Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1209 件

4FM7
DownloadVisualize
BU of 4fm7 by Molmil
Crystal Structure of BACE with Compound 14g
分子名称: 4-{[(5R,7S)-1-(3-fluorophenyl)-3,7-dimethyl-2,2-dioxido-2-thia-1,3,8-triazaspiro[4.5]dec-8-yl]methyl}-2-(propan-2-yloxy)phenol, Beta-secretase 1, ZINC ION
著者Vajdos, F.F, Varghese, A.H.
登録日2012-06-15
公開日2012-10-03
最終更新日2013-06-19
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Spirocyclic sulfamides as beta-secretase 1 (BACE-1) inhibitors for the treatment of Alzheimer's disease: utilization of structure based drug design, WaterMap, and CNS penetration studies to identify centrally efficacious inhibitors.
J.Med.Chem., 55, 2012
5LM8
DownloadVisualize
BU of 5lm8 by Molmil
Crystal structure of a laccase-like multicopper oxidase McoG from from Aspergillus niger
分子名称: 'Multicopper oxidase, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ferraroni, M, Briganti, F, Tamayo-Ramos, J.A, van Berkel, W.J.H, Westphal, A.H.
登録日2016-07-29
公開日2017-05-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and function of Aspergillus niger laccase McoG
Biocatalysis, 2017
5O1J
DownloadVisualize
BU of 5o1j by Molmil
Lytic transglycosylase in action
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-1,6-anhydro-N-acetyl-beta-D-glucopyranosamine, Putative soluble lytic murein transglycosylase, ZINC ION
著者Williams, A.H, Rateau, L, Hoauz, A, Boneca, I.G.
登録日2017-05-18
公開日2018-03-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A step-by-stepin crystalloguide to bond cleavage and 1,6-anhydro-sugar product synthesis by a peptidoglycan-degrading lytic transglycosylase.
J. Biol. Chem., 293, 2018
5LWJ
DownloadVisualize
BU of 5lwj by Molmil
Solution NMR structure of the GTP binding Class II RNA aptamer-ligand-complex containing a protonated adenine nucleotide with a highly shifted pKa.
分子名称: GTP Class II RNA (34-MER), GUANOSINE-5'-TRIPHOSPHATE
著者Wolter, A.C, Weickhmann, A.K, Nasiri, A.H, Hantke, K, Ohlenschlaeger, O, Wunderlich, C.H, Kreutz, C, Duchardt-Ferner, E, Woehnert, J.
登録日2016-09-17
公開日2016-12-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Stably Protonated Adenine Nucleotide with a Highly Shifted pKa Value Stabilizes the Tertiary Structure of a GTP-Binding RNA Aptamer.
Angew. Chem. Int. Ed. Engl., 56, 2017
5M5H
DownloadVisualize
BU of 5m5h by Molmil
RIBOSOME-BOUND YIDC INSERTASE
分子名称: Membrane protein insertase YidC
著者Kedrov, A, Wickles, S, Crevenna, A.H, van der Sluis, E, Buschauer, R, Berninghausen, O, Lamb, D.C, Beckmann, R.
登録日2016-10-21
公開日2016-12-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural Dynamics of the YidC:Ribosome Complex during Membrane Protein Biogenesis.
Cell Rep, 17, 2016
5O2N
DownloadVisualize
BU of 5o2n by Molmil
Lytic transglycosylase in action
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, CITRATE ANION, ...
著者Williams, A.H, Hoauz, A, Boneca, I.G.
登録日2017-05-22
公開日2018-03-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.513 Å)
主引用文献A step-by-stepin crystalloguide to bond cleavage and 1,6-anhydro-sugar product synthesis by a peptidoglycan-degrading lytic transglycosylase.
J. Biol. Chem., 293, 2018
5NX2
DownloadVisualize
BU of 5nx2 by Molmil
Crystal structure of thermostabilised full-length GLP-1R in complex with a truncated peptide agonist at 3.7 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glucagon-like peptide 1 receptor, ...
著者Rappas, M, Jazayeri, A, Brown, A.J.H, Kean, J, Errey, J.C, Robertson, N, Fiez-Vandal, C, Andrews, S.P, Congreve, M, Bortolato, A, Mason, J.S, Baig, A.H, Teobald, I, Dore, A.S, Weir, M, Cooke, R.M, Marshall, F.H.
登録日2017-05-09
公開日2017-06-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Crystal structure of the GLP-1 receptor bound to a peptide agonist.
