSAD1 protein, SIR2 family protein
Authors:Zhang, J.T, Jia, N, Liu, X.Y.
Deposit date:2023-10-30
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
8WYD
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BU of 8wyd by Molmil
Cryo-EM structure of DSR2-DSAD1 complex
Descriptor: Bacillus phage SPbeta DSAD1 protein, SIR2 family protein
Authors:Zhang, J.T, Jia, N, Liu, X.Y.
Deposit date:2023-10-30
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
8WY9
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BU of 8wy9 by Molmil
Cryo-EM structure of DSR2 apo (partial) complex
Descriptor: SIR2 family protein
Authors:Zhang, J.T, Jia, N, Liu, X.Y.
Deposit date:2023-10-30
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
5YL2
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BU of 5yl2 by Molmil
Crystal structure of T2R-TTL-Y28 complex
Descriptor: (E)-1-(5-methoxy-2,2-dimethyl-chromen-8-yl)-3-(4-methoxy-3-oxidanyl-phenyl)prop-2-en-1-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Yang, J.H, Yang, T, Wen, J.L, Chen, L.J.
Deposit date:2017-10-16
Release date:2018-04-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:The compound millepachine and its derivatives inhibit tubulin polymerization by irreversibly binding to the colchicine-binding site in beta-tubulin.
J. Biol. Chem., 2018
8WYC
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BU of 8wyc by Molmil
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ (partial) complex
Descriptor: Bacillus phage SPR Tube protein, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SIR2-like domain-containing protein
Authors:Zhang, J.T, Jia, N, Liu, X.Y.
Deposit date:2023-10-30
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
6HK6
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BU of 6hk6 by Molmil
Human RIOK2 bound to inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-naphthalen-2-yl-~{N}-pyridin-2-yl-ethanamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Wang, J, Krojer, T, Bountra, C, Edwards, A.M, Arrowsmith, C, Knapp, S, Elkins, J.M.
Deposit date:2018-09-05
Release date:2018-10-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of human RIOK2 bound to a specific inhibitor.
Open Biology, 9, 2019
8WYB
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BU of 8wyb by Molmil
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ complex
Descriptor: Bacillus phage SPR Tube protein, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SIR2-like domain-containing protein
Authors:Zhang, J.T, Jia, N, Liu, X.Y.
Deposit date:2023-10-30
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
8WY8
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BU of 8wy8 by Molmil
Cryo-EM structure of DSR2 apo complex
Descriptor: SIR2 family protein
Authors:Zhang, J.T, Jia, N, Liu, X.Y.
Deposit date:2023-10-30
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
6PFS
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BU of 6pfs by Molmil
rsEGFP2 with a chlorinated chromophore in the fluorescent on-state in a contracted unit cell
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
6PFT
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BU of 6pft by Molmil
rsEGFP2 with a chlorinated chromophore in the non-fluorescent off-state
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
5H3V
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BU of 5h3v by Molmil
Crystal structure of a Type IV Secretion System Component CagX in Helicobacter pylori
Descriptor: Cag8, DI(HYDROXYETHYL)ETHER, ISOPROPYL ALCOHOL
Authors:Zhang, J, Wu, Y, Zhao, Y, Sun, L, Keegan, R.M, Liu, Y, Isupov, M.N.
Deposit date:2016-10-27
Release date:2017-04-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the type IV secretion system component CagX from Helicobacter pylori
Acta Crystallogr F Struct Biol Commun, 73, 2017
8WYF
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BU of 8wyf by Molmil
Cryo-EM structure of DSR2-DSAD1-NAD+ (partial) complex
Descriptor: Bacillus phage SPbeta DSAD1 protein, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SIR2 family protein
Authors:Zhang, J.T, Jia, N, Liu, X.Y.
Deposit date:2023-10-30
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
1FPB
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BU of 1fpb by Molmil
CRYSTAL STRUCTURE OF THE NEUTRAL FORM OF FRUCTOSE 1,6-BISPHOSPHATASE COMPLEXED WITH REGULATORY INHIBITOR FRUCTOSE 2,6-BISPHOSPHATE AT 2.6-ANGSTROMS RESOLUTION
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, FRUCTOSE 1,6-BISPHOSPHATASE
Authors:Liang, J.Y, Huang, S, Zhang, Y, Ke, H, Lipscomb, W.N.
Deposit date:1992-02-03
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the neutral form of fructose 1,6-bisphosphatase complexed with regulatory inhibitor fructose 2,6-bisphosphate at 2.6-A resolution.
Proc.Natl.Acad.Sci.USA, 89, 1992
5WES
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BU of 5wes by Molmil
Crystal Structure H2-Dd with disulfide-linked 5mer peptide
Descriptor: Beta-2-microglobulin, GLYCINE, H-2 class I histocompatibility antigen, ...
Authors:Jiang, J.S, Natarajan, K, Boyd, L.F, Margulies, D.H.
Deposit date:2017-07-10
Release date:2017-10-18
Last modified:2017-12-13
Method:X-RAY DIFFRACTION (2.706 Å)
Cite:Crystal structure of a TAPBPR-MHC I complex reveals the mechanism of peptide editing in antigen presentation.
Science, 358, 2017
4EQG
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BU of 4eqg by Molmil
Crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from human complexed with Ala-AMS
Descriptor: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Histidine triad nucleotide-binding protein 1
Authors:Wang, J, Fang, P, Guo, M.
Deposit date:2012-04-18
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Side chain independent recognition of aminoacyl adenylates by the hint1 transcription suppressor.
J.Phys.Chem.B, 116, 2012
3JBV
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BU of 3jbv by Molmil
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Zhang, J, Pan, X.J, Yan, K.G, Sun, S, Gao, N, Sui, S.F.
Deposit date:2015-10-16
Release date:2016-01-27
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Mechanisms of ribosome stalling by SecM at multiple elongation steps
Elife, 4, 2015
8WYA
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BU of 8wya by Molmil
Cryo-EM structure of DSR2-tube complex
Descriptor: Bacillus phage SPbeta tube protein, SIR2 family protein
Authors:Zhang, J.T, Jia, N, Liu, X.Y.
Deposit date:2023-10-30
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
6CCP
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BU of 6ccp by Molmil
EFFECT OF ARGININE-48 REPLACEMENT ON THE REACTION BETWEEN CYTOCHROME C PEROXIDASE AND HYDROGEN PEROXIDE
Descriptor: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Wang, J, Miller, M.A, Kraut, J.
Deposit date:1993-06-07
Release date:1993-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Effect of arginine-48 replacement on the reaction between cytochrome c peroxidase and hydrogen peroxide.
Biochemistry, 32, 1993
8SBB
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BU of 8sbb by Molmil
Cryo-EM structure of FtAlkB
Descriptor: Alkane 1-monooxygenase, DODECANE, FE (III) ION, ...
Authors:Zhang, J, Feng, L.
Deposit date:2023-04-03
Release date:2023-04-26
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Structure and mechanism of the alkane-oxidizing enzyme AlkB.
Nat Commun, 14, 2023
6BWD
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BU of 6bwd by Molmil
3.7 angstrom cryoEM structure of truncated mouse TRPM7
Descriptor: CHOLESTEROL HEMISUCCINATE, MAGNESIUM ION, Transient receptor potential cation channel subfamily M member 7
Authors:Zhang, J, Li, Z, Duan, J, Li, J, Hulse, R.E, Santa-Cruz, A, Abiria, S.A, Krapivinsky, G, Clapham, D.E.
Deposit date:2017-12-14
Release date:2018-08-15
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the mammalian TRPM7, a magnesium channel required during embryonic development.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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