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PDB: 1498 results

8G1M
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BU of 8g1m by Molmil
Lectin domain of SasG (Staphylococcus aureus Surface protein G)
Descriptor: CALCIUM ION, E domain-containing protein
Authors:Maciag, J.J, Herr, A.B.
Deposit date:2023-02-02
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Mechanistic basis of staphylococcal interspecies competition for skin colonization
To Be Published
8G1L
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BU of 8g1l by Molmil
Lectin domain of Aap (Staphylococcus epidermidis Accumulation Associated Protein)
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, Accumulation associated protein, CALCIUM ION, ...
Authors:Maciag, J.J, Herr, A.B.
Deposit date:2023-02-02
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Mechanistic basis of staphylococcal interspecies competition for skin colonization
To Be Published
4B62
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BU of 4b62 by Molmil
The structure of the cell wall anchor of the T6SS from Pseudomonas aeruginosa
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, TSSL1
Authors:Robb, C.S, Carlson, M, Nano, F.E, Boraston, A.B.
Deposit date:2012-08-08
Release date:2013-10-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of the Periplasmic Peptidoglycan Binding Anchor of a T6Ss from Pseudomonas Aeruginosa.
To be Published
8DF2
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BU of 8df2 by Molmil
The structure of the 'ALT' construct of the Amuc_1438 glycopeptidase
Descriptor: CALCIUM ION, NPCBM/NEW2 domain-containing protein, SODIUM ION, ...
Authors:Medley, B.J, Boraston, A.B.
Deposit date:2022-06-21
Release date:2022-08-31
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
J.Biol.Chem., 298, 2022
8DEK
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BU of 8dek by Molmil
The structure of the glycopeptidase catalytic domain including the linker of Amuc_1438
Descriptor: 1,2-ETHANEDIOL, NPCBM/NEW2 domain-containing protein, SODIUM ION, ...
Authors:Medley, B.J, Boraston, A.B.
Deposit date:2022-06-20
Release date:2022-08-31
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
J.Biol.Chem., 298, 2022
4B28
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BU of 4b28 by Molmil
Crystal structure of DMSP lyase RdDddP from Roseobacter denitrificans
Descriptor: FE (III) ION, METALLOPEPTIDASE, FAMILY M24, ...
Authors:Hehemann, J.H, Law, A, Redecke, L, Boraston, A.B.
Deposit date:2012-07-12
Release date:2012-07-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Structure of Rddddp from Roseobacter Denitrificans Reveals that Dmsp Lyases in the Dddp-Family are Metalloenzymes.
Plos One, 9, 2014
4B29
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BU of 4b29 by Molmil
Crystal structures of DMSP lyases RdDddP and RnDddQII
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, DIMETHYLSULFONIOPROPIONATE LYASE, ...
Authors:Hehemann, J.H, Law, A, Redecke, L, Boraston, A.B.
Deposit date:2012-07-12
Release date:2012-07-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal Structures of Dmsp Lyases Rddddp and Rndddqii
To be Published
4AFT
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BU of 4aft by Molmil
Aplysia californica AChBP in complex with Varenicline
Descriptor: SOLUBLE ACETYLCHOLINE RECEPTOR, VARENICLINE
Authors:Rucktooa, P, Haseler, C.A, vanElke, R, Smit, A.B, Gallagher, T, Sixma, T.K.
Deposit date:2012-01-23
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Characterization of Binding Mode of Smoking Cessation Drugs to Nicotinic Acetylcholine Receptors Through Study of Ligand Complexes with Acetylcholine-Binding Protein.
J.Biol.Chem., 287, 2012
4BQT
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BU of 4bqt by Molmil
Aplysia californica AChBP in complex with Cytisine
Descriptor: (1R,5S)-1,2,3,4,5,6-HEXAHYDRO-8H-1,5-METHANOPYRIDO[1,2-A][1,5]DIAZOCIN-8-ONE, CHLORIDE ION, COBALT (II) ION, ...
Authors:Rucktooa, P, Haseler, C.A, vanElke, R, Smit, A.B, Gallagher, T, Sixma, T.K.
Deposit date:2013-06-02
Release date:2013-06-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Structural Characterization of Binding Mode of Smoking Cessation Drugs to Nicotinic Acetylcholine Receptors Through Study of Ligand Complexes with Acetylcholine-Binding Protein.
J.Biol.Chem., 287, 2012
8GA8
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BU of 8ga8 by Molmil
Structure of the yeast (HDAC) Rpd3L complex
Descriptor: Histone deacetylase RPD3, Transcriptional regulatory protein DEP1, Transcriptional regulatory protein PHO23, ...
Authors:Patel, A.B, Radhakrishnan, I, He, Y.
Deposit date:2023-02-22
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of the Saccharomyces cerevisiae Rpd3L histone deacetylase complex.
Nat Commun, 14, 2023
8D0Z
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BU of 8d0z by Molmil
S728-1157 IgG in complex with SARS-CoV-2-6P-Mut7 Spike protein (focused refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, S728-1157 Fab heavy chain variable region, S728-1157 Fab light chain variable region, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2022-05-26
Release date:2023-03-22
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Site of vulnerability on SARS-CoV-2 spike induces broadly protective antibody against antigenically distinct Omicron subvariants.
J.Clin.Invest., 133, 2023
8GJE
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BU of 8gje by Molmil
HIV-1 Env subtype C CZA97.12 SOSIP.664 in complex with 3BNC117 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3BNC117 Fab heavy chain, ...
Authors:Ozorowski, G, Lee, J.H, Ward, A.B.
Deposit date:2023-03-15
Release date:2023-10-18
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Glycan heterogeneity as a cause of the persistent fraction in HIV-1 neutralization.
Plos Pathog., 19, 2023
4BMQ
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BU of 4bmq by Molmil
Crystal Structure of Ribonucleotide Reductase apo-NrdF from Bacillus cereus (space group C2)
Descriptor: FE (II) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA
Authors:Tomter, A.B, Hersleth, H.-P, Hammerstad, M, Rohr, A.K, Andersson, K.K.
Deposit date:2013-05-10
Release date:2014-03-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Bacillus Cereus Class Ib Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi.
Acs Chem.Biol., 9, 2014
4BQ3
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BU of 4bq3 by Molmil
Structural analysis of an exo-beta-agarase
Descriptor: B-AGARASE, CALCIUM ION, GLYCEROL, ...
Authors:Pluvinage, B, Hehemann, J.H, Boraston, A.B.
Deposit date:2013-05-29
Release date:2013-08-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate Recognition and Hydrolysis by a Family 50 Exo-Beta-Agarase Aga50D from the Marine Bacterium Saccharophagus Degradans
J.Biol.Chem., 288, 2013
8DC0
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BU of 8dc0 by Molmil
Rat Betaglycan Zona Pellucida Domain (ZPC) in complex with mini monomer TGFb2 (mmTGF-b2-7M2R)
Descriptor: Transforming growth factor beta receptor type 3, Transforming growth factor beta-2
Authors:Wieteska, L, Taylor, A.B, Hinck, A.P.
Deposit date:2022-06-15
Release date:2023-06-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Rat Betaglycan Zona Pellucida Domain (ZPC) in complex with mini monomer TGFb2 (mmTGF-b2-7M2R)
To Be Published
4C21
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BU of 4c21 by Molmil
L-Fucose Isomerase In Complex With Fucitol
Descriptor: 1,2-ETHANEDIOL, FUCITOL, L-FUCOSE ISOMERASE, ...
Authors:Higgins, M.A, Suits, M.D.L, Marsters, C, Boraston, A.B.
Deposit date:2013-08-16
Release date:2013-12-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural and Functional Analysis of Fucose-Processing Enzymes from Streptococcus Pneumoniae.
J.Mol.Biol., 426, 2014
4BMT
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BU of 4bmt by Molmil
Crystal Structure of Ribonucleotide Reductase di-iron NrdF from Bacillus cereus
Descriptor: FE (II) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA
Authors:Hersleth, H.-P, Tomter, A.B, Hammerstad, M, Rohr, A.K, Andersson, K.K.
Deposit date:2013-05-10
Release date:2014-03-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Bacillus Cereus Class Ib Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi.
Acs Chem.Biol., 9, 2014
4C23
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BU of 4c23 by Molmil
L-fuculose kinase
Descriptor: 1,2-ETHANEDIOL, L-FUCULOSE KINASE FUCK
Authors:Higgins, M.A, Suits, M.D.L, Marsters, C, Boraston, A.B.
Deposit date:2013-08-16
Release date:2013-12-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Functional Analysis of Fucose-Processing Enzymes from Streptococcus Pneumoniae.
J.Mol.Biol., 426, 2014
4BMU
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BU of 4bmu by Molmil
Crystal Structure of Ribonucleotide Reductase di-manganese(II) NrdF from Bacillus cereus
Descriptor: MANGANESE (II) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA
Authors:Hersleth, H.-P, Tomter, A.B, Hammerstad, M, Rohr, A.K, Andersson, K.K.
Deposit date:2013-05-10
Release date:2014-03-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Bacillus Cereus Class Ib Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi.
Acs Chem.Biol., 9, 2014
4C24
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BU of 4c24 by Molmil
L-fuculose 1-phosphate aldolase
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, L-FUCULOSE PHOSPHATE ALDOLASE, ...
Authors:Higgins, M.A, Suits, M.D.L, Marsters, C, Boraston, A.B.
Deposit date:2013-08-16
Release date:2013-12-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Functional Analysis of Fucose-Processing Enzymes from Streptococcus Pneumoniae.
J.Mol.Biol., 426, 2014
4AWD
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BU of 4awd by Molmil
Crystal structure of the beta-porphyranase BpGH16B (BACPLE_01689) from the human gut bacterium Bacteroides plebeius
Descriptor: BETA-PORPHYRANASE, CALCIUM ION, GLYCEROL
Authors:Hehemann, J.H, Kelly, A.G, Pudlo, N.A, Martens, E.C, Boraston, A.B.
Deposit date:2012-06-01
Release date:2012-07-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes.
Proc. Natl. Acad. Sci. U.S.A., 109, 2012
4CC5
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BU of 4cc5 by Molmil
Fragment-Based Discovery of 6 Azaindazoles As Inhibitors of Bacterial DNA Ligase
Descriptor: 2-chloranyl-6-(1H-1,2,4-triazol-3-yl)pyrazine, DNA LIGASE, SULFATE ION
Authors:Howard, S, Amin, N, Benowitz, A.B, Chiarparin, E, Cui, H, Deng, X, Heightman, T.D, Holmes, D.J, Hopkins, A, Huang, J, Jin, Q, Kreatsoulas, C, Martin, A.C.L, Massey, F, McCloskey, L, Mortenson, P.N, Pathuri, P, Tisi, D, Williams, P.A.
Deposit date:2013-10-18
Release date:2014-06-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Fragment-Based Discovery of 6-Azaindazoles as Inhibitors of Bacterial DNA Ligase.
Acs Med.Chem.Lett., 4, 2013
4C18
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BU of 4c18 by Molmil
The structure of the Tsi2 dimer with a disulfide bond
Descriptor: TSI2
Authors:Robb, C.S, Nano, F.E, Boraston, A.B.
Deposit date:2013-08-10
Release date:2014-08-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:The Structure of Tse2 in Complex with Tsi2
To be Published
8EAQ
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BU of 8eaq by Molmil
Structure of the full-length IP3R1 channel determined at high Ca2+
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, CALCIUM ION, Inositol 1,4,5-trisphosphate receptor type 1, ...
Authors:Fan, G, Baker, M.R, Terry, L.E, Arige, V, Chen, M, Seryshev, A.B, Baker, M.L, Ludtke, S.J, Yule, D.I, Serysheva, I.I.
Deposit date:2022-08-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Conformational motions and ligand-binding underlying gating and regulation in IP 3 R channel.
Nat Commun, 13, 2022
8EAR
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BU of 8ear by Molmil
Structure of the full-length IP3R1 channel determined in the presence of Calcium/IP3/ATP
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Fan, G, Baker, M.R, Terry, L.E, Arige, V, Chen, M, Seryshev, A.B, Baker, M.L, Ludtke, S.J, Yule, D.I, Serysheva, I.I.
Deposit date:2022-08-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Conformational motions and ligand-binding underlying gating and regulation in IP 3 R channel.
Nat Commun, 13, 2022

222926

数据于2024-07-24公开中

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