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PDB: 89111 results

4R10
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BU of 4r10 by Molmil
A conserved phosphorylation switch controls the interaction between cadherin and beta-catenin in vitro and in vivo
Descriptor: 1,2-ETHANEDIOL, Cadherin-related hmr-1, Protein humpback-2, ...
Authors:Choi, H.-J, Loveless, T, Lynch, A, Bang, I, Hardin, J, Weis, W.I.
Deposit date:2014-08-03
Release date:2015-04-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Conserved Phosphorylation Switch Controls the Interaction between Cadherin and beta-Catenin In Vitro and In Vivo
Dev.Cell, 33, 2015
6IVQ
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BU of 6ivq by Molmil
Crystal structure of a membrane protein S19A
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
Authors:Kittredge, A, Fukuda, F, Zhang, Y, Yang, T.
Deposit date:2018-12-04
Release date:2019-11-06
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Dual Ca2+-dependent gates in human Bestrophin1 underlie disease-causing mechanisms of gain-of-function mutations.
Commun Biol, 2, 2019
4RGX
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BU of 4rgx by Molmil
Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with 3,4-dihydroxy bezoic acid
Descriptor: 1,2-ETHANEDIOL, 3,4-DIHYDROXYBENZOIC ACID, CHLORIDE ION, ...
Authors:Kim, Y, Joachimiak, G, Bigelow, L, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-30
Release date:2015-03-04
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with 3,4-dihydroxy bezoic acid
To be Published, 2014
8JZ1
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BU of 8jz1 by Molmil
Crystal structure of a single-chain monellin mutant C41V
Descriptor: Monellin chain B,Monellin chain A
Authors:Yasui, N, Ohnuma, K, Yamashita, A.
Deposit date:2023-07-04
Release date:2023-10-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.239 Å)
Cite:Investigating the Effect of Substituting a Single Cysteine Residue on the Thermal Stability of an Engineered Sweet Protein, Single-Chain Monellin.
Protein J., 42, 2023
6ETT
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BU of 6ett by Molmil
Crystal structure of KDM4D with tetrazole compound 4
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 4D, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-10-27
Release date:2019-02-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.257 Å)
Cite:Structure-Based Screening of Tetrazolylhydrazide Inhibitors versus KDM4 Histone Demethylases.
Chemmedchem, 14, 2019
6SA8
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BU of 6sa8 by Molmil
ring-like DARPin-Armadillo fusion H83_D01
Descriptor: 1,2-ETHANEDIOL, LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG, ring-like DARPin-Armadillo fusion H83_D01
Authors:Ernst, P, Honegger, A, van der Valk, F, Ewald, C, Mittl, P.R.E, Plucktun, A.
Deposit date:2019-07-16
Release date:2019-11-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rigid fusions of designed helical repeat binding proteins efficiently protect a binding surface from crystal contacts.
Sci Rep, 9, 2019
8DXM
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BU of 8dxm by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment 4-bromophenol at the Knuckles site
Descriptor: 1,2-ETHANEDIOL, 4-BROMOPHENOL, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, ...
Authors:Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
Deposit date:2022-08-02
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
5XHV
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BU of 5xhv by Molmil
Crystal Structure Of Fab S40 In Complex With Influenza Hemagglutinin, HA1 subunit.
Descriptor: Hemagglutinin, S40 heavy chain, S40 light chain
Authors:Lee, C.C, Wang, A.H.J, Yu, C.M, Yang, A.S.
Deposit date:2017-04-24
Release date:2017-11-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:High throughput discovery of influenza virus neutralizing antibodies from phage-displayed synthetic antibody libraries.
Sci Rep, 7, 2017
5X4X
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BU of 5x4x by Molmil
Mutant human thymidylate synthase A191K crystallized in a sulfate-containing condition
Descriptor: SULFATE ION, Thymidylate synthase
Authors:Chen, D, Jansson, A, Larsson, A, Nordlund, P.
Deposit date:2017-02-14
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural analyses of human thymidylate synthase reveal a site that may control conformational switching between active and inactive states
J. Biol. Chem., 292, 2017
5JLZ
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BU of 5jlz by Molmil
Crystal structure of HLA-DRB1*04:01 in complex with modified alpha-enolase peptide 26-40 with citrulline at the position 32
Descriptor: Alpha-enolase, HLA class II histocompatibility antigen, DR alpha chain, ...