Nature, 546, 2017
8Q68
DownloadVisualize
BU of 8q68 by Molmil
Crystal structure of TEAD1-YBD in complex with irreversible compound SWTX-143
分子名称: Transcriptional enhancer factor TEF-1, ~{N}-[(3~{S})-5-azanyl-1-[4-(trifluoromethyl)phenyl]-3,4-dihydro-2~{H}-quinolin-3-yl]propanamide
著者Ciesielski, F, Spieser, S.A.H, Marchand, A, Gwaltney, S.L.
登録日2023-08-11
公開日2023-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献A Novel Irreversible TEAD Inhibitor, SWTX-143, Blocks Hippo Pathway Transcriptional Output and Causes Tumor Regression in Preclinical Mesothelioma Models.
Mol.Cancer Ther., 23, 2024
5MPQ
DownloadVisualize
BU of 5mpq by Molmil
Bulgecin A: The key to a broad-spectrum inhibitor that targets lytic transglycosylases
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 4-O-(4-O-SULFONYL-N-ACETYLGLUCOSAMININYL)-5-METHYLHYDROXY-L-PROLINE-TAURINE, MAGNESIUM ION, ...
著者Williams, A.H.
登録日2016-12-17
公開日2017-03-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Bulgecin A: The Key to a Broad-Spectrum Inhibitor That Targets Lytic Transglycosylases.
Antibiotics, 6, 2017
8OTK
DownloadVisualize
BU of 8otk by Molmil
Structure of ClpC Q11P N-terminal Domain
分子名称: ATP-dependent Clp protease ATP-binding subunit ClpC / Negative regulator of tic competence clcC/mecB, CARBONATE ION, GLYCEROL, ...
著者Evans, N.J, Isaacson, R.L, Camp, A.H.
登録日2023-04-21
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献A novel ClpC-ClpP adaptor protein that functions in the developing Bacillus subtilis spore
To Be Published
5LWX
DownloadVisualize
BU of 5lwx by Molmil
Crystal structure of the H253D mutant of McoG from Aspergillus niger
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, ...
著者Ferraroni, M, Briganti, F, Tamayo-Ramos, J.A, van Berkel, W.J.H, Westphal, A.H.
登録日2016-09-19
公開日2017-05-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Structure and function of Aspergillus niger laccase McoG
Biocatalysis, 2017
6JP7
DownloadVisualize
BU of 6jp7 by Molmil
Human antibody 32D6 Fab in complex with PEG
分子名称: (2R)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid, HEXAETHYLENE GLYCOL, immunoglobulin Fab heavy chain, ...
著者Lee, C.C, Ko, T.P, Lin, L.L, Wang, A.H.J.
登録日2019-03-26
公開日2020-02-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.909 Å)
主引用文献Structural basis of polyethylene glycol recognition by antibody.
J.Biomed.Sci., 27, 2020
5O29
DownloadVisualize
BU of 5o29 by Molmil
Lytic transglycosylase in action
分子名称: Transglycosylase
著者Williams, A.H, Hoauz, A, Boneca, I.G.
登録日2017-05-19
公開日2018-03-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.3785 Å)
主引用文献A step-by-stepin crystalloguide to bond cleavage and 1,6-anhydro-sugar product synthesis by a peptidoglycan-degrading lytic transglycosylase.
J. Biol. Chem., 293, 2018
6H5F
DownloadVisualize
BU of 6h5f by Molmil
LtgA disordered Helix
分子名称: Putative soluble lytic murein transglycosylase
著者Williams, A.H.
登録日2018-07-24
公開日2019-08-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Defective lytic transglycosylase disrupts cell morphogenesis by hindering cell wall de-O-acetylation inNeisseria meningitidis.
Elife, 9, 2020
8SJF
DownloadVisualize
BU of 8sjf by Molmil
Apo Structure of Computationally Designed Homotrimer Tet4
分子名称: Tet4
著者Hoffnagle, A.H, Tezcan, F.A.
登録日2023-04-18
公開日2023-07-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Atomically Accurate Design of Metalloproteins with Predefined Coordination Geometries.
J.Am.Chem.Soc., 145, 2023
8S9F
DownloadVisualize
BU of 8s9f by Molmil
Crystal structure of the kinase domain of Bruton's Tyrosine Kinase bound to dasatinib
分子名称: N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE, Tyrosine-protein kinase BTK
著者Lin, D.Y, Andreotti, A.H.
登録日2023-03-28
公開日2023-08-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Conformational heterogeneity of the BTK PHTH domain drives multiple regulatory states.
Elife, 12, 2024
8S93
DownloadVisualize
BU of 8s93 by Molmil
Crystal structure of the PH-TH/kinase complex of Bruton's tyrosine kinase
分子名称: 2-[3'-(hydroxymethyl)-1-methyl-5-({5-[(2S)-2-methyl-4-(oxetan-3-yl)piperazin-1-yl]pyridin-2-yl}amino)-6-oxo[1,6-dihydro[3,4'-bipyridine]]-2'-yl]-7,7-dimethyl-3,4,7,8-tetrahydro-2H-cyclopenta[4,5]pyrrolo[1,2-a]pyrazin-1(6H)-one, GLYCEROL, Tyrosine-protein kinase BTK, ...
著者Lin, D.Y, Andreotti, A.H.
登録日2023-03-27
公開日2023-08-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Conformational heterogeneity of the BTK PHTH domain drives multiple regulatory states.
Elife, 12, 2024
5O2O
DownloadVisualize
BU of 5o2o by Molmil
Lytic transglycosylase in action
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Transglycosylase
著者Williams, A.H, Hoauz, A, Boneca, I.G.
登録日2017-05-22
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Lytic transglycosylase in action
To Be Published
5O24
DownloadVisualize
BU of 5o24 by Molmil
Lytic transglycosylase in action
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Transglycosylase
著者Williams, A.H, Hoauz, A, Boneca, I.G.
登録日2017-05-19
公開日2018-03-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.429 Å)
主引用文献A step-by-stepin crystalloguide to bond cleavage and 1,6-anhydro-sugar product synthesis by a peptidoglycan-degrading lytic transglycosylase.
J. Biol. Chem., 293, 2018
5LWW
DownloadVisualize
BU of 5lww by Molmil
Crystal structure of a laccase-like multicopper oxidase McoG from Aspergillus niger bound to zinc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Ferraroni, M, Briganti, F, Tamayo-Ramos, J.A, van Berkel, W.J.H, Westphal, A.H.
登録日2016-09-19
公開日2017-05-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure and function of Aspergillus niger laccase McoG
Biocatalysis, 2017
6JU0
DownloadVisualize
BU of 6ju0 by Molmil
Mouse antibody 3.3 Fab in complex with PEG
分子名称: 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Fab heavy chain, ...
著者Lee, C.C, Ko, T.P, Lin, L.L, Wang, A.H.J.
登録日2019-04-12
公開日2020-02-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Structural basis of polyethylene glycol recognition by antibody.
J.Biomed.Sci., 27, 2020
6JXG
DownloadVisualize
BU of 6jxg by Molmil
Crystasl Structure of Beta-glucosidase D2-BGL from Chaetomella Raphigera
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-glucosidase, alpha-D-mannopyranose
著者Wang, A.H.-J, Lee, C.C, Kao, M.R, Ho, T.H.D.
登録日2019-04-23
公開日2019-11-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Chaetomella raphigerabeta-glucosidase D2-BGL has intriguing structural features and a high substrate affinity that renders it an efficient cellulase supplement for lignocellulosic biomass hydrolysis.
Biotechnol Biofuels, 12, 2019
6JWC
DownloadVisualize
BU of 6jwc by Molmil
Mouse antibody 2B5 Fab in complex with PEG
分子名称: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, DI(HYDROXYETHYL)ETHER, DODECAETHYLENE GLYCOL, ...
著者Lee, C.C, Ko, T.P, Su, Y.C, Lin, L.L, Roffler, S.R, Wang, A.H.J.
登録日2019-04-19
公開日2020-02-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.297 Å)
主引用文献Structural basis of polyethylene glycol recognition by antibody.
J.Biomed.Sci., 27, 2020
2FRI
DownloadVisualize
BU of 2fri by Molmil
Horse Heart Myoglobin, Nitrite Adduct, Co-crystallized
分子名称: Myoglobin, NITRITE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Copeland, D.M, Soares, A.S, West, A.H, Richter-Addo, G.B.
登録日2006-01-19
公開日2006-05-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of the nitrite and nitric oxide complexes of horse heart myoglobin.
J.Inorg.Biochem., 100, 2006
2FR5
DownloadVisualize
BU of 2fr5 by Molmil
Crystal Structure of Mouse Cytidine Deaminase Complexed with Tetrahydrouridine
分子名称: Cytidine deaminase, SULFATE ION, TETRAHYDROURIDINE, ...
著者Teh, A.H.
登録日2006-01-19
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献The 1.48 A Resolution Crystal Structure of the Homotetrameric Cytidine Deaminase from Mouse
Biochemistry, 45, 2006

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon