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PDB: 61 results

6WO9
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Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 1-diphosphoinositol pentakisphosphate (1-IP7) and Mg
Descriptor: (1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, ...
Authors:Zong, G.N, Wang, H.C, Shears, S.B.
Deposit date:2020-04-24
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.
Faseb J., 35, 2021
6WOG
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BU of 6wog by Molmil
Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-methylenebisphosphonate inositol pentakisphosphate (5-PCP-IP5)
Descriptor: Diphosphoinositol polyphosphate phosphohydrolase 1, Methylenebisphosphonate inositol pentakisphosphate, SULFATE ION
Authors:Zong, G.N, Wang, H.C, Shears, S.B.
Deposit date:2020-04-24
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.
Faseb J., 35, 2021
6WOE
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Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with inositol hexakisphosphate and Mg, presoaked with 5-IP7, Mg and Fluoride, soaking 10min in the absence of Fluoride.
Descriptor: CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Zong, G.N, Wang, H.C, Shears, S.B.
Deposit date:2020-04-24
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.
Faseb J., 35, 2021
6WO7
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BU of 6wo7 by Molmil
Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-Diphosphoinositol pentakisphosphate (5-IP7), Mg, and Fluoride ion
Descriptor: (1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, ...
Authors:Zong, G.N, Wang, H.C, Shears, S.B.
Deposit date:2020-04-24
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.
Faseb J., 35, 2021
6WOI
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BU of 6woi by Molmil
Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 1-Diphosphoinositol pentakisphosphate, Mg, and Fluoride ion, presoaked with 1,5-IP8, Mg and Fluoride for 30 seconds
Descriptor: (1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, ...
Authors:Zong, G.N, Wang, H.C, Shears, S.B.
Deposit date:2020-04-24
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.
Faseb J., 35, 2021
6WO8
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BU of 6wo8 by Molmil
Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-diphosphoinositol 1,3,4,6-tetrakisphosphate (5-PP-IP4), Mg, and Fluoride ion
Descriptor: (1r,2R,3S,4r,5R,6S)-4-hydroxy-2,3,5,6-tetrakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, ...
Authors:Zong, G.N, Wang, H.C, Shears, S.B.
Deposit date:2020-04-24
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.
Faseb J., 35, 2021
6WOA
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BU of 6woa by Molmil
Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 2-Diphosphoinositol pentakisphosphate (2-IP7), Mg, and Fluoride ion
Descriptor: (1s,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, ...
Authors:Zong, G.N, Wang, H.C, Shears, S.B.
Deposit date:2020-04-24
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.
Faseb J., 35, 2021
6WOD
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BU of 6wod by Molmil
Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with inositol hexakisphosphate and Mg, presoaked with 5-IP7, Mg and Fluoride, soaking 2min in the absence of Fluoride.
Descriptor: CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Zong, G.N, Wang, H.C, Shears, S.B.
Deposit date:2020-04-24
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.
Faseb J., 35, 2021
6WOF
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BU of 6wof by Molmil
Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with inositol hexakisphosphate and Mg, presoaked with 5-IP7, Mg and Fluoride, soaking 20min in the absence of Fluoride.
Descriptor: CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Zong, G.N, Wang, H.C, Shears, S.B.
Deposit date:2020-04-24
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.
Faseb J., 35, 2021
6WOB
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BU of 6wob by Molmil
Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 4-diphosphoinositol pentakisphosphate (4-IP7), Mg, and Fluoride ion
Descriptor: (1S,2R,3S,4S,5S,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, ...
Authors:Zong, G.N, Wang, H.C, Shears, B.S.
Deposit date:2020-04-24
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.
Faseb J., 35, 2021
6LYJ
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BU of 6lyj by Molmil
The crystal structure of SAUGI/EBVUDG complex
Descriptor: SAUGI, Uracil-DNA glycosylase
Authors:Liao, Y.T, Ko, T.P, Wang, H.C.
Deposit date:2020-02-14
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into the differential interactions between the DNA mimic protein SAUGI and two gamma herpesvirus uracil-DNA glycosylases.
Int.J.Biol.Macromol., 160, 2020
5JX5
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BU of 5jx5 by Molmil
GH6 Orpinomyces sp. Y102 enzyme
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Tsai, L.C, Huang, H.C.
Deposit date:2016-05-12
Release date:2017-05-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of GH6 Orpinomyces sp. Y102 CelC7 enzyme with exo- and endo- activity in a complex with cellobiose
Acta Crystallogr.,Sect.D, 2019
6LYV
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BU of 6lyv by Molmil
The crystal structure of SAUGI/KSHVUDG complex
Descriptor: SAUGI, Uracil-DNA glycosylase
Authors:Liao, Y.T, Ko, T.P, Wang, H.C.
Deposit date:2020-02-16
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insight into the differential interactions between the DNA mimic protein SAUGI and two gamma herpesvirus uracil-DNA glycosylases.
Int.J.Biol.Macromol., 160, 2020
5XVE
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BU of 5xve by Molmil
Crystal structure of human USP2 C276S mutant in complex with ubiquitin
