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PDB: 88675 results

6N3H
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BU of 6n3h by Molmil
Crystal structure of Kelch domain of the human NS1 binding protein
Descriptor: Influenza virus NS1A-binding protein
Authors:Zhang, K, Shang, G, Padavannil, A, Fontoura, B.M.A, Chook, Y.M.
Deposit date:2018-11-15
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural-functional interactions of NS1-BP protein with the splicing and mRNA export machineries for viral and host gene expression.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6OZY
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BU of 6ozy by Molmil
Wild type GapR crystal structure 2 from C. crescentus
Descriptor: CADMIUM ION, UPF0335 protein CC_3319
Authors:Tarry, M, Harmel, C, Taylor, J.A, Marczynski, G.T, Schmeing, T.M.
Deposit date:2019-05-16
Release date:2019-11-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.014 Å)
Cite:Structures of GapR reveal a central channel which could accommodate B-DNA.
Sci Rep, 9, 2019
6P0R
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Methyltransferase domain of human suppressor of variegation 3-9 homolog 2 (SUV39H2) in complex with OTS186935 inhibitor
Descriptor: (3S)-1-[2-(5-chloro-2,4-dimethoxyphenyl)imidazo[1,2-a]pyridin-7-yl]-N-[(pyridin-4-yl)methyl]pyrrolidin-3-amine, Histone-lysine N-methyltransferase SUV39H2, UNKNOWN ATOM OR ION, ...
Authors:Halabelian, L, Dong, A, Zeng, H, Loppnau, P, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2019-05-17
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Methyltransferase domain of human suppressor of variegation 3-9 homolog 2 (SUV39H2) in complex with OTS186935 inhibitor
to be published
8CE3
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BU of 8ce3 by Molmil
Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with 3D fragment 2548
Descriptor: (3~{S})-1-ethanoyl-3-(4-methylphenyl)piperidine-3-carboxylic acid, 1,2-ETHANEDIOL, Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A, ...
Authors:Gilio, A.K, Darby, J.F, Wu, L, Davies, G.J.
Deposit date:2023-02-01
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:A Modular 3-D Fragment Collection: Design, Synthesis and Screening
To Be Published
7OC7
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LasB, alpha-alkyl-N-aryl mercaptoacetamide
Descriptor: (2R)-N,3-diphenyl-2-sulfanyl-propanamide, CALCIUM ION, Neutral metalloproteinase, ...
Authors:Koehnke, J, Sikandar, A.
Deposit date:2021-04-26
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Substrate-Inspired Fragment Merging and Growing Affords Efficacious LasB Inhibitors.
Angew.Chem.Int.Ed.Engl., 61, 2022
6N35
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BU of 6n35 by Molmil
Anti-HIV-1 Fab 2G12 + Man1-2 re-refinement
Descriptor: BENZOIC ACID, Fab 2G12 heavy chain, Fab 2G12 light chain, ...
Authors:Calarese, D.A, Stanfield, R.L, Wilson, I.A.
Deposit date:2018-11-14
Release date:2018-11-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.747 Å)
Cite:Antibody domain exchange is an immunological solution to carbohydrate cluster recognition.
Science, 300, 2003
6N42
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Crystal structure of cysteine-bound ferrous form of the crosslinked human cysteine dioxygenase in the anaerobic condition
Descriptor: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION, ...
Authors:Liu, A, Li, J.
Deposit date:2018-11-16
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Probing the Cys-Tyr Cofactor Biogenesis in Cysteine Dioxygenase by the Genetic Incorporation of Fluorotyrosine.
Biochemistry, 58, 2019
8F5G
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BU of 8f5g by Molmil
NusG-RNA complex
Descriptor: DI(HYDROXYETHYL)ETHER, RNA, Transcription termination/antitermination protein NusG
Authors:Elghondakly, A.T, Ferre-D'Amare, A.R.
Deposit date:2022-11-14
Release date:2023-11-22
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Major-groove sequence-specific RNA recognition by LoaP, a paralog of transcription elongation factor NusG.
Structure, 2024
6PH4
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BU of 6ph4 by Molmil
Full length LOV-PAS-HK construct from the LOV-HK sensory protein from Brucella abortus (light-adapted, construct 15-489)
Descriptor: Blue-light-activated histidine kinase, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Rinaldi, J, Otero, L.H, Fernandez, I, Goldbaum, F.A, Shin, H, Yang, X, Klinke, S.
Deposit date:2019-06-25
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Dimer Asymmetry and Light Activation Mechanism in Brucella Blue-Light Sensor Histidine Kinase.
