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PDB: 89346 results

7QIY
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BU of 7qiy by Molmil
Specific features and methylation sites of a plant ribosome. 40S head ribosomal subunit.
Descriptor: 1,4-DIAMINOBUTANE, 18S rRNA head, 40S head ribosomal protein eS19, ...
Authors:Cottilli, P, Itoh, Y, Amunts, A.
Deposit date:2021-12-16
Release date:2022-06-15
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Cryo-EM structure and rRNA modification sites of a plant ribosome.
Plant Commun., 3, 2022
8FCS
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BU of 8fcs by Molmil
Structure of pre-miR-31 reveals an active role in Dicer processing
Descriptor: microRNA 31
Authors:Kotar, A, Ma, S, Keane, S.
Deposit date:2022-12-01
Release date:2023-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of pre-miR-31 reveals an active role in Dicer processing.
Biorxiv, 2023
7QXJ
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BU of 7qxj by Molmil
Solution structure of Tk-hefu-11
Descriptor: Tk-hefu-11
Authors:Mineev, K.S, Lushpa, V.A, Vassilevski, A.A, Gigolaev, A.M.
Deposit date:2022-01-26
Release date:2022-09-21
Last modified:2022-11-16
Method:SOLUTION NMR
Cite:Artificial pore blocker acts specifically on voltage-gated potassium channel isoform K V 1.6.
J.Biol.Chem., 298, 2022
7QX9
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BU of 7qx9 by Molmil
BAZ2A bromodomain in complex with acetylpyrrole derivative compound 65
Descriptor: 3-[[4-(4-ethanoyl-3,5-dimethyl-1~{H}-pyrrol-2-yl)-1,3-thiazol-2-yl]methyl]imidazolidine-2,4-dione, Bromodomain adjacent to zinc finger domain protein 2A
Authors:Dalle Vedove, A, Cazzanelli, G, Caflisch, A, Lolli, G.
Deposit date:2022-01-26
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Identification of a BAZ2A-Bromodomain Hit Compound by Fragment Growing.
Acs Med.Chem.Lett., 13, 2022
7Q7A
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BU of 7q7a by Molmil
Room temperature structure of RNase A at 120 MPa helium gas pressure in a sapphire capillary
Descriptor: CHLORIDE ION, Ribonuclease pancreatic, SODIUM ION, ...
Authors:Lieske, J, Guenther, S, Saouane, S, Meents, A.
Deposit date:2021-11-09
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Fixed-target high-pressure macromolecular crystallography
To Be Published
7Q77
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BU of 7q77 by Molmil
Room temperature structure of RNase A at 50 MPa helium gas pressure in a sapphire capillary
Descriptor: CHLORIDE ION, Ribonuclease pancreatic, SODIUM ION, ...
Authors:Lieske, J, Guenther, S, Saouane, S, Meents, A.
Deposit date:2021-11-09
Release date:2022-11-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fixed-target high-pressure macromolecular crystallography
To Be Published
7Q76
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BU of 7q76 by Molmil
Room temperature structure of RNase A at 22 MPa helium gas pressure in a sapphire capillary
Descriptor: CHLORIDE ION, Ribonuclease pancreatic, SODIUM ION, ...
Authors:Lieske, J, Guenther, S, Saouane, S, Meents, A.
Deposit date:2021-11-09
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Fixed-target high-pressure macromolecular crystallography
To Be Published
7Q79
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BU of 7q79 by Molmil
Room temperature structure of RNase A at 100 MPa helium gas pressure in a sapphire capillary
Descriptor: CHLORIDE ION, Ribonuclease pancreatic, SODIUM ION, ...
Authors:Lieske, J, Guenther, S, Saouane, S, Meents, A.
Deposit date:2021-11-09
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Fixed-target high-pressure macromolecular crystallography
To Be Published
7Q75
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BU of 7q75 by Molmil
Room temperature structure of RNase A at atmospheric pressure
Descriptor: CHLORIDE ION, Ribonuclease pancreatic, SODIUM ION, ...
Authors:Lieske, J, Guenther, S, Saouane, S, Meents, A.
