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PDB: 119 results

2B7V
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Structure of ADAR2 dsRBM2
Descriptor: Double-stranded RNA-specific editase 1
Authors:Stefl, R, Xu, M, Skrisovska, L, Emeson, R.B, Allain, F.H.-T.
Deposit date:2005-10-05
Release date:2006-03-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and specific RNA binding of ADAR2 double-stranded RNA binding motifs.
Structure, 14, 2006
2AD9
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Solution structure of Polypyrimidine Tract Binding protein RBD1 complexed with CUCUCU RNA
Descriptor: 5'-R(*CP*UP*CP*UP*CP*U)-3', Polypyrimidine tract-binding protein 1
Authors:Oberstrass, F.C, Auweter, S.D, Erat, M, Hargous, Y, Henning, A, Wenter, P, Reymond, L, Pitsch, S, Black, D.L, Allain, F.H.T.
Deposit date:2005-07-20
Release date:2005-10-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of PTB bound to RNA: specific binding and implications for splicing regulation
Science, 309, 2005
2B7T
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BU of 2b7t by Molmil
Structure of ADAR2 dsRBM1
Descriptor: Double-stranded RNA-specific editase 1
Authors:Stefl, R, Xu, M, Skrisovska, L, Emeson, R.B, Allain, F.H.-T.
Deposit date:2005-10-05
Release date:2006-03-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and specific RNA binding of ADAR2 double-stranded RNA binding motifs.
Structure, 14, 2006
2ADC
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BU of 2adc by Molmil
Solution structure of Polypyrimidine Tract Binding protein RBD34 complexed with CUCUCU RNA
Descriptor: 5'-R(*CP*UP*CP*UP*CP*U)-3', Polypyrimidine tract-binding protein 1
Authors:Oberstrass, F.C, Auweter, S.D, Erat, M, Hargous, Y, Henning, A, Wenter, P, Reymond, L, Pitsch, S, Black, D.L, Allain, F.H.T.
Deposit date:2005-07-20
Release date:2005-10-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of PTB bound to RNA: specific binding and implications for splicing regulation
Science, 309, 2005
2ADB
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BU of 2adb by Molmil
Solution structure of Polypyrimidine Tract Binding protein RBD2 complexed with CUCUCU RNA
Descriptor: 5'-R(*CP*UP*CP*UP*CP*U)-3', Polypyrimidine tract-binding protein 1
Authors:Oberstrass, F.C, Auweter, S.D, Erat, M, Hargous, Y, Henning, A, Wenter, P, Reymond, L, Pitsch, S, Black, D.L, Allain, F.H.T.
Deposit date:2005-07-20
Release date:2005-10-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of PTB bound to RNA: specific binding and implications for splicing regulation
Science, 309, 2005
6G04
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BU of 6g04 by Molmil
NMR Solution Structure of Yeast TSR2(1-152) in Complex with S26A(100-119)
Descriptor: 40S ribosomal protein S26-A, Pre-rRNA-processing protein TSR2
Authors:Michel, E, Schuetz, S, Damberger, F.F, Allain, F.H.-T, Panse, V.G.
Deposit date:2018-03-16
Release date:2018-09-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Molecular basis for disassembly of an importin:ribosomal protein complex by the escortin Tsr2.
Nat Commun, 9, 2018
6GBM
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BU of 6gbm by Molmil
Solution structure of FUS-RRM bound to stem-loop RNA
Descriptor: RNA (5'-R(*GP*GP*CP*AP*GP*AP*UP*UP*AP*CP*AP*AP*UP*UP*CP*UP*AP*UP*UP*UP*GP*CP*C)-3'), RNA-binding protein FUS
Authors:Loughlin, F.E, Allain, F.H.-T.
Deposit date:2018-04-15
Release date:2019-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Solution Structure of FUS Bound to RNA Reveals a Bipartite Mode of RNA Recognition with Both Sequence and Shape Specificity.
Mol. Cell, 73, 2019
6G99
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Solution structure of FUS-ZnF bound to UGGUG
Descriptor: RNA (5'-R(*UP*GP*GP*UP*G)-3'), RNA-binding protein FUS, ZINC ION
Authors:Loughlin, F.E, Allain, F.H.-T.
Deposit date:2018-04-10
Release date:2019-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Solution Structure of FUS Bound to RNA Reveals a Bipartite Mode of RNA Recognition with Both Sequence and Shape Specificity.
Mol. Cell, 73, 2019
6G03
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BU of 6g03 by Molmil
NMR Solution Structure of yeast TSR2(1-152)
Descriptor: Pre-rRNA-processing protein TSR2
Authors:Michel, E, Schuetz, S, Damberger, F.F, Allain, F.H.-T, Panse, V.G.
Deposit date:2018-03-16
Release date:2018-09-19
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Molecular basis for disassembly of an importin:ribosomal protein complex by the escortin Tsr2.
Nat Commun, 9, 2018
6GVU
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BU of 6gvu by Molmil
NMR structure of the DNA-bound helix bundle domain from the functional pRN1 primase
Descriptor: DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), functional pRN1 primase
Authors:Boudet, J, Lipps, G, Allain, F.H.-T.
Deposit date:2018-06-21
Release date:2018-12-26
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:A Small Helical Bundle Prepares Primer Synthesis by Binding Two Nucleotides that Enhance Sequence-Specific Recognition of the DNA Template.
Cell, 176, 2019
6GVT
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BU of 6gvt by Molmil
Hybrid structure of the pRN1 helix bundle domain in complex with DNA and 2 ATP molecules
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), MAGNESIUM ION, ...
Authors:Boudet, J, Wiegand, T, Meier, B.H, Lipps, G, Allain, F.H.-T.
Deposit date:2018-06-21
Release date:2018-12-26
Last modified:2024-11-06
Method:SOLID-STATE NMR, SOLUTION NMR
Cite:A Small Helical Bundle Prepares Primer Synthesis by Binding Two Nucleotides that Enhance Sequence-Specific Recognition of the DNA Template.
Cell, 176, 2019
6GVQ
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BU of 6gvq by Molmil
DNA-bound pRN1 helix bundle domain with ATP and magnesium in the interaction buffer
Descriptor: DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), functional pRN1 primase
Authors:Boudet, J, Lipps, G, Allain, F.H.-T.
Deposit date:2018-06-21
Release date:2018-12-26
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:A Small Helical Bundle Prepares Primer Synthesis by Binding Two Nucleotides that Enhance Sequence-Specific Recognition of the DNA Template.
Cell, 176, 2019
5OR0
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BU of 5or0 by Molmil
NMR derived model of the 5'-splice site of SMN2 in complex with the 5'-end of U1 snRNA
Descriptor: RNA (5'-R(P*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), RNA (5'-R(P*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3')
Authors:Campagne, S, Clery, A, Allain, F.H.
Deposit date:2017-08-14
Release date:2017-08-30
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Binding to SMN2 pre-mRNA-protein complex elicits specificity for small molecule splicing modifiers.
Nat Commun, 8, 2017
5MDI
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BU of 5mdi by Molmil
Crystal structure of TDP-43 N-terminal domain at 2.1 A resolution
Descriptor: ACETATE ION, TAR DNA-binding protein 43
Authors:Afroz, T, Hock, E.-M, Ernst, P, Foglieni, C, Jambeau, M, Gilhespy, L, Laferriere, F, Maniecka, Z, Plueckthun, A, Mittl, P, Paganetti, P, Allain, F.H.T, Polymenidou, M.
Deposit date:2016-11-11
Release date:2017-07-05
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Functional and dynamic polymerization of the ALS-linked protein TDP-43 antagonizes its pathologic aggregation.
Nat Commun, 8, 2017
2HGL
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BU of 2hgl by Molmil
NMR structure of the first qRRM domain of human hnRNP F
Descriptor: Heterogeneous nuclear ribonucleoprotein F
Authors:Dominguez, C, Allain, F.H.-T.
Deposit date:2006-06-27
Release date:2006-07-11
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition.
Nucleic Acids Res., 34, 2006
2HGN
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BU of 2hgn by Molmil
NMR structure of the third qRRM domain of human hnRNP F
Descriptor: Heterogeneous nuclear ribonucleoprotein F
Authors:Dominguez, C, Allain, F.H.-T.
Deposit date:2006-06-27
Release date:2006-07-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition.
Nucleic Acids Res., 34, 2006
2I38
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BU of 2i38 by Molmil
Solution structure of the RRM of SRp20
Descriptor: Fusion protein consists of immunoglobulin G-Binding Protein G and Splicing factor, arginine/serine-rich 3
Authors:Hargous, Y.F, Allain, F.H.T.
Deposit date:2006-08-17
Release date:2006-12-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Molecular basis of RNA recognition and TAP binding by the SR proteins SRp20 and 9G8.
Embo J., 25, 2006
2K33
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BU of 2k33 by Molmil
Solution structure of an N-glycosylated protein using in vitro glycosylation
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-[beta-D-glucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucopyranose, AcrA
Authors:Slynko, V, Schubert, M, Numao, S, Kowarik, M, Aebi, M, Allain, F.H.-T.
Deposit date:2008-04-18
Release date:2009-02-03
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:NMR structure determination of a segmentally labeled glycoprotein using in vitro glycosylation.
J.Am.Chem.Soc., 131, 2009
2FY1
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BU of 2fy1 by Molmil
A dual mode of RNA recognition by the RBMY protein
Descriptor: RNA-binding motif protein, Y chromosome, family 1 member A1, ...
Authors:Skrisovska, L, Bourgois, C, Stefl, R, Kister, L, Wenter, P, Elliot, D, Stevenin, J, Allain, F.H.T.
Deposit date:2006-02-07
Release date:2007-02-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The testis-specific human protein RBMY recognizes RNA through a novel mode of interaction.
EMBO Rep., 8, 2007
2JVO
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BU of 2jvo by Molmil
Segmental isotope labeling of Npl3
Descriptor: Nucleolar protein 3
Authors:Skrisovska, L, Allain, F.H.-T.
Deposit date:2007-09-24
Release date:2007-12-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Improved segmental isotope labeling methods for the NMR study of multidomain or large proteins: application to the RRMs of Npl3p and hnRNP L
J.Mol.Biol., 375, 2008
2JVR
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BU of 2jvr by Molmil
Segmental Isotope Labeling of Npl3p
Descriptor: Nucleolar protein 3
Authors:Skrisovska, L, Allain, F.H.-T.
Deposit date:2007-09-25
Release date:2007-12-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Improved segmental isotope labeling methods for the NMR study of multidomain or large proteins: application to the RRMs of Npl3p and hnRNP L
J.Mol.Biol., 375, 2008
2HGM
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BU of 2hgm by Molmil
NMR structure of the second qRRM domain of human hnRNP F
Descriptor: Heterogeneous nuclear ribonucleoprotein F
Authors:Dominguez, C, Allain, F.H.-T.
Deposit date:2006-06-27
Release date:2006-07-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition.
Nucleic Acids Res., 34, 2006
6GC5
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BU of 6gc5 by Molmil
Molecular basis for AU-rich element recognition and dimerization by the HuR C-terminal RRM
Descriptor: AU-rich RNA, ELAV-like protein 1
Authors:Ripin, N, Allain, F.H.
Deposit date:2018-04-17
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis for AU-rich element recognition and dimerization by the HuR C-terminal RRM.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HMO
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BU of 6hmo by Molmil
Solution structure of the RNA duplex formed by the 5'-end of U1snRNA and the 5'-splice site of SMN2 exon7 in complex with the SMN-C5 splicing modifier
Descriptor: 2-(8-fluoranyl-2-methyl-imidazo[1,2-a]pyridin-6-yl)-7-(4-methylpiperazin-1-yl)pyrido[1,2-a]pyrimidin-4-one, RNA (5'-R(*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), RNA (5'-R(*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3')
Authors:Campagne, S, Allain, F.H.
Deposit date:2018-09-12
Release date:2019-08-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of a small molecule targeting RNA for a specific splicing correction.
Nat.Chem.Biol., 15, 2019
2GIO
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BU of 2gio by Molmil
Solution Structure of a portion of the 5'UTR of HspA mRNA of Bradyrhizobium japonicum
Descriptor: 29-MER
Authors:Chowdhury, S, Maris, C, Allain, F.H, Narberhaus, F.
Deposit date:2006-03-29
Release date:2006-06-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Molecular basis for temperature sensing by an RNA thermometer.
Embo J., 25, 2006

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