Mbio, 12, 2021
7QCR
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BU of 7qcr by Molmil
MLLT4/Afadin PDZ domain in complex with the C-terminal peptide from protein E of SARS-CoV-2
Descriptor: Afadin, Envelope small membrane protein, SULFATE ION
Authors:Zhu, Y, Alvarez, F, Haouz, A, Mechaly, A, Caillet-Saguy, C.
Deposit date:2021-11-25
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Interactions of Severe Acute Respiratory Syndrome Coronavirus 2 Protein E With Cell Junctions and Polarity PSD-95/Dlg/ZO-1-Containing Proteins.
Front Microbiol, 13, 2022
6MVK
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BU of 6mvk by Molmil
HCV NS5B 1b N316 bound to Compound 18
Descriptor: (4-{(4S)-3-[5-cyclopropyl-2-(4-fluorophenyl)-3-(methylcarbamoyl)-1-benzofuran-6-yl]-2-oxo-1,3-oxazolidin-4-yl}-2-fluorophenyl)boronic acid, HCV Polymerase
Authors:Williams, S.P, Kahler, K, Price, D.J, Peat, A.J.
Deposit date:2018-10-26
Release date:2019-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design of N-Benzoxaborole Benzofuran GSK8175-Optimization of Human Pharmacokinetics Inspired by Metabolites of a Failed Clinical HCV Inhibitor.
J.Med.Chem., 62, 2019
7OFZ
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BU of 7ofz by Molmil
Nontypeable Haemophillus influenzae SapA in complex with double stranded RNA
Descriptor: ABC-type transport system, periplasmic component, involved in antimicrobial peptide resistance, ...
Authors:Lukacik, P, Owen, C.D, Nettleship, J.E, Bird, L.E, Owens, R.J, Walsh, M.A.
Deposit date:2021-05-05
Release date:2021-10-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:The structure of nontypeable Haemophilus influenzae SapA in a closed conformation reveals a constricted ligand-binding cavity and a novel RNA binding motif.
Plos One, 16, 2021
7OFW
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Nontypeable Haemophillus influenzae SapA in complex with heme
Descriptor: ABC-type transport system, periplasmic component, involved in antimicrobial peptide resistance, ...
Authors:Lukacik, P, Owen, C.D, Nettleship, J.E, Bird, L.E, Owens, R.J, Walsh, M.A.
Deposit date:2021-05-05
Release date:2021-10-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:The structure of nontypeable Haemophilus influenzae SapA in a closed conformation reveals a constricted ligand-binding cavity and a novel RNA binding motif.
Plos One, 16, 2021
6PNR
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BU of 6pnr by Molmil
A GH31 family sulfoquinovosidase from E. rectale in complex with aza-sugar inhibitor IFGSQ
Descriptor: Alpha-glucosidase, SULFATE ION, [(3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)piperidin-3-yl]methanesulfonic acid
Authors:Jarva, M.A, Lingford, J.P, John, A, Goddard-Borger, E.D.
Deposit date:2019-07-03
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A GH31 family sulfoquinovosidase from E. rectale in complex with aza-sugar inhibitor IFGSQ
To Be Published
7BHP
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BU of 7bhp by Molmil
Cryo-EM structure of the human Ebp1 - 80S ribosome
Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Desogus, J, Bhaskar, V, Chao, J.A.
Deposit date:2021-01-11
Release date:2021-02-03
Last modified:2021-03-31
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Dynamic association of human Ebp1 with the ribosome.
Rna, 27, 2021
6PPX
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BU of 6ppx by Molmil
Crystal structure of metal-free NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis in complex with malate
Descriptor: D-MALATE, N-acetylneuraminate synthase
Authors:Rosanally, A.Z, Junop, M.S, Berti, P.J.
Deposit date:2019-07-08
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:NeuNAc Oxime: A Slow-Binding and Effectively Irreversible Inhibitor of the Sialic Acid Synthase NeuB.
Biochemistry, 58, 2019
6YP7
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BU of 6yp7 by Molmil
PSII-LHCII C2S2 supercomplex from Pisum sativum grown in high light conditions
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Grinzato, A, Albanese, P, Zanotti, G, Pagliano, C.
Deposit date:2020-04-15
Release date:2020-11-25
Last modified:2020-12-02
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:High-Light versus Low-Light: Effects on Paired Photosystem II Supercomplex Structural Rearrangement in Pea Plants.
Int J Mol Sci, 21, 2020
8CMZ
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BU of 8cmz by Molmil
Crystal structure of CREBBP-R1446C histone acetyltransferase domain in complex with Coenzyme A
Descriptor: COENZYME A, ZINC ION, histone acetyltransferase
Authors:Mechaly, A.E, Zhang, W, Haouz, A, Green, M, Rodrigues-Lima, F.
Deposit date:2023-02-21
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Crystal structure of CREBBP-R1446C histone acetyltransferase domain in complex with Coenzyme A
To Be Published
8CNB
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BU of 8cnb by Molmil
Crystal structure of CREBBP-Y1503C histone acetyltransferase domain in complex with Coenzyme A
Descriptor: COENZYME A, ZINC ION, histone acetyltransferase
Authors:Mechaly, A.E, Zhang, W, Haouz, A, Green, M, Rodrigues-Lima, F.
Deposit date:2023-02-22
Release date:2024-03-06
Method:X-RAY DIFFRACTION (1.986 Å)
Cite:Crystal structure of CREBBP-Y1503C histone acetyltransferase domain in complex with Coenzyme A
To Be Published
6MRD
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BU of 6mrd by Molmil
ADP-bound human mitochondrial Hsp60-Hsp10 half-football complex
Descriptor: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ...
Authors:Gomez-Llorente, Y, Jebara, F, Patra, M, Malik, R, Nissemblat, S, Azem, A, Hirsch, J.A, Ubarretxena-Belandia, I.
Deposit date:2018-10-12
Release date:2020-04-15
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Structural basis for active single and double ring complexes in human mitochondrial Hsp60-Hsp10 chaperonin.
Nat Commun, 11, 2020
7NY6
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BU of 7ny6 by Molmil
Crystal structure of the Capsaspora owczarzaki macroH2A macrodomain
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Histone macroH2A1.1
Authors:Knobloch, G, Guberovic, I, Basquin, J, Buschbeck, M, Ladurner, A.G.
Deposit date:2021-03-21
Release date:2021-11-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Evolution of a histone variant involved in compartmental regulation of NAD metabolism.
Nat.Struct.Mol.Biol., 28, 2021
6P7I
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BU of 6p7i by Molmil
Crystal structure of Human PRMT6 in complex with S-Adenosyl-L-Homocysteine and YS17-117 Compound
Descriptor: GLYCEROL, N-[3-(4-{[(2-aminoethyl)(methyl)amino]methyl}-1H-pyrrol-3-yl)phenyl]prop-2-enamide, N-[3-(4-{[(2-aminoethyl)(methyl)amino]methyl}-1H-pyrrol-3-yl)phenyl]propanamide, ...
Authors:Halabelian, L, Dong, A, Zeng, H, Li, Y, Seitova, A, Hutchinson, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2019-06-05
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of a First-in-Class Protein Arginine Methyltransferase 6 (PRMT6) Covalent Inhibitor
J.Med.Chem., 63, 2020
7QT7
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BU of 7qt7 by Molmil
Room temperature In-situ SARS-CoV-2 MPRO with bound Z4439011520
Descriptor: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, N-(5-tert-butyl-1,2-oxazol-3-yl)-N-[(1R)-2-[(4-methoxy-2-methylphenyl)amino]-2-oxo-1-(pyridin-3-yl)ethyl]propanamide
Authors:Horrell, S, Gildae, R.J, Axford, D, Owen, C.D, Lukacik, P, Strain-Damerell, C, Owen, R.L, Walsh, M.A.
Deposit date:2022-01-14
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:xia2.multiplex: a multi-crystal data-analysis pipeline.
Acta Crystallogr D Struct Biol, 78, 2022
7O56
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BU of 7o56 by Molmil
X-ray Structure of Interferon Regulatory Factor 4 DNA binding domain bound to an interferon-stimulated response element solved by Phosphorus and Sulphur SAD methods
Descriptor: DNA (5'-D(P*AP*AP*TP*AP*AP*AP*AP*GP*AP*AP*AP*CP*CP*GP*AP*AP*AP*GP*TP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*AP*CP*TP*TP*TP*CP*GP*GP*TP*TP*TP*CP*TP*TP*TP*TP*AP*T)-3'), Interferon regulatory factor 4
Authors:El Omari, K, Agnarelli, A, Duman, R, Wagner, A, Mancini, E.J.
Deposit date:2021-04-07
Release date:2021-05-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Phosphorus and sulfur SAD phasing of the nucleic acid-bound DNA-binding domain of interferon regulatory factor 4.
Acta Crystallogr.,Sect.F, 77, 2021
6PBR
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BU of 6pbr by Molmil
Catalytic domain of E.coli dihydrolipoamide succinyltransferase in I4 space group
Descriptor: Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, SODIUM ION
Authors:Andi, B, Soares, A.S, Shi, W, Fuchs, M.R, McSweeney, S, Liu, Q.
Deposit date:2019-06-14
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the dihydrolipoamide succinyltransferase catalytic domain from Escherichia coli in a novel crystal form: a tale of a common protein crystallization contaminant.
Acta Crystallogr.,Sect.F, 75, 2019

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數據於2024-07-31公開中

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