Authors:Dubnovitsky, A, Kozhukh, G, Sandalova, T, Achour, A.
Deposit date:2016-04-28
Release date:2016-12-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Functional and Structural Characterization of a Novel HLA-DRB1*04:01-Restricted alpha-Enolase T Cell Epitope in Rheumatoid Arthritis.
Front Immunol, 7, 2016
4RGQ
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BU of 4rgq by Molmil
Crystal structure of the Methanocaldococcus jannaschii G1PDH with NADPH and DHAP
Descriptor: 1,2-ETHANEDIOL, 1,3-DIHYDROXYACETONEPHOSPHATE, Glycerol-1-phosphate dehydrogenase, ...
Authors:Carbone, V, Ronimus, R.S, Schofield, L.R, Sutherland-Smith, A.J.
Deposit date:2014-09-30
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure and Evolution of the Archaeal Lipid Synthesis Enzyme sn-Glycerol-1-phosphate Dehydrogenase.
J.Biol.Chem., 290, 2015
4RH0
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BU of 4rh0 by Molmil
Spore photoproduct lyase C140A/S76C mutant with bound AdoMet
Descriptor: 1,2-ETHANEDIOL, IRON/SULFUR CLUSTER, SULFATE ION, ...
Authors:Benjdia, A, Heil, K, Winkler, A, Carell, T, Schlichting, I.
Deposit date:2014-10-01
Release date:2014-10-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Rescuing DNA repair activity by rewiring the H-atom transfer pathway in the radical SAM enzyme, spore photoproduct lyase.
Chem.Commun.(Camb.), 50, 2014
4RH1
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BU of 4rh1 by Molmil
Spore photoproduct lyase C140A/S76C mutant with bound AdoMet and dinucleoside spore photoproduct
Descriptor: 1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-[[(5R)-1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-methyl-2,4-bis(oxidanylidene)-1,3-diazinan-5-yl]methyl]pyrimidine-2,4-dione, IRON/SULFUR CLUSTER, SULFATE ION, ...
Authors:Benjdia, A, Heil, K, Winkler, A, Carell, T, Schlichting, I.
Deposit date:2014-10-01
Release date:2014-10-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Rescuing DNA repair activity by rewiring the H-atom transfer pathway in the radical SAM enzyme, spore photoproduct lyase.
Chem.Commun.(Camb.), 50, 2014
6VGV
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BU of 6vgv by Molmil
Crystal structure of VidaL intein
Descriptor: GLYCEROL, VidaL
Authors:Burton, A.J, Haugbro, M, Parisi, E, Muir, T.W.
Deposit date:2020-01-09
Release date:2020-05-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Live-cell protein engineering with an ultra-short split intein.
Proc.Natl.Acad.Sci.USA, 117, 2020
6EV0
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BU of 6ev0 by Molmil
The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with a ring-fused 2-pyridone (AC129)
Descriptor: ISOPROPYL ALCOHOL, Listeriolysin regulatory protein, [(3~{R})-3-carboxy-7-(naphthalen-1-ylmethyl)-5-oxidanylidene-2,3-dihydro-[1,3]thiazolo[3,2-a]pyridin-8-yl]-dimethyl-azanium, ...
Authors:Begum, A, Hall, M, Grundstrom, C, Cairns, A.G, Kulen, M, Lindgren, M, Johansson, J, Almqvist, F, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2017-10-31
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based Design of Inhibitors Targeting PrfA, the Master Virulence Regulator of Listeria monocytogenes.
J. Med. Chem., 61, 2018
8AF2
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BU of 8af2 by Molmil
Human Sterol Carrier Protein with unnatural amino acid 2,2'-bipyridine alanine incorporated at position 111
Descriptor: COPPER (II) ION, Enoyl-CoA hydratase 2, FRAGMENT OF TRITON X-100, ...
Authors:Richardson, J.M, Klemencic, E, Jarvis, A.G.
Deposit date:2022-07-15
Release date:2023-08-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Using BpyAla to generate copper artificial metalloenzymes: a catalytic and structural study.
Catalysis Science And Technology, 14, 2024
7UO4
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BU of 7uo4 by Molmil
SARS-CoV-2 replication-transcription complex bound to Remdesivir triphosphate, in a pre-catalytic state
Descriptor: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ...
Authors:Malone, B.F, Perry, J.K, Appleby, T.C, Feng, J.Y, Campbell, E.A, Darst, S.A.
