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PDB: 89346 results

8BM3
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BU of 8bm3 by Molmil
H207A mutant of E. coli PgpB, a PAP2 type phosphatidyl glycerol phosphate and C55-PP phosphatase, in complex with farnesyl pyrophosphate
Descriptor: FARNESYL DIPHOSPHATE, Phosphatidylglycerophosphatase B
Authors:Delbrassine, F, El Ghachi, M, Lambion, A, Herman, R, Kerff, F.
Deposit date:2022-11-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:H207A mutant of E. coli PgpB, a PAP2 type phosphatidyl glycerol phosphate and C55-PP phosphatase, in complex with farnesyl pyrophosphate
To Be Published
4TU3
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BU of 4tu3 by Molmil
Crystal structure of yeast Sac1/Vps74 complex
Descriptor: Phosphoinositide phosphatase SAC1, Vacuolar protein sorting-associated protein 74
Authors:Cai, Y, Horenkamp, F.A, Reinisch, K.R.
Deposit date:2014-06-23
Release date:2014-08-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.187 Å)
Cite:Sac1-Vps74 structure reveals a mechanism to terminate phosphoinositide signaling in the Golgi apparatus.
J.Cell Biol., 206, 2014
8VS8
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BU of 8vs8 by Molmil
Crystal structure of ADI-19425 Fab in complex with anti-idiotypic 1D3 Fab
Descriptor: 1D3 Heavy Chain, 1D3 Light Chain, ADI-19425 Heavy Chain, ...
Authors:Kher, G, Homad, L.J, McGuire, A.T, Pancera, M.
Deposit date:2024-01-23
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:A novel RSV vaccine candidate derived from anti-idiotypic antibodies targets putative neutralizing B-cells in bulk PBMCs
To Be Published
6B2I
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BU of 6b2i by Molmil
E45A mutant of the HIV-1 capsid protein
Descriptor: CHLORIDE ION, HIV-1 capsid protein, IODIDE ION
Authors:Gres, A.T, Kirby, K.A, Sarafianos, S.G.
Deposit date:2017-09-20
Release date:2018-09-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Multidisciplinary studies with mutated HIV-1 capsid proteins reveal structural mechanisms of lattice stabilization.
Nat Commun, 14, 2023
7T3X
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BU of 7t3x by Molmil
Structure of unphosphorylated Pediculus humanus (Ph) PINK1 D334A mutant
Descriptor: Serine/threonine-protein kinase PINK1
Authors:Gan, Z.Y, Leis, A, Dewson, G, Glukhova, A, Komander, D.
Deposit date:2021-12-09
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.53 Å)
Cite:Activation mechanism of PINK1.
Nature, 602, 2022
6YEU
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BU of 6yeu by Molmil
Second EH domain of AtEH1/Pan1
Descriptor: CALCIUM ION, Calcium-binding EF hand family protein
Authors:Yperman, K, Papageorgiou, A, Evangelidis, T, Van Damme, D, Tripsianes, K.
Deposit date:2020-03-25
Release date:2021-03-31
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Distinct EH domains of the endocytic TPLATE complex confer lipid and protein binding.
Nat Commun, 12, 2021
6B2S
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BU of 6b2s by Molmil
Crystal structure of Xanthomonas campestris OleA H285N
Descriptor: 3-oxoacyl-[ACP] synthase III, GLYCEROL, PHOSPHATE ION
Authors:Jensen, M.R, Goblirsch, B.R, Esler, M.A, Christenson, J.K, Mohamed, F.A, Wackett, L.P, Wilmot, C.M.
Deposit date:2017-09-20
Release date:2018-02-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:The role of OleA His285 in orchestration of long-chain acyl-coenzyme A substrates.
FEBS Lett., 592, 2018
7T88
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BU of 7t88 by Molmil
Crystal Structure of the C-terminal Domain of the Phosphate Acetyltransferase from Escherichia coli
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, IODIDE ION, ...
Authors:Kim, Y, Dementiev, A, Welk, L, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-12-15
Release date:2021-12-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of c from Escherichia coli
To Be Published
7KJO
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BU of 7kjo by Molmil
crystal structure of PLEKHA7 PH domain biding SO4
Descriptor: GLYCEROL, Pleckstrin homology domain-containing family A member 7, SULFATE ION
Authors:Marassi, F.M, Aleshin, A.E, Liddington, R.C.
Deposit date:2020-10-26
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural basis for the association of PLEKHA7 with membrane-embedded phosphatidylinositol lipids.