Descriptor: Ubiquitin carboxyl-terminal hydrolase 2, Ubiquitin-40S ribosomal protein S27a, ZINC ION
Authors:Chou, C.Y, Tang, H.C.
Deposit date:2017-06-27
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:6-Thioguanine is a noncompetitive and slow binding inhibitor of human deubiquitinating protease USP2
Sci Rep, 8, 2018
6IDW
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BU of 6idw by Molmil
GH6 Orpinomyces sp. Y102 enzyme
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, GLYCEROL, ...
Authors:Tsai, L.C, Huang, H.C.
Deposit date:2018-09-11
Release date:2018-10-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Crystal structures of the GH6 Orpinomyces sp. Y102 CelC7 enzyme with exo and endo activity and its complex with cellobiose.
Acta Crystallogr D Struct Biol, 75, 2019
3HR9
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BU of 3hr9 by Molmil
The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase F40I mutant
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, Beta-glucanase, ...
Authors:Tsai, L.C, Huang, H.C, Hsiao, C.H.
Deposit date:2009-06-09
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase mutant F40I
To be Published
6INR
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BU of 6inr by Molmil
The crystal structure of phytoplasmal effector causing phyllody symptoms 1 (PHYL1)
Descriptor: CADMIUM ION, Putative effector, AYWB SAP54-like protein
Authors:Liao, Y.T, Lin, S.S, Ko, T.P, Wang, H.C.
Deposit date:2018-10-26
Release date:2019-07-31
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural insights into the interaction between phytoplasmal effector causing phyllody 1 and MADS transcription factors.
Plant J., 100, 2019
8TQC
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BU of 8tqc by Molmil
Structure of the human CDK8 kinase module
Descriptor: Cyclin-C, Cyclin-dependent kinase 8, Mediator of RNA polymerase II transcription subunit 12, ...
Authors:Chen, S.F, Chao, T.C, Kim, H.J, Tang, H.C, Khadka, S, Li, T, Murakami, K, Boyer, T.G, Tsai, K.L.
Deposit date:2023-08-06
Release date:2024-10-09
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of the human transcriptional Mediator regulated by its dissociable kinase module.
Mol.Cell, 84, 2024
8TQ2
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BU of 8tq2 by Molmil
Structure of the kinase lobe of human CDK8 kinase module
Descriptor: Cyclin-C, Cyclin-dependent kinase 8, Mediator of RNA polymerase II transcription subunit 12, ...
Authors:Chen, S.F, Chao, T.C, Kim, H.J, Tang, H.C, Khadka, S, Li, T, Murakami, K, Boyer, T.G, Tsai, K.L.
Deposit date:2023-08-06
Release date:2024-10-09
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of the human transcriptional Mediator regulated by its dissociable kinase module.
Mol.Cell, 84, 2024
8TRH
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BU of 8trh by Molmil
The IDRc bound human core Mediator complex
Descriptor: Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 10, Mediator of RNA polymerase II transcription subunit 11, ...
Authors:Chen, S.F, Chao, T.C, Kim, H.J, Tang, H.C, Khadka, S, Li, T, Murakami, K, Boyer, T.G, Tsai, K.L.
Deposit date:2023-08-09
Release date:2024-10-09
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of the human transcriptional Mediator regulated by its dissociable kinase module.
Mol.Cell, 84, 2024
8TQW
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BU of 8tqw by Molmil
Structure of human transcriptional Mediator complex
Descriptor: Cyclin-C, Cyclin-dependent kinase 8, Mediator of RNA polymerase II transcription subunit 1, ...
Authors:Chen, S.F, Chao, T.C, Kim, H.J, Tang, H.C, Khadka, S, Li, T, Murakami, K, Boyer, T.G, Tsai, K.L.
Deposit date:2023-08-08
Release date:2024-10-09
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Structural basis of the human transcriptional Mediator regulated by its dissociable kinase module.
Mol.Cell, 84, 2024
3WUR
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BU of 3wur by Molmil
Structure of DMP19 Complex with 18-crown-6
Descriptor: 1,2-ETHANEDIOL, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, L(+)-TARTARIC ACID, ...
Authors:Lee, C.C, Wang, H.C, Wang, A.H.J.
Deposit date:2014-05-02
Release date:2014-10-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crowning proteins: modulating the protein surface properties using crown ethers.
Angew.Chem.Int.Ed.Engl., 53, 2014
3WX4
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BU of 3wx4 by Molmil
CRYSTAL STRUCTURE of T4 PHAGE ARN PROTEIN
Descriptor: Anti-restriction endonuclease
Authors:Ho, C.H, Wang, H.C, Ko, T.P, Wang, A.H.J.
Deposit date:2014-07-16
Release date:2014-08-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The T4 phage DNA mimic protein Arn inhibits the DNA binding activity of the bacterial histone-like protein H-NS
J.Biol.Chem., 289, 2014
7EWH
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BU of 7ewh by Molmil
Crystal structure of human PHGDH in complex with Homoharringtonine
Descriptor: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, D-3-phosphoglycerate dehydrogenase
Authors:Hsieh, C.H, Cheng, Y.S, Lee, Y.S, Huang, H.C, Juan, H.F.
Deposit date:2021-05-25
Release date:2022-12-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Homoharringtonine as a PHGDH inhibitor: Unraveling metabolic dependencies and developing a potent therapeutic strategy for high-risk neuroblastoma.
Biomed Pharmacother, 166, 2023
6B8C
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BU of 6b8c by Molmil
Crystal structure of NlpC/p60 domain of peptidoglycan hydrolase SagA
Descriptor: NLP/P60
Authors:Kim, B, Oren, D.A, Hang, H.C.
Deposit date:2017-10-06
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Enterococcus faeciumsecreted antigen A generates muropeptides to enhance host immunity and limit bacterial pathogenesis.
Elife, 8, 2019

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PDB entries from 2024-11-06

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