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PDB: 89346 results

6R8S
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BU of 6r8s by Molmil
Crystal structure of aIF2gamma subunit I181K from archaeon Sulfolobus solfataricus complexed with GDPCP
Descriptor: FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
Authors:Kravchenko, O, Arkhipova, V, Gabdulkhakov, A, Stolboushkina, E, Nikonov, O, Garber, M, Nikonov, S.
Deposit date:2019-04-02
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Crystal structure of aIF2gamma subunit I181K from archaeon Sulfolobus solfataricus complexed with GDPCP
To Be Published
5EXG
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BU of 5exg by Molmil
Crystal structure of recombinant dimeric Banana lectin
Descriptor: BROMIDE ION, GLYCEROL, Ripening-associated protein
Authors:Struwe, W.B, Allison, T.A, Robinson, C.V, Benesch, J.L.P.B.
Deposit date:2015-11-23
Release date:2016-12-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Glycan cluster recognition by a potent anti-HIV lectin exploiting bidentate binding amplified by tetrameric architecture
To Be Published
5EXP
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BU of 5exp by Molmil
AAA+ domain of FleQ from Pseudomonas aeruginosa
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Transcriptional regulator FleQ
Authors:Navarro, M.V.A.S, Sondermann, H, Matsuyama, B.Y.
Deposit date:2015-11-24
Release date:2016-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 113, 2016
6DYS
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BU of 6dys by Molmil
C-terminal condensation domain of Ebony in complex with beta-alanyl-dopamine
Descriptor: CALCIUM ION, Ebony, N-[2-(3,4-dihydroxyphenyl)ethyl]-beta-alaninamide
Authors:Izore, T, Tailhades, J, Hansen, M.H, Kaczmarski, J.A, Jackson, C.J, Cryle, M.J.
Deposit date:2018-07-02
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Drosophila melanogasternonribosomal peptide synthetase Ebony encodes an atypical condensation domain.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
4QG2
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BU of 4qg2 by Molmil
Crystal structure of the tetrameric GTP/dATP/ATP-bound SAMHD1 (RN206) mutant catalytic core
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Koharudin, L.M.I, Wu, Y, DeLucia, M, Mehrens, J, Gronenborn, A.M, Ahn, J.
Deposit date:2014-05-22
Release date:2014-10-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014
6DYN
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BU of 6dyn by Molmil
C-terminal condensation domain of Ebony in complex with Histamine
Descriptor: CALCIUM ION, Ebony, HISTAMINE
Authors:Izore, T, Tailhades, J, Hansen, M.H, Kaczmarski, J.A, Jackson, C.J, Cryle, M.J.
Deposit date:2018-07-02
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Drosophila melanogasternonribosomal peptide synthetase Ebony encodes an atypical condensation domain.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5EZP
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BU of 5ezp by Molmil
Human transthyretin (TTR) complexed with 4-hydroxy-chalcone
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-chalcone, Transthyretin
Authors:Polsinelli, I, Nencetti, S, Shepard, W.E, Orlandini, E, Stura, E.A.
Deposit date:2015-11-26
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A new crystal form of human transthyretin obtained with a curcumin derived ligand.
J.Struct.Biol., 194, 2016
3LSW
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BU of 3lsw by Molmil
Aniracetam bound to the ligand binding domain of GluA3
Descriptor: 1-(4-METHOXYBENZOYL)-2-PYRROLIDINONE, GLUTAMIC ACID, GluA2 S1S2 domain, ...
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2010-02-13
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Piracetam Defines a New Binding Site for Allosteric Modulators of alpha-Amino-3-hydroxy-5-methyl-4-isoxazole-propionic Acid (AMPA) Receptors.
J.Med.Chem., 53, 2010
6DZL
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BU of 6dzl by Molmil
Ebola virus Makona variant GP (mucin-deleted) in complex with pan-ebolavirus human antibody ADI-15878 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ebola virus Makona GP1, ...
Authors:Murin, C.D, Ward, A.B.
Deposit date:2018-07-05
Release date:2018-09-12
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Structural Basis of Pan-Ebolavirus Neutralization by an Antibody Targeting the Glycoprotein Fusion Loop.
Cell Rep, 24, 2018
6R9N
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BU of 6r9n by Molmil
Peroxy diiron species of chemotaxis sensor ODP
Descriptor: CHLORIDE ION, FE (III) ION, OXYGEN ATOM, ...
Authors:Muok, A.R, Crane, B.R.
Deposit date:2019-04-03
Release date:2019-06-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.074 Å)
Cite:A di-iron protein recruited as an Fe[II] and oxygen sensor for bacterial chemotaxis functions by stabilizing an iron-peroxy species.
Proc.Natl.Acad.Sci.USA, 116, 2019
6P6M
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BU of 6p6m by Molmil
HCV NS3/4A protease domain of genotype 1a C159 in complex with glecaprevir
Descriptor: (3aR,7S,10S,12R,21E,24aR)-7-tert-butyl-N-[(1R,2R)-2-(difluoromethyl)-1-{[(1-methylcyclopropyl)sulfonyl]carbamoyl}cyclop ropyl]-20,20-difluoro-5,8-dioxo-2,3,3a,5,6,7,8,11,12,20,23,24a-dodecahydro-1H,10H-9,12-methanocyclopenta[18,19][1,10,17, 3,6]trioxadiazacyclononadecino[11,12-b]quinoxaline-10-carboxamide, CHLORIDE ION, ...
Authors:Timm, J, Schiffer, C.A.
Deposit date:2019-06-04
Release date:2020-06-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:HCV NS3/4A protease domain of genotype 1a in complex with glecaprevir
To Be Published
4X31
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BU of 4x31 by Molmil
Room temperature structure of bacteriorhodopsin from lipidic cubic phase obtained with serial millisecond crystallography using synchrotron radiation
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL
Authors:Nogly, P, James, D, Wang, D, White, T, Zatsepin, N, Shilova, A, Nelson, G, Liu, H, Johansson, L, Heymann, M, Jaeger, K, Metz, M, Wickstrand, C, Wu, W, Baath, P, Berntsen, P, Oberthuer, D, Panneels, V, Cherezov, V, Chapman, H, Spence, J, Schertler, G, Neutze, R, Moraes, I, Burghammer, M, Standfuss, J, Weierstall, U.
Deposit date:2014-11-27
Release date:2015-02-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Lipidic cubic phase serial millisecond crystallography using synchrotron radiation.
Iucrj, 2, 2015
5EZA
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BU of 5eza by Molmil
A de novo designed heptameric coiled coil CC-Hept-I18C-L22H
Descriptor: CC-Hept-C-H-I, GLYCEROL
Authors:Burton, A.J, Brady, R.L, Woolfson, D.N.
Deposit date:2015-11-26
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Installing hydrolytic activity into a completely de novo protein framework.
Nat.Chem., 8, 2016
6XG6
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BU of 6xg6 by Molmil
Full-length human mitochondrial Hsp90 (TRAP1) with ADP-BeF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Heat shock protein 75 kDa, ...
Authors:Liu, Y.X, Wang, F, Agard, D.A.
Deposit date:2020-06-17
Release date:2020-09-30
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:General and robust covalently linked graphene oxide affinity grids for high-resolution cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
5LE0
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BU of 5le0 by Molmil
MICAL1 Cterminal domain
Descriptor: Protein-methionine sulfoxide oxidase MICAL1
Authors:Hammich, H, Pylypenko, O, Houdusse, A.
Deposit date:2016-06-29
Release date:2017-03-01
Last modified:2017-03-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Oxidation of F-actin controls the terminal steps of cytokinesis.
Nat Commun, 8, 2017
6LD4
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BU of 6ld4 by Molmil
Zika NS5 polymerase domain
Descriptor: 2,4-dimethoxy-5-thiophen-2-yl-benzoic acid, 3-methoxybenzenesulfonamide, RNA-directed RNA polymerase NS5, ...
Authors:El Sahili, A, Lescar, J.
Deposit date:2019-11-20
Release date:2020-08-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Non-nucleoside Inhibitors of Zika Virus RNA-Dependent RNA Polymerase.
J.Virol., 94, 2020
4EUA
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BU of 4eua by Molmil
Succinyl-CoA:acetate CoA-transferase (AarCH6-R228E) in complex with CoA (anomalous dataset)
Descriptor: CHLORIDE ION, COENZYME A, Succinyl-CoA:acetate coenzyme A transferase
Authors:Mullins, E.A, Kappock, T.J.
Deposit date:2012-04-25
Release date:2012-10-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.398 Å)
Cite:Crystal Structures of Acetobacter aceti Succinyl-Coenzyme A (CoA):Acetate CoA-Transferase Reveal Specificity Determinants and Illustrate the Mechanism Used by Class I CoA-Transferases.