Deposit date:2021-11-09
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Fixed-target high-pressure macromolecular crystallography
To Be Published
7Q78
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BU of 7q78 by Molmil
Room temperature structure of RNase A at 72 MPa helium gas pressure in a sapphire capillary
Descriptor: CHLORIDE ION, Ribonuclease pancreatic, SODIUM ION, ...
Authors:Lieske, J, Guenther, S, Saouane, S, Meents, A.
Deposit date:2021-11-09
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Fixed-target high-pressure macromolecular crystallography
To Be Published
7Q7B
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BU of 7q7b by Molmil
Room temperature structure of RNase A at atmospheric pressure in a sapphire capillary after high helium gas pressure release
Descriptor: CHLORIDE ION, Ribonuclease pancreatic, SODIUM ION, ...
Authors:Lieske, J, Guenther, S, Saouane, S, Meents, A.
Deposit date:2021-11-09
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Fixed-target high-pressure macromolecular crystallography
To Be Published
7QKN
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BU of 7qkn by Molmil
Crystal structure of YTHDF1 YTH domain in complex with the ebsulfur derivative compound 7
Descriptor: 1,2-ETHANEDIOL, THIOCYANATE ION, YTH domain-containing family protein 1, ...
Authors:Dalle Vedove, A, Cazzanelli, G, Quattrone, A, Provenzani, A, Lolli, G.
Deposit date:2021-12-18
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Small-Molecule Ebselen Binds to YTHDF Proteins Interfering with the Recognition of N 6 -Methyladenosine-Modified RNAs.
Acs Pharmacol Transl Sci, 5, 2022
7QHZ
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BU of 7qhz by Molmil
Crystal structure of KLK6 in complex with compound DKFZ917
Descriptor: (5~{R})-3-(4-carbamimidoylphenyl)-~{N}-[(1~{S})-1-naphthalen-1-ylpropyl]-2-oxidanylidene-1,3-oxazolidine-5-carboxamide, GLYCEROL, Kallikrein-6
Authors:Jagtap, P.K.A, Baumann, A, Lohbeck, J, Isak, D, Miller, A, Hennig, J.
Deposit date:2021-12-14
Release date:2022-11-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Scalable synthesis and structural characterization of reversible KLK6 inhibitors.
Rsc Adv, 12, 2022
7QL7
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BU of 7ql7 by Molmil
Crystal structure of YTHDF1 YTH domain in complex with the ebsulfur derivative compound 9
Descriptor: 1,2-ETHANEDIOL, THIOCYANATE ION, YTH domain-containing family protein 1, ...
Authors:Dalle Vedove, A, Cazzanelli, G, Quattrone, A, Provenzani, A, Lolli, G.
Deposit date:2021-12-19
Release date:2022-11-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Small-Molecule Ebselen Binds to YTHDF Proteins Interfering with the Recognition of N 6 -Methyladenosine-Modified RNAs.
Acs Pharmacol Transl Sci, 5, 2022
9ASO
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BU of 9aso by Molmil
Human Drosha and DGCR8 in complex with Pri-let-7a2
Descriptor: CALCIUM ION, Isoform 4 of Drosha, Microprocessor complex subunit DGCR8, ...
Authors:Garg, A, Joshua-Tor, L.
Deposit date:2024-02-26
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:RNAi_protein_a2
To Be Published
9EX1
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BU of 9ex1 by Molmil
X-ray structure of a polyoxidovanadate/lysozyme adduct obtained when the protein is treated with [VIVO(acac)2] in 1.1 M NaCl, 0.1 M sodium acetate at pH 4.0 (Structure B)
Descriptor: CHLORIDE ION, Lysozyme C, Polyoxidovanadate complex
Authors:Tito, G, Merlino, A, Ferraro, G.
Deposit date:2024-04-05
Release date:2024-06-26
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.785 Å)
Cite:Non-Covalent and Covalent Binding of New Mixed-Valence Cage-like Polyoxidovanadate Clusters to Lysozyme.
Angew.Chem.Int.Ed.Engl., 63, 2024
9C0Y
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BU of 9c0y by Molmil
Clathrin terminal domain complexed with Pitstop 2c
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Clathrin heavy chain 1, ...
Authors:Bulut, H, Horatscheck, A, Krauss, M, Santos, K.F, McCluskey, A, Wahl, C.W, Nazare, M, Haucke, V.
