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PDB: 229 件

2YGQ
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WIF domain-epidermal growth factor (EGF)-like domains 1-3 of human Wnt inhibitory factor 1 in complex with 1,2- dipalmitoylphosphatidylcholine
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Malinauskas, T, Aricescu, A.R, Lu, W, Siebold, C, Jones, E.Y.
登録日2011-04-19
公開日2011-07-13
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.951 Å)
主引用文献Modular Mechanism of Wnt Signaling Inhibition by Wnt Inhibitory Factor 1
Nat.Struct.Mol.Biol., 18, 2011
2LSF
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Structure and Stability of Duplex DNA Containing (5'S) 5',8-Cyclo-2'-Deoxyadenosine: An Oxidative Lesion Repair by NER
分子名称: DNA (5'-D(*CP*GP*TP*AP*CP*(02I)P*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*TP*GP*TP*AP*CP*G)-3')
著者Zaliznyak, T, de los Santos, C, Lukin, M.
登録日2012-04-30
公開日2012-09-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and Stability of Duplex DNA Containing (5'S)-5',8-Cyclo-2'-deoxyadenosine: An Oxidatively Generated Lesion Repaired by NER.
Chem.Res.Toxicol., 25, 2012
2LWN
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Solution Structure of Duplex DNA Containing a b-Carba-Fapy-dG Lesion
分子名称: DNA (5'-D(*CP*GP*TP*AP*C*(LWM)P*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*GP*TP*AP*CP*G)-3')
著者Zalianyak, T, de los Santos, C, Lukin, M, Attaluri, S, Johnson, F.
登録日2012-08-03
公開日2013-02-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of Duplex DNA Containing a b-Carba-Fapy-dG Lesion
Chem.Res.Toxicol., 25, 2012
2LWM
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Solution Structure of Duplex DNA Containing a b-Carba-Fapy-dG Lesion
分子名称: DNA (5'-D(*CP*GP*TP*AP*C*(LWM)P*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*GP*TP*AP*CP*G)-3')
著者Zalianyak, T, de los Santos, C, Lukin, M, Attaluri, S, Johnson, F.
登録日2012-08-03
公開日2013-02-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of Duplex DNA Containing a b-Carba-Fapy-dG Lesion
Chem.Res.Toxicol., 25, 2012
2LWO
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Solution Structure of Duplex DNA Containing a b-Carba-Fapy-dG Lesion
分子名称: DNA (5'-D(*G*CP*GP*TP*AP*C*(LWM)P*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*GP*TP*AP*CP*G)-3')
著者Zalianyak, T, de los Santos, C, Lukin, M, Attaluri, S, Johnson, F.
登録日2012-08-03
公開日2013-02-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of Duplex DNA Containing a b-Carba-Fapy-dG Lesion
Chem.Res.Toxicol., 25, 2012
2K1Y
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Solution Structure of Duplex DNA Containing the Mutagenic Lesion: 1,N2-Etheno-2'-deoxyguanine
分子名称: 5'-D(*DCP*DGP*DTP*DAP*DCP*(GNE)P*DCP*DAP*DTP*DGP*DC)-3', 5'-D(*DGP*DCP*DAP*DTP*DGP*DCP*DGP*DTP*DAP*DCP*DG)-3'
著者Zaliznyak, T, Lukin, M, Johnson, F, de los Santos, C.
登録日2008-03-18
公開日2009-02-03
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of duplex DNA containing the mutagenic lesion 1,N(2)-etheno-2'-deoxyguanine.
Biochemistry, 47, 2008
2LSZ
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NMR structure of duplex DNA containing the alpha-OH-PdG dA base pair: A mutagenic intermediate of acrolein
分子名称: DNA (5'-D(*CP*GP*TP*AP*CP*(63H)P*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*AP*GP*TP*AP*CP*G)-3')
著者Zaliznyak, T, de los Santos, C, Lukin, M, El-khateeb, M, Bonala, R, Johnson, F.
登録日2012-05-09
公開日2012-06-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR structure of duplex DNA containing the alpha-OH-PdG.dA base pair: a mutagenic intermediate of acrolein.
Biopolymers, 93, 2010
2LT0
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NMR structure of duplex DNA containing the beta-OH-PdG dA base pair: A mutagenic intermediate of acrolein
分子名称: DNA (5'-D(*CP*GP*TP*AP*CP*(63G)P*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*AP*GP*TP*AP*CP*G)-3')
著者Zaliznyak, T, de los Santos, C, Lukin, M, El-khateeb, M, Bonala, R, Johnson, F.
登録日2012-05-09
公開日2012-06-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR structure of duplex DNA containing the alpha-OH-PdG.dA base pair: a mutagenic intermediate of acrolein.
Biopolymers, 93, 2010
4M6A
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N-Terminal beta-Strand Swapping in a Consensus Derived Alternative Scaffold Driven by Stabilizing Hydrophobic Interactions
分子名称: Tencon
著者Luo, J, Teplyakov, A, Obmolova, G, Malia, T.J, Chan, W, Jocobs, S.A, O'neil, K.T, Gilliland, G.L.
登録日2013-08-09
公開日2014-02-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献N-terminal beta-strand swapping in a consensus-derived alternative scaffold driven by stabilizing hydrophobic interactions.
Proteins, 82, 2014
6Z97
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Structure of the prefusion SARS-CoV-2 spike glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin
著者Duyvesteyn, H.M.E, Ren, J, Zhao, Y, Zhou, D, Huo, J, Carrique, L, Malinauskas, T, Ruza, R.R, Shah, P.N.M, Fry, E.E, Owens, R, Stuart, D.I.
