Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 91 件

3RJM
DownloadVisualize
BU of 3rjm by Molmil
CASPASE2 IN COMPLEX WITH CHDI LIGAND 33c
分子名称: Caspase-2, Peptide inhibitor (ACE)VDV(3PX)D-CHO
著者Abendroth, J, Lorimer, D, Stewart, L, Maillard, M, Kiselyov, A.S.
登録日2011-04-15
公開日2011-09-21
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Exploiting differences in caspase-2 and -3 S(2) subsites for selectivity: Structure-based design, solid-phase synthesis and in vitro activity of novel substrate-based caspase-2 inhibitors.
Bioorg.Med.Chem., 19, 2011
5W07
DownloadVisualize
BU of 5w07 by Molmil
CRYSTAL STRUCTURE OF THE INHA FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH AN12855, EBSI 4333.
分子名称: (~{N}~{E})-~{N}-[[2-[[2-ethylsulfonyl-1,1-bis(oxidanyl)-3,4-dihydro-2,3,1$l^{4}-benzodiazaborinin-7-yl]oxy]-5-(trifluoromethyl)phenyl]methylidene]hydroxylamine, Enoyl-[acyl-carrier-protein] reductase [NADH]
著者Abendroth, J, Edwards, T.E, Lorimer, D.
登録日2017-05-30
公開日2018-06-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Discovery of a cofactor-independent inhibitor of Mycobacterium tuberculosis InhA
To Be Published
7RBX
DownloadVisualize
BU of 7rbx by Molmil
Crystal structure of isocitrate lyase and phosphorylmutase:isocitrate lyase from Brucella melitensis biovar Abortus 2308 bound to itaconic acid
分子名称: 1,2-ETHANEDIOL, 2-methylidenebutanedioic acid, Isocitrase, ...
著者Seattle Structural Genomics Center for Infectious Disease, Edwards, T.E, Abendroth, J, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2021-07-06
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Aconitate decarboxylase 1 participates in the control of pulmonary Brucella infection in mice.
Plos Pathog., 17, 2021
8DOF
DownloadVisualize
BU of 8dof by Molmil
Pseudomonas aeruginosa MurC with WYH9-2-P - OSA_001044
分子名称: (2R)-2-cyclohexyl-2-[(4-{[5-(propan-2-yl)-1H-pyrazol-3-yl]amino}-1H-pyrazolo[3,4-d]pyrimidin-6-yl)amino]ethan-1-ol, 1,2-ETHANEDIOL, SULFATE ION, ...
著者Horanyi, P.S, Wang, Y, Todd, M.H, Abendroth, J, Edwards, T, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2022-07-13
公開日2022-08-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Pseudomonas aeruginosa MurC with WYH9-2-P - OSA_001044
To Be Published
1K1D
DownloadVisualize
BU of 1k1d by Molmil
Crystal structure of D-hydantoinase
分子名称: D-hydantoinase, ZINC ION
著者Cheon, Y.H, Kim, H.S, Han, K.H, Abendroth, J, Niefind, K, Schomburg, D, Wang, J, Kim, Y.
登録日2001-09-25
公開日2002-08-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Crystal structure of D-hydantoinase from Bacillus stearothermophilus: insight into the stereochemistry of enantioselectivity.
Biochemistry, 41, 2002
5W8I
DownloadVisualize
BU of 5w8i by Molmil
Crystal Structure of Lactate Dehydrogenase A in complex with inhibitor compound 23 and Zinc
分子名称: 2-[3-(3,4-difluorophenyl)-5-hydroxy-1H-pyrazol-1-yl]-1,3-thiazole-4-carboxylic acid, CITRIC ACID, DIMETHYL SULFOXIDE, ...
著者Lukacs, C.M, Abendroth, J.
登録日2017-06-21
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Discovery and Optimization of Potent, Cell-Active Pyrazole-Based Inhibitors of Lactate Dehydrogenase (LDH).
J. Med. Chem., 60, 2017
4TMD
DownloadVisualize
BU of 4tmd by Molmil
X-ray structure of Putative uncharacterized protein (Rv0999 ortholog) from Mycobacterium smegmatis
分子名称: IODIDE ION, Uncharacterized protein
著者Horanyi, P.S, Dranow, D.M, Abendroth, J, Lorimer, D, Edwards, T, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2014-06-01
公開日2014-07-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structure of Putative uncharacterized protein (Rv0999 ortholog) from Mycobacterium smegmatis
To Be Published
8UOL
DownloadVisualize
BU of 8uol by Molmil
Crystal structure of human NUAK1-MARK3 (6 mutations) kinase domain chimera bound with small molecule inhibitor #31
分子名称: 1,2-ETHANEDIOL, MAP/microtubule affinity-regulating kinase 3, Narazaciclib
著者Delker, S.L, Abendroth, J.