Deposit date:2024-05-28
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Acute inhibition of clathrin-mediated endocytosis by next-generation small molecule inhibitors of clathrin function
To Be Published
9BJU
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BU of 9bju by Molmil
Crystal structure of the complex between VHL, ElonginB, ElonginC, and compound 5
Descriptor: 1,2-ETHANEDIOL, 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, ACETATE ION, ...
Authors:Murray, J.M, Wu, H, Fuhrmann, J, Fairbrother, W.J, DiPasquale, A.
Deposit date:2024-04-25
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Potency-enhanced peptidomimetic VHL ligands with improved oral bioavailability
To Be Published
7OW8
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BU of 7ow8 by Molmil
CryoEM structure of the ABC transporter BmrA E504A mutant in complex with ATP-Mg
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Multidrug resistance ABC transporter ATP-binding/permease protein BmrA
Authors:Gobet, A, Schoehn, G, Falson, P, Chaptal, V.
Deposit date:2021-06-17
Release date:2022-01-19
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Substrate-bound and substrate-free outward-facing structures of a multidrug ABC exporter.
Sci Adv, 8, 2022
9EX2
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BU of 9ex2 by Molmil
X-ray structure of a polyoxidovanadate/lysozyme adduct obtained when the protein is treated with [VIVO(acac)2] in 1.1 M NaCl, 0.1 M sodium acetate at pH 4.0 (Structure C)
Descriptor: CHLORIDE ION, Lysozyme C, Polyoxidovanadate complex, ...
Authors:Tito, G, Merlino, A, Ferraro, G.
Deposit date:2024-04-05
Release date:2024-06-26
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.172 Å)
Cite:Non-Covalent and Covalent Binding of New Mixed-Valence Cage-like Polyoxidovanadate Clusters to Lysozyme.
Angew.Chem.Int.Ed.Engl., 63, 2024
9C3D
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BU of 9c3d by Molmil
Crystal structure of metallo-beta-lactamase superfamily protein CcrA-like_MBL-B1 from Dyadobacter fermentans
Descriptor: Metallo-beta-lactamase type 2, ZINC ION
Authors:Kim, Y, Maltseva, N, Welk, L, Endres, M, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-05-31
Release date:2024-07-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of metallo-beta-lactamase superfamily protein CcrA-like_MBL-B1 from Dyadobacter fermentans
To Be Published
9C0Z
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BU of 9c0z by Molmil
Clathrin terminal domain complexed with pitstop 2d
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ...
Authors:Bulut, H, Horatscheck, A, Krauss, M, Santos, K.F, McCluskey, A, Wahl, C.W, Nazare, M, Haucke, V.
Deposit date:2024-05-28
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Acute inhibition of clathrin-mediated endocytosis by next-generation small molecule inhibitors of clathrin function
To Be Published
9BJO
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BU of 9bjo by Molmil
Cryo-EM of Azo-ffsy fiber
Descriptor: D-peptide ffsy
Authors:Zia, A, Guo, J, Xu, B, Wang, F.
Deposit date:2024-04-25
Release date:2024-09-18
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cell-Free Nonequilibrium Assembly for Hierarchical Protein/Peptide Nanopillars.
J.Am.Chem.Soc., 146, 2024
9AYC
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BU of 9ayc by Molmil
Tetra-phosphorylated, E1435Q Ycf1 mutant in inward-facing wide conformation
Descriptor: Metal resistance protein YCF1
Authors:Carvalho, R.S.A, Rasel, M.S.I, Khandelwal, N.K, Tomasiak, T.M.
Deposit date:2024-03-07
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Cryo-EM structure of the tetra-phosphorylated R-domain in Ycf1 reveals key interactions for transport regulation
To Be Published
9EMC
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BU of 9emc by Molmil
RUVBL1/2 in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RuvB-like 1, ...
Authors:Lopez-Perrote, A, Llorca, O, Garcia-Martin, C.
Deposit date:2024-03-11
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Mechanism of allosteric inhibition of RUVBL1-RUVBL2 by the small-molecule CB-6644
Cell Rep Phys Sci, 2024

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PDB entries from 2024-10-09

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