登録日2020-06-03
公開日2020-07-01
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Neutralization of SARS-CoV-2 by Destruction of the Prefusion Spike.
Cell Host Microbe, 28, 2020
4DN3
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Crystal structure of anti-mcp-1 antibody cnto888
分子名称: CNTO888 HEAVY CHAIN, CNTO888 LIGHT CHAIN
著者Obmolova, G, Teplyakov, A, Malia, T, Grygiel, T, Sweet, R, Snyder, L, Gilliland, G.
登録日2012-02-08
公開日2012-10-03
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for high selectivity of anti-CCL2 neutralizing antibody CNTO 888.
Mol.Immunol., 51, 2012
6Z43
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Cryo-EM Structure of SARS-CoV-2 Spike : H11-D4 Nanobody Complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody, ...
著者Ruza, R.R, Duyvesteyn, H.M.E, Shah, P, Carrique, L, Ren, J, Malinauskas, T, Zhou, D, Stuart, D.I, Naismith, J.H.
登録日2020-05-22
公開日2020-06-03
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for a potent neutralising single-domain antibody that blocks SARS-CoV-2 binding to its receptor ACE2
To Be Published
4M7L
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BU of 4m7l by Molmil
Crystal structure of the complex between human tissue factor extracellular domain and antibody 10H10 FAB fragment
分子名称: 10H10 heavy chain, 10H10 light chain, Tissue factor
著者Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L.
登録日2013-08-12
公開日2014-08-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structure of the complex between human tissue factor extracellular domain and antibody 10H10 FAB fragment
To be Published
4M6O
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BU of 4m6o by Molmil
Crystal structure of anti-NGF antibody CNTO7309
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CNTO7309 heavy chain, CNTO7309 light chain, ...
著者Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L.
登録日2013-08-09
公開日2014-03-26
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Antibody modeling assessment II. Structures and models.
Proteins, 82, 2014
8BHB
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GABA-A receptor a5 homomer - a5V3 - RO154513
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, ethyl 8-[(azanylidene-$l^{4}-azanylidene)amino]-5-methyl-6-oxidanylidene-4~{H}-imidazo[1,5-a][1,4]benzodiazepine-3-carboxylate
著者Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y, Wahid, A.A.
登録日2022-10-30
公開日2023-11-01
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.54 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHG
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GABA-A receptor a5 heteromer - a5V2 - Bretazenil
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bretazenil, DECYL-BETA-D-MALTOPYRANOSIDE, ...
著者Miller, P.S, Malinauskas, T.M, Omari, K.E, Aricescu, A.R.
登録日2022-10-31
公開日2023-11-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BGI
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GABA-A receptor a5 homomer - a5V1 - Flumazenil
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, Pregnanolone, ...
著者Miller, P.S, Malinauskas, T.M, Omari, K.E, Aricescu, A.R.
登録日2022-10-27
公開日2023-11-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BLJ
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Crystal structure of the ligand-binding domain (LBD) of human iGluR Delta-1 (GluD1), apo state
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Heroven, C, Malinauskas, T, Aricescu, A.R.
登録日2022-11-09
公開日2023-11-22
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献GluD1 binds GABA and controls inhibitory plasticity.
Science, 382, 2023
8BEJ
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GABA-A receptor a5 homomer - a5V3 - APO
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5
著者Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y.
登録日2022-10-21
公開日2023-11-01
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHM
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GABA-A receptor a5 homomer - a5V3 - DMCM
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, methyl 4-ethyl-6,7-dimethoxy-9H-pyrido[3,4-b]indole-3-carboxylate
著者Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y.
登録日2022-10-31
公開日2023-11-01
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHI
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GABA-A receptor a5 homomer - a5V3 - RO5211223
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, [1,1-bis(oxidanylidene)-1,4-thiazinan-4-yl]-[6-[[5-methyl-3-(6-methylpyridin-3-yl)-1,2-oxazol-4-yl]methoxy]pyridin-3-yl]methanone
著者Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y.
登録日2022-10-31
公開日2023-11-01
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHK
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GABA-A receptor a5 homomer - a5V3 - Diazepam
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7-CHLORO-1-METHYL-5-PHENYL-1,3-DIHYDRO-2H-1,4-BENZODIAZEPIN-2-ONE, Gamma-aminobutyric acid receptor subunit alpha-5
著者Miller, P.S, Malinauskas, T.M, Kasaragod, V.B, Chirgadze, D.Y.
登録日2022-10-31
公開日2023-11-01
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHO
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GABA-A receptor a5 homomer - a5V3 - L655708
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, ethyl (7~{S})-15-methoxy-12-oxidanylidene-2,4,11-triazatetracyclo[11.4.0.0^{2,6}.0^{7,11}]heptadeca-1(17),3,5,13,15-pentaene-5-carboxylate
著者Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y.
登録日2022-10-31
公開日2023-11-01
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHQ
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GABA-A receptor a5 homomer - a5V3 - RO7172670
分子名称: 2-[[5-methyl-3-(6-methylpyridazin-3-yl)-1,2-oxazol-4-yl]methyl]-5-(5-oxa-2-azaspiro[3.5]nonan-2-yl)pyridazin-3-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5
著者Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Kasaragod, V.B.
登録日2022-10-31
公開日2023-11-01
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHS
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GABA-A receptor a5 homomer - a5V3 - RO4938581
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[bis(fluoranyl)methyl]-15-bromanyl-2,4,8,9,11-pentazatetracyclo[11.4.0.0^{2,6}.0^{8,12}]heptadeca-1(13),3,5,9,11,14,16-heptaene, Gamma-aminobutyric acid receptor subunit alpha-5
著者Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y.
登録日2022-10-31
公開日2023-11-01
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023

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