登録日2023-10-19
公開日2024-10-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human NUAK1-MARK3 kinase domain chimera bound with small molecule inhibitor #31
To Be Published
8UOH
DownloadVisualize
BU of 8uoh by Molmil
Crystal structure of human NUAK1-MARK3 kinase domain chimera bound with small molecule inhibitor #10
分子名称: (6P)-6-[(4S)-imidazo[1,2-a]pyridin-3-yl]-4-[(1R)-1-phenylethyl]-2H-pyrido[3,2-b][1,4]oxazin-3(4H)-one, 1,2-ETHANEDIOL, MAP/microtubule affinity-regulating kinase 3, ...
著者Delker, S.L, Abendroth, J.
登録日2023-10-19
公開日2024-10-23
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of human NUAK1-MARK3 kinase domain chimera bound with small molecule inhibitor #10
To Be Published
8UOK
DownloadVisualize
BU of 8uok by Molmil
Crystal structure of human NUAK1-MARK3 (7 mutations) kinase domain chimera bound with small molecule inhibitor #31
分子名称: (6P)-6-[(4R)-imidazo[1,2-a]pyridin-3-yl]-4-(piperidin-4-yl)-2H-pyrido[3,2-b][1,4]oxazin-3(4H)-one, 1,2-ETHANEDIOL, MAP/microtubule affinity-regulating kinase 3
著者Delker, S.L, Abendroth, J, Fox III, D.D.
登録日2023-10-19
公開日2024-10-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Discovery of UCB9386 a Potent, Selective and Brain-Penetrant Nuak1 Inhibitor suitable for in vivo Pharmacological Studies
To Be Published
4TWR
DownloadVisualize
BU of 4twr by Molmil
Structure of UDP-glucose 4-epimerase from Brucella abortus
分子名称: NAD binding site:NAD-dependent epimerase/dehydratase:UDP-glucose 4-epimerase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Horanyi, P.S, Abendroth, J, Lorimer, D, Edwards, T, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2014-07-01
公開日2014-10-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of UDP-glucose 4-epimerase from Brucella melitensis
To Be Published
8UOI
DownloadVisualize
BU of 8uoi by Molmil
Crystal structure of human NUAK1-MARK3 kinase domain chimera bound with small molecule inhibitor #65
分子名称: (7M)-7-[(4S)-imidazo[1,2-b]pyridazin-3-yl]-1-[(1R)-1-phenylethyl]-3-(piperazin-1-yl)pyrido[3,4-b]pyrazin-2(1H)-one, 1,2-ETHANEDIOL, MAP/microtubule affinity-regulating kinase 3
著者Delker, S.L, Abendroth, J.
登録日2023-10-19
公開日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of human NUAK1-MARK3 kinase domain chimera bound with small molecule inhibitor #65
To Be Published
5IFU
DownloadVisualize
BU of 5ifu by Molmil
Crystal Structure of Prolyl-tRNA synthetase (ProRS, Proline--tRNA ligase) from Plasmodium falciparum in complex with Glyburide
分子名称: 1,2-ETHANEDIOL, 5-chloro-N-(2-{4-[(cyclohexylcarbamoyl)sulfamoyl]phenyl}ethyl)-2-methoxybenzamide, CHLORIDE ION, ...
著者Dranow, D.M, Hewitt, S.N, Abendroth, J, Structural Genomics Consortium (SGC)
登録日2016-02-26
公開日2016-11-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Biochemical and Structural Characterization of Selective Allosteric Inhibitors of the Plasmodium falciparum Drug Target, Prolyl-tRNA-synthetase.
ACS Infect Dis, 3, 2017
2QV8
DownloadVisualize
BU of 2qv8 by Molmil
Structure of the minor pseudopilin EpsH from the Type 2 Secretion System of Vibrio cholerae
分子名称: General secretion pathway protein H
著者Yanez, M.E, Korotkov, K.V, Abendroth, J, Hol, W.G.J.
登録日2007-08-07
公開日2008-02-26
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the minor pseudopilin EpsH from the Type 2 secretion system of Vibrio cholerae.
J.Mol.Biol., 377, 2008
2RET
DownloadVisualize
BU of 2ret by Molmil
The crystal structure of a binary complex of two pseudopilins: EpsI and EpsJ from the Type 2 Secretion System of Vibrio vulnificus
分子名称: CHLORIDE ION, EpsJ, Pseudopilin EpsI, ...
著者Yanez, M.E, Korotkov, K.V, Abendroth, J, Hol, W.G.J.
登録日2007-09-27
公開日2008-02-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献The crystal structure of a binary complex of two pseudopilins: EpsI and EpsJ from the type 2 secretion system of Vibrio vulnificus.
J.Mol.Biol., 375, 2008
4XUX
DownloadVisualize
BU of 4xux by Molmil
Structure of ampC bound to RPX-7009 at 1.75 A
分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, Beta-lactamase, ...
著者Clifton, M.C, Abendroth, J.
登録日2015-01-26
公開日2015-04-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Discovery of a Cyclic Boronic Acid beta-Lactamase Inhibitor (RPX7009) with Utility vs Class A Serine Carbapenemases.
