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PDB: 105 件

6U0R
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Cryo-EM structure of the chimeric vector AAV2.7m8
分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid protein VP1
著者Agbandje-McKenna, M, Bennett, A.
登録日2019-08-14
公開日2020-08-19
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Cryo-EM structure of the chimeric vector AAV2.7m8
To Be Published
6U0V
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Atomic-Resolution Cryo-EM Structure of AAV2 VLP
分子名称: Capsid protein VP1
著者Agbandje-Mckenna, M, Bennett, A.
登録日2019-08-14
公開日2020-08-19
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Cryo-EM structure of the chimeric vector AAV2.7m8
To Be Published
1P5Y
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The structures of host range controlling regions of the capsids of canine and feline parvoviruses and mutants
分子名称: Coat protein VP2
著者Agbandje-McKenna, M, Govindasamy, L.
登録日2003-04-28
公開日2003-08-26
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of host range-controlling regions of the capsids of canine and feline parvoviruses and mutants.
J.Virol., 77, 2003
1P5W
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The structures of host range controlling regions of the capsids of canine and feline parvoviruses and mutants
分子名称: 5'-D(P*(3DR)P*TP*AP*CP*CP*TP*CP*TP*TP*GP*C)-3', Coat protein VP2, MAGNESIUM ION
著者Agbandje-McKenna, M, Govindasamy, L.
登録日2003-04-28
公開日2003-08-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of host range-controlling regions of the capsids of canine and feline parvoviruses and mutants.
J.Virol., 77, 2003
6E9D
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Sub-2 Angstrom Ewald Curvature-Corrected Single-Particle Cryo-EM Reconstruction of AAV-2 L336C
分子名称: Capsid protein VP1
著者Tan, Y.Z, Aiyer, S, Mietzsch, M, Hull, J.A, McKenna, R, Baker, T.S, Agbandje-McKenna, M, Lyumkis, D.
登録日2018-07-31
公開日2018-08-15
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (1.86 Å)
主引用文献Sub-2 angstrom Ewald curvature corrected structure of an AAV2 capsid variant.
Nat Commun, 9, 2018
7MT0
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Structure of the adeno-associated virus 9 capsid at pH 7.4
分子名称: Capsid protein VP1
著者Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
登録日2021-05-12
公開日2021-06-02
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MTZ
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Structure of the adeno-associated virus 9 capsid at pH pH 7.4 in complex with terminal galactose
分子名称: Capsid protein VP1, beta-D-galactopyranose
著者Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
登録日2021-05-14
公開日2021-06-09
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.43 Å)
主引用文献Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
2B60
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Structure of HIV-1 protease mutant bound to Ritonavir
分子名称: GLYCEROL, Gag-Pol polyprotein, RITONAVIR
著者Clemente, J.C, Stow, L.R, Janka, L.K, Jeung, J.A, Desai, K.A, Govindasamy, L, Agbandje-McKenna, M, McKenna, R, Goodenow, M.M, Dunn, B.M.
登録日2005-09-29
公開日2006-11-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献In vivo, kinetic, and structural analysis of the development of ritonavir resistance
To be Published
2ANL
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X-ray crystal structure of the aspartic protease plasmepsin 4 from the malarial parasite plasmodium malariae bound to an allophenylnorstatine based inhibitor
分子名称: (4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylbutanoyl}-5,5-dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine-4-carboxamide, plasmepsin IV
著者Clemente, J.C, Govindasamy, L, Madabushi, A, Fisher, S.Z, Moose, R.E, Yowell, C.A, Hidaka, K, Kimura, T, Hayashi, Y, Kiso, Y, Agbandje-McKenna, M, Dame, J.B, Dunn, B.M, McKenna, R.
登録日2005-08-11
公開日2006-04-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the aspartic protease plasmepsin 4 from the malarial parasite Plasmodium malariae bound to an allophenylnorstatine-based inhibitor.
Acta Crystallogr.,Sect.D, 62, 2006
6NXE
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Cryo-EM Reconstruction of Protease-Activateable Adeno-Associated Virus 9 (AAV9-L001)
分子名称: Capsid protein VP1
著者Bennett, A.B, Agbandje-Mckenna, M.