Deposit date:2022-04-12
Release date:2022-11-30
Last modified:2023-03-08
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural basis for substrate selection by the SARS-CoV-2 replicase.
Nature, 614, 2023
7UOB
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BU of 7uob by Molmil
SARS-CoV-2 replication-transcription complex bound to GTP, in a pre-catalytic state
Descriptor: 3'-DEOXYURIDINE-5'-MONOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Malone, B.F, Perry, J.K, Appleby, T.C, Feng, J.Y, Campbell, E.A, Darst, S.A.
Deposit date:2022-04-12
Release date:2022-11-30
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structural basis for substrate selection by the SARS-CoV-2 replicase.
Nature, 614, 2023
6SEH
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BU of 6seh by Molmil
Recognition and processing of branched DNA substrates by Slx1-Slx4 nuclease
Descriptor: Structure-specific endonuclease subunit SLX1, Structure-specific endonuclease subunit SLX4, ZINC ION
Authors:Gaur, V, Zajko, W, Nirwal, S, Szlachcic, A, Gapinska, M, Nowotny, M.
Deposit date:2019-07-30
Release date:2019-09-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Recognition and processing of branched DNA substrates by Slx1-Slx4 nuclease.
Nucleic Acids Res., 47, 2019
7UO9
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BU of 7uo9 by Molmil
SARS-CoV-2 replication-transcription complex bound to UTP, in a pre-catalytic state
Descriptor: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ...
Authors:Malone, B.F, Perry, J.K, Appleby, T.C, Feng, J.Y, Campbell, E.A, Darst, S.A.
Deposit date:2022-04-12
Release date:2022-11-30
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural basis for substrate selection by the SARS-CoV-2 replicase.
Nature, 614, 2023
6SEU
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BU of 6seu by Molmil
X-ray structure of the gold/lysozyme adduct formed upon 21h exposure of protein crystals to compound 2
Descriptor: 1,2-ETHANEDIOL, GOLD ION, Lysozyme C, ...
Authors:Ferraro, G, Giorgio, A, Merlino, A.
Deposit date:2019-07-30
Release date:2019-09-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Protein-mediated disproportionation of Au(i): insights from the structures of adducts of Au(iii) compounds bearing N,N-pyridylbenzimidazole derivatives with lysozyme.
Dalton Trans, 48, 2019
8ARD
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BU of 8ard by Molmil
Myosin VI proximal tail domain, dimeric
Descriptor: Unconventional myosin-VI
Authors:Kikuti, C.M, Sirkia, H, Houdusse, A.
Deposit date:2022-08-16
Release date:2023-08-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.219 Å)
Cite:How myosin VI traps its off-state, is activated and dimerizes.
Nat Commun, 14, 2023
6SAB
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BU of 6sab by Molmil
M-BUTX-Ptr1a (Parabuthus transvaalicus)
Descriptor: M-BUTX-Ptr1a
Authors:Meudal, H, Landon, C, Delmas, A.F.
Deposit date:2019-07-16
Release date:2020-07-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A Venomics Approach Coupled to High-Throughput Toxin Production Strategies Identifies the First Venom-Derived Melanocortin Receptor Agonists.
J.Med.Chem., 63, 2020
8ASA
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BU of 8asa by Molmil
Crystal structure of AO75L
Descriptor: 1,2-ETHANEDIOL, BICINE, CALCIUM ION, ...
Authors:Laugeri, M.E, Speciale, I, Gimeno, A, Lin, S, Poveda, A, Lowary, T, Van Etten, J.L, Barbero, J.J, De Castro, C, Tonetti, M, Rojas, A.L.
Deposit date:2022-08-18
Release date:2023-08-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of AO75L
To Be Published
6IMV
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BU of 6imv by Molmil
The complex structure of endo-beta-1,2-glucanase from Talaromyces funiculosus with sophorose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Tanaka, N, Nakajima, M, Narukawa-Nara, M, Matsunaga, H, Kamisuki, S, Aramasa, H, Takahashi, Y, Sugimoto, N, Abe, K, Miyanaga, A, Yamashita, T, Sugawara, F, Kamakura, T, Komba, S, Nakai, H, Taguchi, H.
Deposit date:2018-10-23
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification, characterization, and structural analyses of a fungal endo-beta-1,2-glucanase reveal a new glycoside hydrolase family.
J.Biol.Chem., 294, 2019

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