Structure, 29, 2021
3MNA
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BU of 3mna by Molmil
The crystal structure of human carbonic anhydrase Ii in complex with a 1,3,5-triazine-substituted benzenesulfonamide inhibitor
Descriptor: Carbonic anhydrase 2, GLYCEROL, ZINC ION, ...
Authors:Avvaru, B.S, Wagner, J, Robbins, A.H, Mckenna, R.
Deposit date:2010-04-21
Release date:2011-04-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Sulfonamides incorporating 1,3,5-triazine moieties selectively and potently inhibit carbonic anhydrase transmembrane isoforms IX, XII and XIV over cytosolic isoforms I and II: Solution and X-ray crystallographic studies.
Bioorg.Med.Chem., 19, 2011
6B3K
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BU of 6b3k by Molmil
Crystal structure of mutant Spinach RNA aptamer in complex with Fab BL3-6
Descriptor: Heavy chain of Fab BL3-6, Light chain of Fab BL3-6, MAGNESIUM ION, ...
Authors:DasGupta, S, Koirala, D, Shelke, S.A, Piccirilli, J.A.
Deposit date:2017-09-22
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Affinity maturation of a portable Fab-RNA module for chaperone-assisted RNA crystallography.
Nucleic Acids Res., 46, 2018
2UXD
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BU of 2uxd by Molmil
Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA CGGG in the context of the Thermus thermophilus 30S subunit.
Descriptor: 16S RIBOSOMAL RNA, A-SITE MESSENGER RNA FRAGMENT CGGG, ANTICODON STEM-LOOP OF TRANSFER RNA WITH ANTICODON CCCG, ...
Authors:Dunham, C.M, Selmer, M, Phelps, S.S, Kelley, A.C, Suzuki, T, Joseph, S, Ramakrishnan, V.
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of Trnas with an Expanded Anticodon Loop in the Decoding Center of the 30S Ribosomal Subunit.
RNA, 13, 2007
6FAP
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BU of 6fap by Molmil
Crystal structure of human BAZ2A PHD zinc finger in complex with Fr23
Descriptor: Bromodomain adjacent to zinc finger domain protein 2A, GLYCEROL, PHOSPHATE ION, ...
Authors:Amato, A, Lucas, X, Bortoluzzi, A, Wright, D, Ciulli, A.
Deposit date:2017-12-16
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Targeting Ligandable Pockets on Plant Homeodomain (PHD) Zinc Finger Domains by a Fragment-Based Approach.
ACS Chem. Biol., 13, 2018
6YET
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BU of 6yet by Molmil
Second EH domain of AtEH1/Pan1
Descriptor: CALCIUM ION, Calcium-binding EF hand family protein
Authors:Yperman, K, Papageorgiou, A, Evangelidis, T, Van Damme, D, Tripsianes, K.
Deposit date:2020-03-25
Release date:2021-03-31
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Distinct EH domains of the endocytic TPLATE complex confer lipid and protein binding.
Nat Commun, 12, 2021
3MOF
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BU of 3mof by Molmil
The structure of rat cytosolic PEPCK mutant A467G in complex with oxalate and GTP
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Johnson, T.A, Holyoak, T.
Deposit date:2010-04-22
Release date:2010-06-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Increasing the conformational entropy of the Omega-loop lid domain in phosphoenolpyruvate carboxykinase impairs catalysis and decreases catalytic fidelity .
Biochemistry, 49, 2010
3MNS
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BU of 3mns by Molmil
Investigation of global and local effects of radiation damage on porcine pancreatic elastase. Third stage of radiation damage
Descriptor: Chymotrypsin-like elastase family member 1, SODIUM ION, SULFATE ION
Authors:Petrova, T, Ginell, S, Kim, Y, Joachimiak, G, Joachimiak, A.
Deposit date:2010-04-22
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:X-ray-induced deterioration of disulfide bridges at atomic resolution.
Acta Crystallogr.,Sect.D, 66, 2010
5GN9
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BU of 5gn9 by Molmil
Crystal structure of alternative oxidase from Trypanosoma brucei brucei complexed with cumarin derivative-17b
Descriptor: 4-butyl-7,8-bis(oxidanyl)chromen-2-one, Alternative oxidase, mitochondrial, ...
Authors:Balogun, E.O, Inaoka, D.K, Shiba, T, Tsuge, T, May, B, Sato, T, Kido, Y, Takeshi, N, Aoki, T, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Michels, P.A.M, Watanabe, Y, Moore, A.L, Harada, S, Kita, K.
Deposit date:2016-07-19
Release date:2017-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Discovery of trypanocidal coumarins with dual inhibition of both the glycerol kinase and alternative oxidase ofTrypanosoma brucei brucei.