登録日2019-02-08
公開日2019-03-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Protease-Activatable Adeno-Associated Virus Vector for Gene Delivery to Damaged Heart Tissue.
Mol. Ther., 27, 2019
4RSO
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BU of 4rso by Molmil
The structure of the neurotropic AAVrh.8 viral vector
分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, CHLORIDE ION, Capsid protein VP1, ...
著者Halder, S, Van Vliet, K, Smith, J.K, McKenna, R, Wilson, J.M, Agbandje-McKenna, M.
登録日2014-11-10
公開日2016-04-13
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of neurotropic adeno-associated virus AAVrh.8.
J.Struct.Biol., 192, 2015
5JJ8
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Crystal Structure of the Beta Carbonic Anhydrase psCA3 isolated from Pseudomonas aeruginosa - alternate crystal packing form
分子名称: Carbonic anhydrase, ZINC ION
著者Pinard, M.A, Kurian, J.J, Aggarwal, M, Agbandje-McKenna, M, McKenna, R.
登録日2016-04-22
公開日2016-07-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.585 Å)
主引用文献Cryoannealing-induced space-group transition of crystals of the carbonic anhydrase psCA3.
Acta Crystallogr.,Sect.F, 72, 2016
6O9R
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The capsid structure of empty AAVrh.10 particles
分子名称: Capsid protein VP1
著者Mietzsch, M, Agbandje-McKenna, M.
登録日2019-03-14
公開日2019-12-11
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Comparative Analysis of the Capsid Structures of AAVrh.10, AAVrh.39, and AAV8.
J.Virol., 94, 2020
4IOV
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BU of 4iov by Molmil
The structure of AAVrh32.33, a Novel Gene Delivery Vector
分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid protein VP1
著者Mikalism, K, Nam, H.-J, Van vilet, K, Vandenberghe, L.H, Mays, L.E, McKenna, R, Wilson, J, Agbandje-McKenna, M.
登録日2013-01-08
公開日2014-04-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The structure of AAVrh32.33, a novel gene delivery vector.
J.Struct.Biol., 186, 2014
4QC8
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Structural annotation of pathogenic bovine Parvovirus-1
分子名称: VP2
著者Kailasan, S, Halder, S, Gurda, B.L, Bladek, H, Chipman, P.R, McKenna, R, Brown, K, Agbandje-McKenna, M.
登録日2014-05-09
公開日2015-01-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of an enteric pathogen, bovine parvovirus.
J.Virol., 89, 2015
6X2K
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BU of 6x2k by Molmil
The Tusavirus (TuV) capsid structure
分子名称: VP2
著者Mietzsch, M, Agbandje-McKenna, M.
登録日2020-05-20
公開日2020-07-01
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Structural Characterization of Cuta- and Tusavirus: Insight into Protoparvoviruses Capsid Morphology.
Viruses, 12, 2020
6WH3
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Capsid structure of Penaeus monodon metallodensovirus at pH 8.2
分子名称: CALCIUM ION, Penaeus monodon metallodensovirus major capsid protein
著者Penzes, J.J, Pham, H.T, Chipman, P, Bhattacharya, N, McKenna, R, Agbandje-McKenna, M, Tijssen, P.
登録日2020-04-07
公開日2020-04-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Molecular biology and structure of a novel penaeid shrimp densovirus elucidate convergent parvoviral host capsid evolution.
Proc.Natl.Acad.Sci.USA, 117, 2020
5EGC
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Structure of the Adeno-Associated Virus Serotype 1 sialic acid complex
分子名称: Capsid protein, MAGNESIUM ION, N-acetyl-alpha-neuraminic acid
著者Huang, L.Y, Agbandje-McKenna, M.
登録日2015-10-27
公開日2016-03-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.011 Å)
主引用文献Characterization of the Adeno-Associated Virus 1 and 6 Sialic Acid Binding Site.
J.Virol., 90, 2016
3MYU
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BU of 3myu by Molmil
Mycoplasma genitalium MG289
分子名称: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, ACETATE ION, High affinity transport system protein p37
著者Sippel, K.H, Boehlein, S.K, Govindasamy, L, Namiki, K, Satai, Y, Quirit, J.G, Agbandje-McKenna, M, Goodison, S, Rosser, C.J, Sankaran, B, McKenna, R.