Biochemistry, 51, 2012
6RAN
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BU of 6ran by Molmil
Heterodimeric ABC exporter TmrAB in inward-facing wide conformation
Descriptor: Multidrug resistance ABC transporter ATP-binding and permease protein, Nanobody Nb9F10
Authors:Thomas, C, Januliene, D, Mehdipour, A.R, Hofmann, S, Hummer, G, Moeller, A, Tampe, R.
Deposit date:2019-04-06
Release date:2019-07-31
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Conformation space of a heterodimeric ABC exporter under turnover conditions.
Nature, 571, 2019
6DZ8
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BU of 6dz8 by Molmil
Crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (S75C)
Descriptor: Penicillin-binding protein 4, ZINC ION
Authors:Alexander, J.A.N, Strynadka, N.C.J.
Deposit date:2018-07-03
Release date:2018-12-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Recognition of Peptidoglycan Fragments by the Transpeptidase PBP4 FromStaphylococcus aureus.
Front Microbiol, 9, 2018
4X44
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BU of 4x44 by Molmil
Crystal Structure of Mutant R89Q of human Adenine phosphoribosyltransferase
Descriptor: ADENOSINE MONOPHOSPHATE, Adenine phosphoribosyltransferase, GLYCEROL, ...
Authors:Pimenta, A, Pereira, H.M, Mercaldi, G, Thiemann, O.H.
Deposit date:2014-12-02
Release date:2015-12-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.0535 Å)
Cite:Crystal Structure of Mutant R89Q of human Adenine phosphoribosyltransferase
To Be Published
6E0A
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BU of 6e0a by Molmil
Crystal Structure of Helicobacter pylori TlpA Chemoreceptor Ligand Binding Domain
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CALCIUM ION, CHLORIDE ION, ...
Authors:Remington, S.J, Guillemin, K, Sweeney, E, Perkins, A.
Deposit date:2018-07-06
Release date:2018-09-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structures of the ligand-binding domain of Helicobacter pylori chemoreceptor TlpA.
Protein Sci., 27, 2018
3LIN
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BU of 3lin by Molmil
crystal structure of HTLV protease complexed with the inhibitor, KNI-10562
Descriptor: N-[(2S,3S)-4-{(4R)-4-[(2,2-dimethylpropyl)carbamoyl]-5,5-dimethyl-1,3-thiazolidin-3-yl}-3-hydroxy-4-oxo-1-phenylbutan-2-yl]-N~2~-{(2S)-2-[(methoxycarbonyl)amino]-2-phenylacetyl}-3-methyl-L-valinamide, Protease
Authors:Satoh, T, Li, M, Nguyen, J, Kiso, Y, Wlodawer, A, Gustchina, A.
Deposit date:2010-01-25
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structures of inhibitor complexes of human T-cell leukemia virus (HTLV-1) protease.
J.Mol.Biol., 401, 2010
6E0G
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BU of 6e0g by Molmil
Mitochondrial peroxiredoxin from Leishmania infantum after heat stress without unfolding client protein
Descriptor: mitochondrial 2-cys-peroxiredoxin
Authors:Teixeira, F, Tse, E, Makepeace, K.A.T, Borchers, C.H, Castro, H, Tomas, A.M, Poole, L.B, Southworth, D.R, Jakob, U.
Deposit date:2018-07-06
Release date:2019-02-20
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Chaperone activation and client binding of a 2-cysteine peroxiredoxin.
Nat Commun, 10, 2019
8JHN
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BU of 8jhn by Molmil
Structure of MMF-GPR109A-G protein complex
Descriptor: (E)-4-methoxy-4-oxidanylidene-but-2-enoic acid, G protein subunit alpha o1,Guanine nucleotide-binding protein G(o) subunit alpha, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Yadav, M.K, Sarma, P, Chami, M, Banerjee, R, Shukla, A.K.
Deposit date:2023-05-24
Release date:2024-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Structure-guided engineering of biased-agonism in the human niacin receptor via single amino acid substitution.
Nat Commun, 15, 2024
3LVL
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BU of 3lvl by Molmil
Crystal Structure of E.coli IscS-IscU complex
Descriptor: Cysteine desulfurase, NifU-like protein, PYRIDOXAL-5'-PHOSPHATE
Authors:Shi, R, Proteau, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2010-02-22
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions.
Plos Biol., 8, 2010

225946

數據於2024-10-09公開中

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