Faseb J., 33, 2019
6YHZ
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BU of 6yhz by Molmil
UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain.
Descriptor: Transcription-repair-coupling factor
Authors:Kawale, A.A, Burmann, B.B.
Deposit date:2020-03-31
Release date:2020-10-21
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain.
Commun Biol, 3, 2020
3MO6
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BU of 3mo6 by Molmil
Investigation of global and local effects of radiation damage on porcine pancreatic elastase. Sixth stage of radiation damage
Descriptor: Chymotrypsin-like elastase family member 1, SODIUM ION, SULFATE ION
Authors:Petrova, T, Ginell, S, Kim, Y, Joachimiak, G, Joachimiak, A.
Deposit date:2010-04-22
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:X-ray-induced deterioration of disulfide bridges at atomic resolution.
Acta Crystallogr.,Sect.D, 66, 2010
6GT3
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BU of 6gt3 by Molmil
Crystal Structure of the A2A-StaR2-bRIL562 in complex with AZD4635 at 2.0A resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 6-(2-chloranyl-6-methyl-pyridin-4-yl)-5-(4-fluorophenyl)-1,2,4-triazin-3-amine, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, ...
Authors:Borodovsky, A, Wang, Y, Deng, N, Ye, M, Stephen, T.L, Goodwin, K, Goodwin, R, Strittmatter, N, Shaw, J, Sachsenmeier, K, Clarke, J.D, Hay, C, Reimer, C, Andrews, S.P, Brown, G.A, Congreve, M, Cheng, R.K.Y, Dore, A.S, Mason, J.S, Marshall, F.H, Weir, M.P, Lyne, P, Woessner, R.
Deposit date:2018-06-15
Release date:2019-06-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Small molecule AZD4635 inhibitor of A2AR signaling rescues immune cell function including CD103+ dendritic cells enhancing anti-tumor immunity
J Immunother Cancer, 2020
6YI2
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BU of 6yi2 by Molmil
UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain.
Descriptor: DNA helicase
Authors:Kawale, A.A, Burmann, B.B.
Deposit date:2020-03-31
Release date:2020-10-21
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain.
Commun Biol, 3, 2020
3MOC
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BU of 3moc by Molmil
Investigation of global and local effects of radiation damage on porcine pancreatic elastase. Eighth stage of radiation damage
Descriptor: Chymotrypsin-like elastase family member 1, SODIUM ION, SULFATE ION
Authors:Petrova, T, Ginell, S, Kim, Y, Joachimiak, G, Joachimiak, A.
Deposit date:2010-04-22
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:X-ray-induced deterioration of disulfide bridges at atomic resolution.
Acta Crystallogr.,Sect.D, 66, 2010
5CNA
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BU of 5cna by Molmil
REFINED STRUCTURE OF CONCANAVALIN A COMPLEXED WITH ALPHA-METHYL-D-MANNOPYRANOSIDE AT 2.0 ANGSTROMS RESOLUTION AND COMPARISON WITH THE SACCHARIDE-FREE STRUCTURE
Descriptor: CALCIUM ION, CHLORIDE ION, CONCANAVALIN A, ...
Authors:Naismith, J.H, Emmerich, C, Habash, J, Harrop, S.J, Helliwell, J.R, Hunter, W.N, Raftery, J, Kalb(Gilboa), A.J, Yariv, J.
Deposit date:1994-02-11
Release date:1994-05-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Refined structure of concanavalin A complexed with methyl alpha-D-mannopyranoside at 2.0 A resolution and comparison with the saccharide-free structure.
Acta Crystallogr.,Sect.D, 50, 1994
6SRI
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BU of 6sri by Molmil
Structure of the Fanconi anaemia core complex
Descriptor: Fanconi anaemia protein FANCL, Unassigned secondary structure elements (base region, proposed FANCC-FANC-E-FANCF), ...
Authors:Shakeel, S, Rajendra, E, Alcon, P, He, S, Scheres, S.H.W, Passmore, L.A.
Deposit date:2019-09-05
Release date:2019-11-06
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of the Fanconi anaemia monoubiquitin ligase complex.
Nature, 575, 2019
6VJY
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BU of 6vjy by Molmil
Cryo-EM structure of Hrd1/Hrd3 monomer
Descriptor: ERAD-associated E3 ubiquitin-protein ligase HRD1, ERAD-associated E3 ubiquitin-protein ligase component HRD3
Authors:Wu, X, Rapoport, T.A.
Deposit date:2020-01-18
Release date:2020-04-29
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural basis of ER-associated protein degradation mediated by the Hrd1 ubiquitin ligase complex.
Science, 368, 2020

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