登録日2010-05-11
公開日2010-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Insights into Mycoplasma genitalium metabolism revealed by the structure of MG289, an extracytoplasmic thiamine binding lipoprotein.
Proteins, 79, 2011
5IPI
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BU of 5ipi by Molmil
Structure of Adeno-associated virus type 2 VLP
分子名称: Capsid protein VP1
著者Drouin, L.M, Lins, B, Janssen, M.E, Bennet, A, Chipman, P, McKenna, R, Chen, W, Muzyczka, N, Cardone, G, Baker, T.S, Agbandje-McKenna, M.
登録日2016-03-09
公開日2016-07-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-electron Microscopy Reconstruction and Stability Studies of the Wild Type and the R432A Variant of Adeno-associated Virus Type 2 Reveal that Capsid Structural Stability Is a Major Factor in Genome Packaging.
J.Virol., 90, 2016
5IPK
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BU of 5ipk by Molmil
Structure of the R432A variant of Adeno-associated virus type 2 VLP
分子名称: Capsid protein VP1
著者Drouin, L.M, Lins, B, Janssen, M.E, Bennet, A, Chipman, P, McKenna, R, Chen, W, Muzyczka, N, Cardone, G, Baker, T.S, Agbandje-McKenna, M.
登録日2016-03-09
公開日2016-07-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-electron Microscopy Reconstruction and Stability Studies of the Wild Type and the R432A Variant of Adeno-associated Virus Type 2 Reveal that Capsid Structural Stability Is a Major Factor in Genome Packaging.
J.Virol., 90, 2016
4FIK
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BU of 4fik by Molmil
Human carbonic anhydrase II H64A complexed with thioxolone hydrolysis products
分子名称: 2,4-dihydroxybenzenesulfenic acid, 4,4'-disulfanediyldibenzene-1,3-diol, 4-MERCAPTOBENZENE-1,3-DIOL, ...
著者Sippel, K.H, Genis, C, Govindasamy, L, Agbandje-McKenna, M, Tripp, B.C, McKenna, R.
登録日2012-06-08
公開日2012-06-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Synchrotron Radiation Provides a Plausible Explanation for the Generation of a Free Radical Adduct of Thioxolone in Mutant Carbonic Anhydrase II.
J Phys Chem Lett, 1, 2010
3HS4
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Human carbonic anhydrase II complexed with acetazolamide
分子名称: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, Carbonic anhydrase 2, GLYCEROL, ...
著者Robbins, A.H, Genis, C, Domsic, J, Sippel, K.H, Agbandje-McKenna, M, McKenna, R.
登録日2009-06-10
公開日2009-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High-resolution structure of human carbonic anhydrase II complexed with acetazolamide reveals insights into inhibitor drug design.
Acta Crystallogr.,Sect.F, 65, 2009
1Z1C
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Structural Determinants of Tissue Tropism and In Vivo Pathogenicity for the Parvovirus Minute virus of Mice
分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, 5'-D(*AP*CP*AP*CP*CP*AP*AP*AP*A)-3', 5'-D(*AP*TP*CP*CP*TP*CP*TP*AP*TP*CP*AP*C)-3', ...
著者Kontou, M, Govindasamy, L, Nam, H.J, Bryant, N, Llamas-Saiz, A.L, Foces-Foces, C, Hernando, E, Rubio, M.P, McKenna, R, Almendral, J.M, Agbandje-McKenna, M.
登録日2005-03-03
公開日2005-09-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural determinants of tissue tropism and in vivo pathogenicity for the parvovirus minute virus of mice.
J.Virol., 79, 2005
5URF
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The structure of human bocavirus 1
分子名称: viral protein 3
著者Mietzsch, M, Kailasan, S, Garrison, J, Ilyas, M, Chipman, P, Kandola, K, Jansen, M, Spear, J, Sousa, D, McKenna, R, Soderlund-Venermo, M, Baker, T, Agbandje-McKenna, M.
登録日2017-02-10
公開日2017-03-29
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural Insights into Human Bocaparvoviruses.
J. Virol., 91, 2017

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