J.Med.Chem., 58, 2015
4XIN
DownloadVisualize
BU of 4xin by Molmil
X-ray Crystal Structure of an LpqH orthologue from Mycobacterium avium
分子名称: LpqH orthologue, SODIUM ION
著者Fairman, J.W, Abendroth, J, Lorimer, D, Edwards, T.E, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2015-01-07
公開日2015-03-04
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献X-ray Crystal Structure of an LpqH orthologue from Mycobacterium avium
To Be Published
6U94
DownloadVisualize
BU of 6u94 by Molmil
Structure of RND efflux system, outer membrane lipoprotein, NodT family from Burkholderia mallei ATCC 23344
分子名称: GLYCEROL, RND efflux system, outer membrane lipoprotein, ...
著者Horanyi, P.S, Fox III, D, Abendroth, J, Lorimer, D, Edwards, T, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2019-09-06
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of RND efflux system, outer membrane lipoprotein, NodT family from Burkholderia mallei ATCC 23344
To Be Published
4DR8
DownloadVisualize
BU of 4dr8 by Molmil
Crystal structure of a peptide deformylase from Synechococcus elongatus
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, FORMIC ACID, ...
著者Lorimer, D, Abendroth, J, Craig, T, Burgin, A, Segall, A, Rohwer, F.
登録日2012-02-17
公開日2013-03-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure and function of a cyanophage-encoded peptide deformylase.
ISME J, 7, 2013
4DR9
DownloadVisualize
BU of 4dr9 by Molmil
Crystal structure of a peptide deformylase from synechococcus elongatus in complex with actinonin
分子名称: ACTINONIN, BROMIDE ION, Peptide deformylase, ...
著者Lorimer, D, Abendroth, J, Craig, T, Burgin, A, Segall, A, Rohwler, F.
登録日2012-02-17
公開日2013-01-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and function of a cyanophage-encoded peptide deformylase.
ISME J, 7, 2013
7UP6
DownloadVisualize
BU of 7up6 by Molmil
Crystal structure of C-terminal domain of MSK1 in complex with in covalently bound literature RSK2 inhibitor pyrrolopyrimidine cyanoacrylamide compound 25 (co-crystal)
分子名称: (E)-3-(3-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)phenyl)-2-cyanoacrylamide bound form, OXAMIC ACID, Ribosomal protein S6 kinase alpha-5
著者Yano, J.K, Abendroth, J, Hall, A.
登録日2022-04-14
公開日2022-08-31
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery and Characterization of a Novel Series of Chloropyrimidines as Covalent Inhibitors of the Kinase MSK1.
Acs Med.Chem.Lett., 13, 2022
7UP4
DownloadVisualize
BU of 7up4 by Molmil
Crystal structure of C-terminal Domain of MSK1 in complex with covalently bound pyrrolopyrimidine compound 20 (co-crystal)
分子名称: (5M)-5-(2,5-dichloropyrimidin-4-yl)-5H-pyrrolo[3,2-d]pyrimidine, Ribosomal protein S6 kinase alpha-5
著者Yano, J.K, Abendroth, J, Hall, A.
登録日2022-04-14
公開日2022-07-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Discovery and Characterization of a Novel Series of Chloropyrimidines as Covalent Inhibitors of the Kinase MSK1.
Acs Med.Chem.Lett., 13, 2022
7UP8
DownloadVisualize
BU of 7up8 by Molmil
Crystal structure of C-terminal Domain of MSK1 in complex with covalently bound pyrrolopyrimidine compound 27 (co-crystal)
分子名称: (5M)-5-(5-bromo-2-chloropyrimidin-4-yl)-5H-pyrrolo[3,2-d]pyrimidine, Ribosomal protein S6 kinase alpha-5
著者Yano, J.K, Abendroth, J, Hall, A.
登録日2022-04-14
公開日2022-07-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Discovery and Characterization of a Novel Series of Chloropyrimidines as Covalent Inhibitors of the Kinase MSK1.
Acs Med.Chem.Lett., 13, 2022
7UP7
DownloadVisualize
BU of 7up7 by Molmil
Crystal structure of C-terminal Domain of MSK1 in complex with covalently bound with literature RSK2 inhibitor indazole cyanoacrylamide compound 26 (soak)
分子名称: (2S)-2-cyano-N-(1-hydroxy-2-methylpropan-2-yl)-3-[3-(3,4,5-trimethoxyphenyl)-1H-indazol-5-yl]propanamide, Ribosomal protein S6 kinase alpha-5
著者Yano, J.K, Abendroth, J, Hall, A.
登録日2022-04-14
公開日2022-07-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discovery and Characterization of a Novel Series of Chloropyrimidines as Covalent Inhibitors of the Kinase MSK1.
Acs Med.Chem.Lett., 13, 2022
4KMS
DownloadVisualize
BU of 4kms by Molmil
Crystal structure of Acetoacetyl-CoA reductase from Rickettsia felis
分子名称: Acetoacetyl-CoA reductase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID), Abendroth, J, Lukacs, C, Edwards, T.E, Lorimer, D.
登録日2013-05-08
公開日2013-05-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of acetoacetyl-CoA reductase from Rickettsia felis.
Acta Crystallogr.,Sect.F, 77, 2021

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon