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PDB: 1498 件

8G1M
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BU of 8g1m by Molmil
Lectin domain of SasG (Staphylococcus aureus Surface protein G)
分子名称: CALCIUM ION, E domain-containing protein
著者Maciag, J.J, Herr, A.B.
登録日2023-02-02
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Mechanistic basis of staphylococcal interspecies competition for skin colonization
To Be Published
8G1L
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BU of 8g1l by Molmil
Lectin domain of Aap (Staphylococcus epidermidis Accumulation Associated Protein)
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, Accumulation associated protein, CALCIUM ION, ...
著者Maciag, J.J, Herr, A.B.
登録日2023-02-02
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Mechanistic basis of staphylococcal interspecies competition for skin colonization
To Be Published
4B62
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The structure of the cell wall anchor of the T6SS from Pseudomonas aeruginosa
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, TSSL1
著者Robb, C.S, Carlson, M, Nano, F.E, Boraston, A.B.
登録日2012-08-08
公開日2013-10-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal Structure of the Periplasmic Peptidoglycan Binding Anchor of a T6Ss from Pseudomonas Aeruginosa.
To be Published
8DF2
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BU of 8df2 by Molmil
The structure of the 'ALT' construct of the Amuc_1438 glycopeptidase
分子名称: CALCIUM ION, NPCBM/NEW2 domain-containing protein, SODIUM ION, ...
著者Medley, B.J, Boraston, A.B.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
J.Biol.Chem., 298, 2022
8DEK
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BU of 8dek by Molmil
The structure of the glycopeptidase catalytic domain including the linker of Amuc_1438
分子名称: 1,2-ETHANEDIOL, NPCBM/NEW2 domain-containing protein, SODIUM ION, ...
著者Medley, B.J, Boraston, A.B.
登録日2022-06-20
公開日2022-08-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
J.Biol.Chem., 298, 2022
4B28
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BU of 4b28 by Molmil
Crystal structure of DMSP lyase RdDddP from Roseobacter denitrificans
分子名称: FE (III) ION, METALLOPEPTIDASE, FAMILY M24, ...
著者Hehemann, J.H, Law, A, Redecke, L, Boraston, A.B.
登録日2012-07-12
公開日2012-07-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The Structure of Rddddp from Roseobacter Denitrificans Reveals that Dmsp Lyases in the Dddp-Family are Metalloenzymes.
Plos One, 9, 2014
4B29
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Crystal structures of DMSP lyases RdDddP and RnDddQII
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, DIMETHYLSULFONIOPROPIONATE LYASE, ...
著者Hehemann, J.H, Law, A, Redecke, L, Boraston, A.B.
登録日2012-07-12
公開日2012-07-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal Structures of Dmsp Lyases Rddddp and Rndddqii
To be Published
4AFT
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BU of 4aft by Molmil
Aplysia californica AChBP in complex with Varenicline
分子名称: SOLUBLE ACETYLCHOLINE RECEPTOR, VARENICLINE
著者Rucktooa, P, Haseler, C.A, vanElke, R, Smit, A.B, Gallagher, T, Sixma, T.K.
登録日2012-01-23
公開日2012-05-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Characterization of Binding Mode of Smoking Cessation Drugs to Nicotinic Acetylcholine Receptors Through Study of Ligand Complexes with Acetylcholine-Binding Protein.
J.Biol.Chem., 287, 2012
4BQT
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BU of 4bqt by Molmil
Aplysia californica AChBP in complex with Cytisine
分子名称: (1R,5S)-1,2,3,4,5,6-HEXAHYDRO-8H-1,5-METHANOPYRIDO[1,2-A][1,5]DIAZOCIN-8-ONE, CHLORIDE ION, COBALT (II) ION, ...
著者Rucktooa, P, Haseler, C.A, vanElke, R, Smit, A.B, Gallagher, T, Sixma, T.K.
登録日2013-06-02
公開日2013-06-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Structural Characterization of Binding Mode of Smoking Cessation Drugs to Nicotinic Acetylcholine Receptors Through Study of Ligand Complexes with Acetylcholine-Binding Protein.
J.Biol.Chem., 287, 2012
8GA8
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BU of 8ga8 by Molmil
Structure of the yeast (HDAC) Rpd3L complex
分子名称: Histone deacetylase RPD3, Transcriptional regulatory protein DEP1, Transcriptional regulatory protein PHO23, ...
著者Patel, A.B, Radhakrishnan, I, He, Y.
登録日2023-02-22
公開日2023-07-12
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of the Saccharomyces cerevisiae Rpd3L histone deacetylase complex.
Nat Commun, 14, 2023
8D0Z
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BU of 8d0z by Molmil
S728-1157 IgG in complex with SARS-CoV-2-6P-Mut7 Spike protein (focused refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, S728-1157 Fab heavy chain variable region, S728-1157 Fab light chain variable region, ...
著者Ozorowski, G, Torres, J.L, Ward, A.B.
登録日2022-05-26
公開日2023-03-22
最終更新日2023-05-03
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Site of vulnerability on SARS-CoV-2 spike induces broadly protective antibody against antigenically distinct Omicron subvariants.
J.Clin.Invest., 133, 2023
8GJE
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BU of 8gje by Molmil
HIV-1 Env subtype C CZA97.12 SOSIP.664 in complex with 3BNC117 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3BNC117 Fab heavy chain, ...
著者Ozorowski, G, Lee, J.H, Ward, A.B.
登録日2023-03-15
公開日2023-10-18
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Glycan heterogeneity as a cause of the persistent fraction in HIV-1 neutralization.
Plos Pathog., 19, 2023
4BMQ
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BU of 4bmq by Molmil
Crystal Structure of Ribonucleotide Reductase apo-NrdF from Bacillus cereus (space group C2)
分子名称: FE (II) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA
著者Tomter, A.B, Hersleth, H.-P, Hammerstad, M, Rohr, A.K, Andersson, K.K.
登録日2013-05-10
公開日2014-03-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Bacillus Cereus Class Ib Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi.
Acs Chem.Biol., 9, 2014
4BQ3
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BU of 4bq3 by Molmil
Structural analysis of an exo-beta-agarase
分子名称: B-AGARASE, CALCIUM ION, GLYCEROL, ...
著者Pluvinage, B, Hehemann, J.H, Boraston, A.B.
登録日2013-05-29
公開日2013-08-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Substrate Recognition and Hydrolysis by a Family 50 Exo-Beta-Agarase Aga50D from the Marine Bacterium Saccharophagus Degradans
J.Biol.Chem., 288, 2013
8DC0
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BU of 8dc0 by Molmil
Rat Betaglycan Zona Pellucida Domain (ZPC) in complex with mini monomer TGFb2 (mmTGF-b2-7M2R)
分子名称: Transforming growth factor beta receptor type 3, Transforming growth factor beta-2
著者Wieteska, L, Taylor, A.B, Hinck, A.P.
登録日2022-06-15
公開日2023-06-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Rat Betaglycan Zona Pellucida Domain (ZPC) in complex with mini monomer TGFb2 (mmTGF-b2-7M2R)
To Be Published
4C21
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BU of 4c21 by Molmil
L-Fucose Isomerase In Complex With Fucitol
分子名称: 1,2-ETHANEDIOL, FUCITOL, L-FUCOSE ISOMERASE, ...
著者Higgins, M.A, Suits, M.D.L, Marsters, C, Boraston, A.B.
登録日2013-08-16
公開日2013-12-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and Functional Analysis of Fucose-Processing Enzymes from Streptococcus Pneumoniae.
J.Mol.Biol., 426, 2014
4BMT
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BU of 4bmt by Molmil
Crystal Structure of Ribonucleotide Reductase di-iron NrdF from Bacillus cereus
分子名称: FE (II) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA
著者Hersleth, H.-P, Tomter, A.B, Hammerstad, M, Rohr, A.K, Andersson, K.K.
登録日2013-05-10
公開日2014-03-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Bacillus Cereus Class Ib Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi.
Acs Chem.Biol., 9, 2014
4C23
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BU of 4c23 by Molmil
L-fuculose kinase
分子名称: 1,2-ETHANEDIOL, L-FUCULOSE KINASE FUCK
著者Higgins, M.A, Suits, M.D.L, Marsters, C, Boraston, A.B.
登録日2013-08-16
公開日2013-12-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and Functional Analysis of Fucose-Processing Enzymes from Streptococcus Pneumoniae.
J.Mol.Biol., 426, 2014
4BMU
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BU of 4bmu by Molmil
Crystal Structure of Ribonucleotide Reductase di-manganese(II) NrdF from Bacillus cereus
分子名称: MANGANESE (II) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA
著者Hersleth, H.-P, Tomter, A.B, Hammerstad, M, Rohr, A.K, Andersson, K.K.
登録日2013-05-10
公開日2014-03-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Bacillus Cereus Class Ib Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi.
Acs Chem.Biol., 9, 2014
4C24
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BU of 4c24 by Molmil
L-fuculose 1-phosphate aldolase
分子名称: 1,2-ETHANEDIOL, GLYCEROL, L-FUCULOSE PHOSPHATE ALDOLASE, ...
著者Higgins, M.A, Suits, M.D.L, Marsters, C, Boraston, A.B.
登録日2013-08-16
公開日2013-12-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Functional Analysis of Fucose-Processing Enzymes from Streptococcus Pneumoniae.
J.Mol.Biol., 426, 2014
4AWD
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BU of 4awd by Molmil
Crystal structure of the beta-porphyranase BpGH16B (BACPLE_01689) from the human gut bacterium Bacteroides plebeius
分子名称: BETA-PORPHYRANASE, CALCIUM ION, GLYCEROL
著者Hehemann, J.H, Kelly, A.G, Pudlo, N.A, Martens, E.C, Boraston, A.B.
登録日2012-06-01
公開日2012-07-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes.
Proc. Natl. Acad. Sci. U.S.A., 109, 2012
4CC5
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BU of 4cc5 by Molmil
Fragment-Based Discovery of 6 Azaindazoles As Inhibitors of Bacterial DNA Ligase
分子名称: 2-chloranyl-6-(1H-1,2,4-triazol-3-yl)pyrazine, DNA LIGASE, SULFATE ION
著者Howard, S, Amin, N, Benowitz, A.B, Chiarparin, E, Cui, H, Deng, X, Heightman, T.D, Holmes, D.J, Hopkins, A, Huang, J, Jin, Q, Kreatsoulas, C, Martin, A.C.L, Massey, F, McCloskey, L, Mortenson, P.N, Pathuri, P, Tisi, D, Williams, P.A.
登録日2013-10-18
公開日2014-06-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Fragment-Based Discovery of 6-Azaindazoles as Inhibitors of Bacterial DNA Ligase.
Acs Med.Chem.Lett., 4, 2013
4C18
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BU of 4c18 by Molmil
The structure of the Tsi2 dimer with a disulfide bond
分子名称: TSI2
著者Robb, C.S, Nano, F.E, Boraston, A.B.
登録日2013-08-10
公開日2014-08-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献The Structure of Tse2 in Complex with Tsi2
To be Published
8EAQ
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BU of 8eaq by Molmil
Structure of the full-length IP3R1 channel determined at high Ca2+
分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, CALCIUM ION, Inositol 1,4,5-trisphosphate receptor type 1, ...
著者Fan, G, Baker, M.R, Terry, L.E, Arige, V, Chen, M, Seryshev, A.B, Baker, M.L, Ludtke, S.J, Yule, D.I, Serysheva, I.I.
登録日2022-08-29
公開日2022-11-23
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Conformational motions and ligand-binding underlying gating and regulation in IP 3 R channel.
Nat Commun, 13, 2022
8EAR
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BU of 8ear by Molmil
Structure of the full-length IP3R1 channel determined in the presence of Calcium/IP3/ATP
分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Fan, G, Baker, M.R, Terry, L.E, Arige, V, Chen, M, Seryshev, A.B, Baker, M.L, Ludtke, S.J, Yule, D.I, Serysheva, I.I.
登録日2022-08-29
公開日2022-11-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Conformational motions and ligand-binding underlying gating and regulation in IP 3 R channel.
Nat Commun, 13, 2022

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件を2024-07-24に公開中

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